diff test-data/hiera_RDP.txt @ 0:478e767a0e7a draft

"planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/lotus2 commit d05728af3d4d2ffd49548a320e8e8b4c6cc2f5e7"
author earlhaminst
date Thu, 13 May 2021 17:38:45 +0000
parents
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hiera_RDP.txt	Thu May 13 17:38:45 2021 +0000
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+domain	phylum	class	order	family	genus	species	OTU
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU1
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Porphyromonadaceae	Parabacteroides	?	OTU2
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Duncaniella	?	OTU3
+Bacteria	Firmicutes	Bacilli	Lactobacillales	Lactobacillaceae	Lactobacillus	?	OTU4
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Bacteroidaceae	Phocaeicola	?	OTU5
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Prevotellaceae	?	?	OTU6
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU7
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU8
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU9
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU10
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Paramuribaculum	?	OTU11
+Bacteria	Campilobacterota	Campylobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	?	OTU12
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU13
+Bacteria	?	?	?	?	?	?	OTU14
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU15
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Bacteroidaceae	Bacteroides	?	OTU16
+Bacteria	Verrucomicrobia	Verrucomicrobiae	Verrucomicrobiales	Akkermansiaceae	Akkermansia	?	OTU17
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Acetatifactor	?	OTU18
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU19
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU20
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU21
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Lachnospira	?	OTU22
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU23
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Rikenellaceae	Alistipes	?	OTU24
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU25
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU26
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU27
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Muribaculum	?	OTU28
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU29
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Duncaniella	?	OTU30
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU31
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Oscillibacter	?	OTU32
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU33
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU34
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Enterocloster	?	OTU35
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU36
+Bacteria	Proteobacteria	Deltaproteobacteria	Desulfovibrionales	Desulfovibrionaceae	Mailhella	?	OTU37
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU38
+Bacteria	Proteobacteria	Alphaproteobacteria	?	?	?	?	OTU39
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU40
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU41
+Bacteria	Firmicutes	Bacilli	Lactobacillales	Lactobacillaceae	Limosilactobacillus	?	OTU42
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Bacteroidaceae	Bacteroides	?	OTU43
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU44
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU45
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Rikenellaceae	Alistipes	?	OTU46
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU47
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Dysosmobacter	?	OTU48
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU49
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Duncaniella	?	OTU50
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU51
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Rikenellaceae	Alistipes	?	OTU52
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Butyricicoccus	?	OTU53
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU54
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU55
+Bacteria	Proteobacteria	Betaproteobacteria	Burkholderiales	Sutterellaceae	?	?	OTU56
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU57
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU58
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU59
+Bacteria	Tenericutes	Mollicutes	Anaeroplasmatales	Anaeroplasmataceae	Anaeroplasma	?	OTU60
+Bacteria	Firmicutes	Clostridia	?	?	?	?	OTU61
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Flintibacter	?	OTU62
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU63
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU64
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Bacteroidaceae	Bacteroides	?	OTU65
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU66
+Bacteria	Firmicutes	Bacilli	Lactobacillales	Lactobacillaceae	Ligilactobacillus	?	OTU67
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU68
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU69
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Bacteroidaceae	Bacteroides	?	OTU70
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU71
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Prevotellaceae	?	?	OTU72
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU73
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU74
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU75
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU76
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Paramuribaculum	?	OTU77
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU78
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU79
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU80
+Bacteria	Firmicutes	Clostridia	Clostridiales	?	?	?	OTU81
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU82
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU83
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Intestinimonas	?	OTU84
+Bacteria	Proteobacteria	Deltaproteobacteria	Desulfovibrionales	Desulfovibrionaceae	?	?	OTU85
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Clostridium XlVb	?	OTU86
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	?	?	?	OTU87
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU88
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Anaerotignum	?	OTU89
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Blautia	?	OTU90
