# HG changeset patch # User earlhaminst # Date 1481817865 18000 # Node ID 794a6e864a96206f80099a9ad7c42ba9a480debd planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/t_coffee commit 230ae552ddeb1bfdef3a09becaa5c6d373529a05-dirty diff -r 000000000000 -r 794a6e864a96 filter_by_fasta_ids.py --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/filter_by_fasta_ids.py Thu Dec 15 11:04:25 2016 -0500 @@ -0,0 +1,108 @@ +#!/usr/bin/env python +""" A script to build specific fasta databases """ +from __future__ import print_function + + +import logging +import sys + + +# ===================================== Iterator =============================== +class Sequence: + ''' Holds protein sequence information ''' + def __init__(self): + self.header = "" + self.sequence_parts = [] + + def get_sequence(self): + return "".join([line.rstrip().replace('\n', '').replace('\r', '') for line in self.sequence_parts]) + + +class FASTAReader: + """ + FASTA db iterator. Returns a single FASTA sequence object. + """ + def __init__(self, fasta_name): + self.fasta_file = open(fasta_name) + self.next_line = self.fasta_file.readline() + + def __iter__(self): + return self + + def __next__(self): + ''' Iteration ''' + # while True: + # line = self.fasta_file.readline() + # if not line: + # raise StopIteration + # if line[0] == '>': + # break + next_line = self.next_line + if not next_line: + raise StopIteration + + seq = Sequence() + seq.header = next_line.rstrip().replace('\n', '').replace('\r', '') + + next_line = self.fasta_file.readline() + while next_line and next_line[0] != '>': + # tail = self.fasta_file.tell() + # line = self.fasta_file.readline() + # if not line: + # break + # if line[0] == '>': + # self.fasta_file.seek(tail) + # break + seq.sequence_parts.append(next_line) + next_line = self.fasta_file.readline() + self.next_line = next_line + return seq + + # Python 2/3 compat + next = __next__ +# ============================================================================== + + +def target_match(target, search_entry): + ''' Matches ''' + search_entry = search_entry.upper() + for atarget in target: + if search_entry.find(atarget) > -1: + return atarget + return None + + +def main(): + ''' the main function''' + logging.basicConfig(filename='filter_fasta_log', + level=logging.INFO, + format='%(asctime)s :: %(levelname)s :: %(message)s',) + + used_sequences = set() + work_summary = {'wanted': 0, 'found': 0, 'duplicates': 0} + targets = [] + + f_target = open(sys.argv[1]) + for line in f_target.readlines(): + targets.append(">%s" % line.strip().upper()) + f_target.close() + + work_summary['wanted'] = len(targets) + homd_db = FASTAReader(sys.argv[2]) + + # output = open(sys.argv[3], "w") + for entry in homd_db: + target_matched_results = target_match(targets, entry.header) + if target_matched_results: + work_summary['found'] += 1 + targets.remove(target_matched_results) + sequence = entry.get_sequence() + used_sequences.add(sequence) + print(entry.header) + print(sequence) + for parm, count in work_summary.items(): + logging.info('%s ==> %d', parm, count) + + +if __name__ == "__main__": + main() diff -r 000000000000 -r 794a6e864a96 t_coffee.