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view test-data/Mus_pahari.PAHARI_EIJ_v1.1.cds.all.shortened.fa @ 11:dbe37a658cd2 draft

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"planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gstf_preparation commit 133a11e7195f8da83c5b661d8babb3f6d9e18812"
author earlhaminst
date Sun, 27 Sep 2020 18:54:31 +0000
parents e8e75a79de59
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>MGP_PahariEiJ_T0009933.1 cds chromosome:PAHARI_EIJ_v1.1:13:62596741:62626623:1 gene:MGP_PahariEiJ_G0008413.1 gene_biotype:polymorphic_pseudogene transcript_biotype:protein_coding gene_symbol:Atp10d description:ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
AAGACAAATGGCTGGCTTGGAAGCGTAACTCTCACCGCCCTTTGGATCCCTGCTCGCTTC
TCTTTTGGCACTTTGGGATCCGAGGTAACCATGCGGTGATGAGCGGCCCGGGAGGGACAG
ATCACCTGAACCAGCCGGGTCTCCCTGCGTCTTGGACATGACTGAGCTTCTGCAGTGGGC
CAGACATCACTGGCGTCGGCTGAGCCATGGGAGAACCCAGGGTGAAGATGAGAGGCCGTA
CAACTACGCCTCCCTGCTGGCCTGTGGGGGCAAGTCCCCCCGGACCCCCAGGCCTGCAGG
AAAGCACCGTGTCGTTATTCCTCACCTTCAGTGCTTCAGGGATGAGTACGAGAGGTTTTC
TGGAACCTACGTGAATAACCGGATACGGACGACCAAGTACACACTCCTGAACTTTGTGCC
AAGGAACTTATTTGAACAGTTTCACAGGGCTGCCAATTTATATTTCCTGTTCCTCGTGGT
CCTGAACTGGGTGCCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATGCTGCCTCTGGT
GGTGGTCCTCACAATTATTGCAATTAAAGATGGCTTGGAAGACTACCGGAAGTACAAAAT
TGACAAGCAGATCAACAACTTAATAACCAAGGTTTACAGTAGG
>MGP_PahariEiJ_T0009934.1 cds chromosome:PAHARI_EIJ_v1.1:13:62596741:62686932:1 gene:MGP_PahariEiJ_G0008413.1 gene_biotype:polymorphic_pseudogene transcript_biotype:polymorphic_pseudogene gene_symbol:Atp10d description:ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
AAGACAAATGGCTGGCTTGGAAGCGTAACTCTCACCGCCCTTTGGATCCCTGCTCGCTTC
TCTTTTGGCACTTTGGGATCCGAGGTAACCATGCGGTGATGAGCGGCCCGGGAGGGACAG
ATCACCTGAACCAGCCGGGTCTCCCTGCGTCTTGGACATGACTGAGCTTCTGCAGTGGGC
CAGACATCACTGGCGTCGGCTGAGCCATGGGAGAACCCAGGGTGAAGATGAGAGGCCGTA
CAACTACGCCTCCCTGCTGGCCTGTGGGGGCAAGTCCCCCCGGACCCCCAGGCCTGCAGG
AAAGCACCGTGTCGTTATTCCTCACCTTCAGTGCTTCAGGGATGAGTACGAGAGGTTTTC
TGGAACCTACGTGAATAACCGGATACGGACGACCAAGTACACACTCCTGAACTTTGTGCC
AAGGAACTTATTTGAACAGTTTCACAGGGCTGCCAATTTATATTTCCTGTTCCTCGTGGT
CCTGAACTGGGTGCCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATGCTGCCTCTGGT
GGTGGTCCTCACAATTATTGCAATTAAAGATGGCTTGGAAGACTACCGGAAGTACAAAAT
TGACAAGCAGATCAACAACTTAATAACCAAGGTTTACAGTAGGACTCTGAAGTTGATCCT
