Mercurial > repos > earlhaminst > geneseqtofamily
changeset 1:267a94f068d7 draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
author | earlhaminst |
---|---|
date | Mon, 20 Feb 2017 12:57:16 -0500 |
parents | b92f5ab6d127 |
children | 58c9294400ed |
files | GeneSeqToFamily.ga GeneSeqToFamily.png finding_orphan_genes.ga finding_orphan_genes.png |
diffstat | 4 files changed, 216 insertions(+), 179 deletions(-) [+] |
line wrap: on
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--- a/GeneSeqToFamily.ga Mon Jan 09 15:06:04 2017 -0500 +++ b/GeneSeqToFamily.ga Mon Feb 20 12:57:16 2017 -0500 @@ -12,19 +12,19 @@ "inputs": [ { "description": "", - "name": "CDS sequences" + "name": "CDS" } ], - "label": null, + "label": "CDS", "name": "Input dataset", "outputs": [], "position": { - "left": 620, - "top": 388.875 + "left": 350.0625, + "top": 418.0625 }, "tool_errors": null, "tool_id": null, - "tool_state": "{\"name\": \"CDS sequences\"}", + "tool_state": "{\"name\": \"CDS\"}", "tool_version": null, "type": "data_input", "uuid": "d2777a78-6429-47f6-9567-cb15140ace8d", @@ -44,19 +44,19 @@ "inputs": [ { "description": "", - "name": "Genes" + "name": "Gene feature information" } ], - "label": null, + "label": "Gene feature information", "name": "Input dataset", "outputs": [], "position": { - "left": 612.8125, - "top": 1110.9375 + "left": 342.875, + "top": 1140.125 }, "tool_errors": null, "tool_id": null, - "tool_state": "{\"name\": \"Genes\"}", + "tool_state": "{\"name\": \"Gene feature information\"}", "tool_version": null, "type": "data_input", "uuid": "3fbf4a09-9207-4a18-a133-0d865f9614f6", @@ -76,19 +76,19 @@ "inputs": [ { "description": "", - 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--- a/finding_orphan_genes.ga Mon Jan 09 15:06:04 2017 -0500 +++ b/finding_orphan_genes.ga Mon Feb 20 12:57:16 2017 -0500 @@ -15,12 +15,12 @@ "name": "blast_parser data" } ], - "label": null, + "label": "blast_parser data", "name": "Input dataset", "outputs": [], "position": { - "left": 199.94483947753906, - "top": 276.4521942138672 + "left": 199.9375, + "top": 276.4375 }, "tool_errors": null, "tool_id": null, @@ -47,12 +47,12 @@ "name": "CDS" } ], - "label": null, + "label": "CDS", "name": "Input dataset", "outputs": [], "position": { - "left": 195.93748474121094, - "top": 553.3639373779297 + "left": 195.921875, + "top": 553.359375 }, "tool_errors": null, "tool_id": null, @@ -69,9 +69,41 @@ ] }, "2": { + "annotation": "List of IDs discarded from hcluster_sg results", + "content_id": null, + "id": 2, + "input_connections": {}, + "inputs": [ + { + "description": "List of IDs discarded from hcluster_sg results", + "name": "hcluster_sg discarded" + } + ], + "label": "hcluster_sg discarded", + "name": "Input dataset", + "outputs": [], + "position": { + "left": 191, + "top": 697 + }, + "tool_errors": null, + "tool_id": null, + "tool_state": "{\"name\": \"hcluster_sg discarded\"}", + "tool_version": null, + "type": "data_input", + "uuid": "3866a37f-3309-4c5d-8ed9-bb7c21d25d8a", + "workflow_outputs": [ + { + "label": null, + "output_name": "output", + "uuid": "f9fe709d-8a1b-44b0-9989-688af44b16ad" + } + ] + }, + "3": { "annotation": "", "content_id": "Cut1", - 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