Mercurial > repos > earlhaminst > replace_chromosome_names

comparison replace_chromosome_names.xml @ 1:6c0373cc070f draft default tip

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/replace_chromosome_names/ commit c8418d1d7657dacae7f81fe4aa0aba051873d4ad
author earlhaminst
date Tue, 13 Jun 2017 14:43:07 -0400
parents 97c11d04cd4c
children
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0:97c11d04cd4c 1:6c0373cc070f
26 <param name="input" ftype="vcf" value="gemini_load_input.vcf" /> 26 <param name="input" ftype="vcf" value="gemini_load_input.vcf" />
27 <param name="cols" value="1" /> 27 <param name="cols" value="1" />
28 <param name="mapping" ftype="tabular" value="GRCh37_ensembl2UCSC.txt" /> 28 <param name="mapping" ftype="tabular" value="GRCh37_ensembl2UCSC.txt" />
29 <param name="comment_char" value="#" /> 29 <param name="comment_char" value="#" />
30 <output name="output" ftype="vcf" file="replace_chromosome_names_output.vcf" /> 30 <output name="output" ftype="vcf" file="replace_chromosome_names_output.vcf" />
31 <assert_stderr>
32 <has_text text="HG1007_PATCH" />
33 </assert_stderr>
31 </test> 34 </test>
32 </tests> 35 </tests>
33 <help><![CDATA[ 36 <help><![CDATA[
34 **What it does** 37 **What it does**
35 38