GAGAAGTTCTCCAGTAGGATAGAATGTGAAAGCCCAAACAATGACCTCAGCAGATTCCGA
GGTTTCCTGGAACATGCCAATAAAGACCGTGTGGGCCTCAGCAAAGAGAATTTATTGCTC
CGCGGGTGCACCATCAGAAACACAGAGGCTGTGGTGGGCATTGTGGTCTATGCAGGTCAT
GAAACCAAAGCAATGCTGAACAACAGTGGGCCACGGTATAAGCGCAGTAAGTTAGAGAGA
AGAGCAAATACAGACGTCCTCTGGTGTGTCCTGCTTCTGATCGTCATGTGCTTAACTGGT
GCACTGGGTCACGGCATATGGCTGAGCAGGTATGAGAACATGCTCTTTTTTAACATCCCT
GAGCCGGACGGACGTGTCCTATCACCTGTGCTGACTGGGTTCTATGTGTTCTGGACCATG
ATCATCTTGCTGCAGGTCCTGATCCCCATTTCTCTCTACGTGTCCATTGAGATCGTGAAG
CTGGGACAGATCTATTTCATCCAGAGCGATGTAGATTTCTACAACGAGAAAATGGATTCG
ACCATTCAGTGCCGAGCCCTAAACATCACTGAGGACCTTGGGCAGATTCAATACCTCTTT
TCTGATAAGACAGGAACCCTCACAGAGAATAAGATGGTGTTTCGGAGGTGCAGTGTAGCA
GGGTTTGACTACTGCCATGAAGAAAACGCCAGGAGGCTCGAGTCCTATCAGGAAGCTGTC
TCTGAAGAGGAGGAACGCGCAGACACTCTCGGCGGCTCCCTCAGCAACGTGGCGAGACCC
AGAGCCCAGGGCTGCAGGACAGTTCACAGTGGGCTTCCGGGAAAACCCCCGGCTCACCTC
TCCGGGAGCACCTCTGCTGTAGGAGACGCAGAAGGATCCGGGGAAGTGCCTCATTCCAGA
CAGGCTGCCTTCAGTAGTCCCATGGAAACAGACGTGGTACCAGATACCAGACTTTTAGAC
AAATTTAGCCAGATTACCCCTCAGCTGCTCACTGGACTGGATGGGACCTTGCAGAGCTCA
TCACTGGAGACCTTGTACATCATGGACTTCTTTATTGCACTGGCAATTTGCAACACGGTG
GTGGTTTCTGCCCCAAACCAACCTCGGCAAAAGATTGGGCTCTCCTCACTGGGTGGAATG
CCCATCAAGTCCTTGGACGAGATTAAAAACATCTTCCAGAAATTGTCTGTCCGGAGATCA
AGTTCACCATCCCTTGCCAGCGGGAAGGATTCATCCTCTGGGACTCCCTGTGCCTTTGTG
AGCAGAATCTCTTTCTTTAGTCGACCAAAACTGTCACCTCCTATGGAGGACGAGTCTTCC
CAAATGGATGAAATCCCCCAGGCCAGTAACTCAGCTTGCTGTACAGAAACGGAGGCACAA
AACAGTGCCTTAGGACTCAGCGTCGGCTCCGCGGAAGCCCTAAATGGACCACCGCCCTTG
GCTTCCAACCTGTGTTATGAGGCGGAGAGTCCAGATGAAGCAGCCTTGGTGTATGCCGCC
AGAGCTTATCATTGCACTTTACAGTCTCGGACCCCAGAGCAGGTCATGGTGGAGTTTGCA
GCTTTGGGCTCATTAACATTTCAACTCCTACACATCCTGCCCTTTGACTCAGTAAGGAAA
AGAATGTCGGTGGTGGTCCGGCACCCTCTTTCCAAACAAGTCGTGGTGTATACAAAAGGC
GCTGATTCCGTGATCATGGAGCTGCTGTCTATGGCTTCCTCGGATGGAACAAATCTGGAA
GAACAACAGATGATAATAAGGGAGAGAACGCAGAGGCACCTGGACGAGTATGCCAGACGA
GGGCTGCGCACTCTGTGTGTTGCAAAGAAGGTCATGAGTGACACGGAATATGCAGAGTGG
CTGAGGAATCACTTCCTAGCTGAAACCAGCATTGACAACAGGGAGGAGCTGCTAGTTGAG
TCTGCCATGAGACTAGAAAACAAACTCACGTTACTTGGTGCTACTGGCATTGAAGATCGT
CTGCAGGAGGGGGTCCCTGAGTCTATAGAAGCCCTTCACCAAGCTGGCATCAAGATCTGG
ATGCTGACAGGGGACAAGCAGGAGACAGCTGTCAACATAGCTTATGCATGCAGACTCCTG
GAACCAGATGACAAGCTCTTCATCCTCAATACACAAAGTGAGGATGCCTGTGGGATGCTG
ATGAGTGCAATTTTGGAAGAACTTCAGAAGAGAGCTCAGGTGTCTCCGGAGCTGGCATCA
CCAAGAAAGAACTTTCCTCAGCCCCCTGACCCTCAGGGCCAGGGACGTGCGGGACTTGTT
ATCACTGGGAAGAGCCTGGAGTTTGCCCTGCAGGAGAGTCTACAAAGACAGTTCCTTGAG