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU91
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Paramuribaculum	?	OTU92
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU93
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU94
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU95
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Acetatifactor	?	OTU96
+Bacteria	Proteobacteria	Alphaproteobacteria	?	?	?	?	OTU97
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Duncaniella	?	OTU98
+Bacteria	Proteobacteria	Deltaproteobacteria	Desulfovibrionales	Desulfovibrionaceae	Mailhella	?	OTU99
+Bacteria	Firmicutes	Erysipelotrichia	Erysipelotrichales	Erysipelotrichaceae	Amedibacillus	?	OTU100
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Duncaniella	?	OTU101
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU102
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Paramuribaculum	?	OTU103
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Oscillibacter	?	OTU104
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Acutalibacter	?	OTU105
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Duncaniella	?	OTU106
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU107
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU108
+Bacteria	Firmicutes	Clostridia	?	?	?	?	OTU109
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Oscillibacter	?	OTU110
+Bacteria	Deferribacteres	Deferribacteres	Deferribacterales	Deferribacteraceae	Mucispirillum	?	OTU111
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU112
+Bacteria	Proteobacteria	Betaproteobacteria	Burkholderiales	Sutterellaceae	Turicimonas	?	OTU113
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU114
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Phocea	?	OTU115
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Kineothrix	?	OTU116
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU117
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU118
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU119
+Bacteria	Proteobacteria	Deltaproteobacteria	Desulfovibrionales	Desulfovibrionaceae	Mailhella	?	OTU120
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Enterocloster	?	OTU121
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU122
+Bacteria	Proteobacteria	Betaproteobacteria	Burkholderiales	Sutterellaceae	Parasutterella	?	OTU123
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU124
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU125
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU126
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU127
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU128
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU129
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU130
+Bacteria	Firmicutes	Clostridia	Clostridiales	?	?	?	OTU131
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Neglecta	?	OTU132
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU133
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	Acetatifactor	?	OTU134
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU135
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU136
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Anaerotruncus	?	OTU137
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU138
+Bacteria	Proteobacteria	Gammaproteobacteria	Xanthomonadales	Xanthomonadaceae	Stenotrophomonas	?	OTU139
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU140
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU141
+Bacteria	Proteobacteria	Gammaproteobacteria	Enterobacterales	Morganellaceae	Proteus	?	OTU142
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	?	?	?	OTU143
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU144
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU145
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU146
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU147
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU148
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU149
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Acutalibacter	?	OTU150
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU151
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU152
+Bacteria	Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	?	?	OTU153
+Bacteria	Firmicutes	Clostridia	Clostridiales	?	?	?	OTU154
+Bacteria	Firmicutes	Clostridia	Clostridiales	?	?	?	OTU155
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU156
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU157
+Bacteria	Proteobacteria	Deltaproteobacteria	Desulfovibrionales	?	?	?	OTU158
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU159
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU160
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU161
+Bacteria	Firmicutes	Clostridia	Clostridiales	?	?	?	OTU162
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU163
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU164
+Bacteria	Firmicutes	Clostridia	Clostridiales	?	?	?	OTU165
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU166
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Odoribacteraceae	Odoribacter	?	OTU167
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU168
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU169
+Bacteria	Proteobacteria	Betaproteobacteria	Burkholderiales	Comamonadaceae	Ottowia	?	OTU170
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU171
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Paramuribaculum	?	OTU172
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	Duncaniella	?	OTU173
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Porphyromonadaceae	Parabacteroides	?	OTU174
+Bacteria	Firmicutes	Clostridia	Clostridiales	?	?	?	OTU175
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Muribaculaceae	?	?	OTU176
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU177
+Bacteria	Bacteroidetes	?	?	?	?	?	OTU178
+?	?	?	?	?	?	?	OTU179
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU180
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU181
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU182
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU183
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU184
+Bacteria	Bacteroidetes	Bacteroidia	Bacteroidales	Rikenellaceae	?	?	OTU185
+Bacteria	Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	?	?	OTU186
+Bacteria	Proteobacteria	Deltaproteobacteria	Desulfovibrionales	Desulfovibrionaceae	?	?	OTU187