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/t_coffee.xml Thu Dec 15 11:04:25 2016 -0500 @@ -0,0 +1,210 @@ + + multiple sequence alignment + + t_coffee + + + + + + t_coffee -version | grep Version + + + '$cigar' + #end if +]]> + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 'cigar' in outputs + + + 'clustalw_aln' in outputs + + + 'dnd' in outputs + + + 'fasta_aln' in outputs + + + 'fasta_seq' in outputs + + + 'msf_aln' in outputs + + + 'phylip' in outputs + + + 'pir_aln' in outputs + + + 'pir_seq' in outputs + + + 'score_ascii' in outputs + + + 'score_html' in outputs + + + + + + + + + + + + + + + + + + + + +**What it does** + +This tool is a wrapper for the T-Coffee multiple sequence alignment suite. The input is a set of sequences in FASTA format. Apart from running on the complete FASTA input, it can also run on a subset of sequences by providing a list of the FASTA IDs. + +This wrapper offers selected advanced T-Coffee options like the selection of the alignment methods to use: ''Pairwise Structual Method'', ''Multiple Sequence Alignment Methods'' or ''Pairwise Sequence Alignment Methods''. + +The T-Coffee documentation can be found at http://www.tcoffee.org/Projects/tcoffee/ . + +**Example** + +Suppose you have 5 sequences in FASTA format:: + + >1aboA + NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPS + NYITPVN + >1ycsB + KGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGY + VPRNLLGLYP + >1pht + GYQYRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIG + WLNGYNETTGERGDFPGTYVEYIGRKKISP + >1vie + DRVRKKSGAAWQGQIVGWYCTNLTPEGYAVESEAHPGSVQIYPVAALERI + N + >1ihvA + NFRVYYRDSRDPVWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRD + +By selecting "Yes" in output fasta_aln in the wrapper, the user will obtain the multiple alignment in FASTA format:: + + >1aboA + NL-FVA---LYDFVASGDNTLSITKGEKLR-------VLGYN-------H + NGEWCEA--QTKN-GQGWVPSNYIT------PVN + >1ycsB + KGVIYA---LWDYEPQNDDELPMKEGDCMT-------IIHREDE-----D + EIEWWWA--RLND-KEGYVPRNLLG------LYP + >1pht + GYQYRA---LYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPE + EIGWLNGYNETTG-ERGDFPGTYVEYIGRKKISP + >1vie + DR-----------VRK--KSGAAWQGQIVGWYCTNLTPEGYAVE------ + ------S--EAHPGSVQIYPVAALE------RIN + >1ihvA + NF-RVYYRDSRDPVWKGPA-KLLWKGEGAV-------VIQDN-------S + DI--------------KVVPRRKAK-----IIRD + + + 10.1006/jmbi.2000.4042 + + diff -r 000000000000 -r 794a6e864a96 t_coffee_to_cigar.pl --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/t_coffee_to_cigar.pl Thu Dec 15 11:04:25 2016 -0500 @@ -0,0 +1,48 @@ +#!/usr/bin/perl +# +use strict; +use warnings; + +# A simple Perl script to convert FASTA sequence alignments into 2-column output where first column is FASTA id and second is CIGAR line +# TCoffee_to_cigar.pl + +sub convert_and_print { + my ($header, $sequence) = @_; + # Converts each match into M and each gap into D + $sequence =~ s/[^-]/M/g; + $sequence =~ s/-/D/g; + + # Split the sequence in substrings composed by the same letter + $sequence =~ s/DM/D,M/g; + $sequence =~ s/MD/M,D/g; + my @cigar_array = split(',', $sequence); + + # Condense each substring, e.g. DDDD in 4D, and concatenate them again + my $cigar = ''; + foreach my $str (@cigar_array) { + if (length($str) > 1) { + $cigar .