CTGACTGCATGGTGCCAAGCTGTGATCTGCTGCCGAGCCACCCCCCTTCAAAAGAGTGAG
GTGGTGAAATTGGTTCGAAACCATCTCCATGTGATGACCCTAGCCATTGGTGACGGTGCC
AATGATGTTAGCATGATACAAGTGGCTGACATTGGGATCGGTGTCTCAGGTCAAGAAGGC
ATGCAGGCTGTGATGGCCAGTGACTTCGCCATCTCTCAGTTCAGACATCTCAGCAAGCTT
CTCCTCGTGCACGGGCACTGGTGTTACACCCGGCTCTCCAACATGATTCTCTATTTTTTC
TACAAGAATGTGGCCTATGTGAATCTCCTTTTCTGGTACCAGTTCTTTTGTGGGTTTTCA
GGAACATCGATGACTGACTACTGGGTGCTGATCTTCTTCAACCTCCTCTTCACATCTGTC
CCCCCCATCATTTATGGCGTTTTGGAGAAAGATGTGTCAGCAGAGACCCTCCTGCAGCTG
CCTGAACTTTACCGGAGTGGTCAGCGATCAGAGGAATACTTGCCCGTCACTTTCTGGATC
ACCTTGTTGGATGCCTTTTATCAAAGCCTGGTCTGCTTCTTTGTGCCTTACTTTACCTAC
CAGGGCTCTGACATTGACATCTTTACCTTTGGGAATCCCCTGAACACGGCGGCTCTGTTC
ATCATTCTCCTCCACCTGGTGATCGAAAGCAAGAGTTTGACTTGGATCCACATGCTGGTC
ATTGTTGGGAGCATCTTGTCCTACTTTTTCTTTGCCTTGGCTTTTGGAGCCTTATGTGTC
ACTTGCAACCCACCCTCCAACCCCTACGGGATCATGCAGAAGCACATGCTAGACCCTGTG
TTCTACTTAGTTTGTGTTCTTACAACCTTCGTAGCACTCCTGCCCAGGTTTGCCTACCGA
GTTCTTCAGGGATCCATGTTTCCATCTCCAGTTCTCAGAGCCAAGTACTTTGACCGACTA
CCTCCAGAGGAGAGAGCTGAAGCTCTCAAGAGGTGGAGAGGGACTGCAAAGATCAATCAC
GTGGCATCTCAGCATGCCAGCCAATCAGCTGCTAAGTCAGGAAGACCCACGCCTGGGTCT
TCTGCTGTCCTTGCAATGAAGACAGCAACAGTGCGTACTGTTGAGCAGAGCACATGTGAA
ACTGCGCTAGACCATGGCTGCTCTGAACCTGGGGCCTCCAGGACGACTGGACCCTCAGCA
AGT
>MGP_PahariEiJ_T0009938.1 cds chromosome:PAHARI_EIJ_v1.1:13:62671962:62686918:1 gene:MGP_PahariEiJ_G0008413.1 gene_biotype:polymorphic_pseudogene transcript_biotype:protein_coding gene_symbol:Atp10d description:ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
ATGACTGACTACTGGGTGCTGATCTTCTTCAACCTCCTCTTCACATCTGTCCCCCCCATC
ATTTATGGCGTTTTGGAGAAAGATGTGTCAGCAGAGACCCTCCTGCAGCTGCCTGAACTT
TACCGGAGTGGTCAGCGATCAGAGGAATACTTGCCCGTCACTTTCTGGATCACCTTGTTG
GATGCCTTTTATCAAAGCCTGGTCTGCTTCTTTGTGCCTTACTTTACCTACCAGGGCTCT
GACATTGACATCTTTACCTTTGGGAATCCCCTGAACACGGCGGCTCTGTTCATCATTCTC
CTCCACCTGGTGATCGAAAGCAAGAGTTTGACTTGGATCCACATGCTGGTCATTGTTGGG
AGCATCTTGTCCTACTTTTTCTTTGCCTTGGCTTTTGGAGCCTTATGTGTCACTTGCAAC
CCACCCTCCAACCCCTACGGGATCATGCAGAAGCACATGCTAGACCCTGTGTTCTACTTA
GTTTGTGTTCTTACAACCTTCGTAGCACTCCTGCCCAGGTTTGCCTACCGAGTTCTTCAG
GGATCCATGTTTCCATCTCCAGTTCTCAGAGCCAAGTACTTTGACCGACTACCTCCAGAG
GAGAGAGCTGAAGCTCTCAAGAGGTGGAGAGGGACTGCAAAGATCAATCACGTGGCATCT
CAGCATGCCAGCCAATCAGCTGCTAAGTCAGGAAGACCCACGCCTGGGTCTTCTGCTGTC
CTTGCAATGAAGACAGCAACAGTGCGTACTGTTGAGCAGAGCACATGTGAAACTGCGCTA
GACCATGGCTGCTCTGAACCTGGGGCCTCCAGGACGACTGGACCCTCAGCAAGT