= length($str); + } + $cigar .= substr($str, 0, 1); + } + print "$header\t$cigar\n"; +} + +my $file1 = $ARGV[0]; +open my $fh1, '<', $file1; + +my $header = '', my $sequence = ''; +while (my $line = <$fh1>) { + chomp $line; + if (substr($line, 0, 1) eq '>') { + if ($header) { + convert_and_print($header, $sequence); + } + $header = substr($line, 1); + $sequence = ''; + } else { + $sequence .= $line; + } +} +close $fh1; +convert_and_print($header, $sequence); diff -r 000000000000 -r 794a6e864a96 test-data/cigar.tabular --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/cigar.tabular Thu Dec 15 11:04:25 2016 -0500 @@ -0,0 +1,3 @@ +ENSMUST00000091291_musmusculus 41M3D64MD473MD7M2D375M3D74M3D771M2D13MD227MD13M7D226M3D58M3D6MD21M3D437M2D33MD76MD1017M12D34M10D14M3D22M4D10M4D107M +ENSCAFT00000026349_canisfamiliaris 16D26M2D64MD422MD8M2D140M3D195M2D5M8D16M5D52M3D61M6D6M3D672M20D24MD311M8D25M2D58M2D11M2D103M5D17M6D18M5D22M2D10MD37M3D499M3D10M4D30M5D12M4D35M5D6M10D904M4D27M6D40M8D16M3D21M126D +ENSRNOT00000019267_rattusnorvegicus 75MD14M6D112M6D317MD8M2D40MD7M2D273M4D23M3D16M5D794M3D6M18D315M2D7MD46M2D249MD335M3D142M2D8MD8M2D14MD35MD63M5D16M3D16M4D10M6D1152M3D diff -r 000000000000 -r 794a6e864a96 test-data/ids.txt --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/ids.txt Thu Dec 15 11:04:25 2016 -0500 @@ -0,0 +1,3 @@ +ENSMUST00000091291_musmusculus +ENSCAFT00000026349_canisfamiliaris +ENSRNOT00000019267_rattusnorvegicus diff -r 000000000000 -r 794a6e864a96 test-data/input.fasta --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/input.fasta Thu Dec 15 11:04:25 2016 -0500 @@ -0,0 +1,14 @@ +>ENSMUST00000091291_musmusculus +ATGGGCTTCGGGAGAGGATGTGAGACGACGGCTGTGCCATTGCTGGTGGCCGTGGCCGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTGGAGAGGTGTGCCCTGGTATGGACATCCGGAACAACCTGACCAGGCTACATGAGCTGGAGAACTGCTCAGTCATTGAGGGCCATCTGCAGATCCTCCTGATGTTCAAGACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATCATGATCACAGATTACCTGCTTCTCTTCCGTGTCTATGGTCTGGAAAGTCTGAAAGACCTCTTCCCAAATCTCACAGTCATCCGAGGCTCCCGTCTCTTCTTCAACTATGCCCTGGTTATCTTCGAGATGGTCCACCTGAAGGAGCTGGGGCTTTATAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGAGAAGAATAATGAGCTCTGCTACCTGGCCACTATCGACTGGTCCCGTATCCTGGATTCTGTGGAGGACAACTACATTGTACTGAACAAAGATGACAACGAGGAATGTGGGGATGTCTGTCCAGGCACCGCCAAGGGCAAGACCAACTGTCCTGCCACTGTCATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACAGTCATTGTCAGAAAGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACAGCTGAAGGCCTGTGCTGCCACAAAGAGTGCCTGGGCAACTGTTCGGAACCTGATGACCCCACCAAGTGTGTGGCCTGTCGCAACTTCTATCTGGATGGTCAGTGTGTGGAGACCTGCCCGCCACCCTACTATCACTTCCAGGACTGGCGCTGTGTGAACTTCAGCTTCTGCCAAGACCTTCACTTCAAATGCAGGAACTCTCGGAAGCCTGGCTGCCACCAATACGTCATTCACAACAATAAGTGCATCCCCGAGTGCCCGTCTGGCTATACCATGAATTCCAGCAACTTGATGTGCACCCCATGTCTGGGACCCTGCCCTAAGGTCTGCCAAATCCTCGAAGGTGAGAAGACCATTGATTCTGTGACATCTGCCCAGGAGCTCCGAGGCTGCACTGTGATCAACGGTAGCCTGATCATCAACATCCGAGGGGGCAACAACCTGGCAGCTGAGCTGGAGGCTAACCTTGGCCTCATTGAAGAAATTTCGGGATTTCTAAAGATCCGCCGCTCCTATGCTCTGGTATCACTTTCTTTCTTCAGGAAGCTACATCTGATTCGAGGAGAGACCTTGGAAATTGGGAACTATTCTTTTTATGCCTTGGACAACCAGAACCTGAGGCAACTCTGGGACTGGAGCAAACACAACCTCACCATCACTCAGGGCAAGCTCTTCTTCCATTACAACCCGAAACTCTGCTTGTCTGAAATTCACAAGATGGAAGAAGTCTCCGGAACTAAGGGCCGTCAGGAGAGGAACGACATTGCCCTGAAGACCAATGGGGACCAGGCATCGTGTGAAAATGAATTGCTTAAATTTTCTTTCATTCGGACATCTTTTGACAAGATCCTGTTGAGGTGGGAACCCTACTGGCCCCCCGACTTCCGAGATCTCCTGGGATTCATGTTGTTCTACAAAGAGGCCCCTTATCAGAATGTGACAGAGTTTGATGGGCAGGATGCTTGTGGCTCCAACAGCTGGACTGTGGTGGATATTGACCCGCCCCAGAGGTCCAACGACCCCAAGTCTCAGACCCCAAGCCACCCTGGGTGGCTGATGCGGGGCCTCAAACCCTGGACCCAATACGCCATCTTTGTGAAGACCTTGGTTACCTTCTCTGATGAACGGCGGACCTATGGAGCCAAAAGTGATATCATCTATGTGCAAACAGATGCCACTAATCCTTCTGTCCCCCTGGATCCCATATCAGTTTCTAATTCCTCATCTCAGATTATCTTAAAGTGGAAGCCCCCCTCTGACCCCAATGGCAACATCACACACTACCTGGTGTACTGGGAGAGGCAAGCAGAGGACAGCGAGCTGTTTGAGCTGGATTATTGTCTCAAAGGGCTGAAGCTCCCTTCACGGACCTGGTCCCCACCCTTTGAGTCTGATGATTCTCAGAAGCACAATCAGAGTGAGTATGACGACTCGGCCAGTGAGTGCTGCTCATGCCCTAAGACTGACTCTCAGATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCTTCGAGGATTACCTGCACAACGTGGTTTTTGTCCCCAGGCCATCCCGAAAGCGAAGATCCCTTGAAGAGGTGGGGAATGTGACAGCCACCACACTCACACTTCCAGATTTCCCCAACGTCTCCTCTACCATTGTGCCCACAAGTCAGGAGGAGCACAGGCCATTTGAGAAAGTGGTGAACAAGGAGTCACTTGTCATCTCTGGCCTGAGACACTTCACTGGGTACCGCATTGAGCTGCAGGCATGCAATCAAGATTCCCCAGATGAGAGGTGCAGTGTGGCTGCCTACGTCAGTGCCCGGACCATGCCTGAAGCTAAGGCAGATGACATCGTTGGCCCTGTGACTCATGAAATCTTTGAGAACAATGTTGTACACTTAATGTGGCAAGAGCCAAAGGAACCTAATGGTCTGATTGTGCTATATGAAGTGAGCTATCGCCGATATGGTGATGAGGAGCTGCACCTCTGTGTCTCCCGGAAGCATTTTGCCCTGGAGCGGGGCTGCAGGCTGCGAGGGCTCTCCCCAGGAAACTACAGTGTTCGAGTCCGGGCTACCTCTCTGGCAGGAAATGGCTCCTGGACAGAACCCACCTATTTTTATGTGACTGATTATTTAGATGTCCCATCAAATATTGCCAAAATTATCATTGGACCCCTCATCTTTGTCTTCCTCTTCAGTGTTGTGATTGGAAGTATTTATCTATTTCTGAGAAAGAGGCAGCCGGATGGGCCAATGGGACCACTGTATGCATCTTCAAACCCTGAGTACCTCAGTGCCAGTGATGTGTTTCCATCTTCTGTGTACGTGCCGGACGAGTGGGAGGTGCCTCGAGAGAAGATCACCCTTCTTCGAGAGCTGGGGCAGGGATCCTTTGGTATGGTGTATGAAGGCAATGCCAAGGATATCATCAAGGGTGAGGCAGAGACCCGTGTTGCGGTTAAGACTGTCAATGAGTCAGCCAGTCTTCGAGAACGGATCGAGTTCCTCAATGAGGCATCAGTCATGAAGGGATTCACCTGCCATCATGTGGTCCGCCTTCTTGGGGTGGTATCCAAAGGACAGCCAACGCTGGTAGTGATGGAATTGATGGCTCATGGAGACCTGAAAAGTCACCTCCGTTCTCTGAGGCCAGATGCTGAGAATAACCCAGGCCGCCCTCCCCCTACCTTGCAAGAAATGATTCAGATGACAGCAGAAATTGCTGATGGCATGGCATACTTGAACGCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGAAACTGCATGGTTGCCCATGATTTTACTGTCAAAATTGGAGACTTTGGAATGACAAGGGACATCTACGAGACAGATTACTATCGGAAAGGGGGCAAGGGACTGCTTCCTGTGAGGTGGATGTCACCTGAGTCCCTGAAGGATGGAGTCTTTACTGCTTCTTCTGATATGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACTAGCCTGGCTGAGCAACCTTATCAAGGCCTGTCTAATGAACAGGTGTTGAAGTTTGTCATGGATGGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTCACTGACCTGATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAGGCCAACCTTCCTGGAAATCGTCAACCTGCTCAAGGATGACCTCCACCCCAGCTTTCCAGAAGTTTCCTTCTTCTACAGCGAGGAGAACAAGGCTCCTGAGAGTGAGGAGCTGGAGATGGAGTTTGAAGACATGGAGAATGTCCCGTTGGATCGTTCCTCTCACTGTCAGAGAGAAGAGGCTGGGGGCCGGGAGGGAGGGTCCTCACTGAGCATCAAACGGACCTATGATGAACACATCCCCTATACCCACATGAATGGGGGCAAGAAGAACGGACGTGTCCTTACCCTGCCAAGGTCAAACCCTTCCTAA + +>ENSCAFT00000026349_canisfamiliaris +ATGGCAGTGCCCAGTCTGTGCCCATGGGTCGCATGCCTGCTGGTGATCCTCCTCTCCTTGGGATTTGGCCTGGACACACTAGAGGTGTGCCCCAGCCTGGACATCCGCTCAGAGGTGGCGGAGCTGCGCCGGCTGGAGAACTGCAGCGTGGTGGAGGGCCATCTGCAGATCCTGCTCATGTTCACGGCCACGGGCGAGGACTTCCGCGGCCTCAGCTTCCCGCGCCTCACTCAGGTCACTGACTACCTGCTGCTCTTCCGCGTGTATGGCCTGGAGAGCCTGCGGGACCTCTTCCCCAACCTCGCGGTCGTGCGTGGCGCCCGCCTCTTCCTGGGTTATGCGCTGGTGGTCTACGAGATGCCGCACCTGCGGGACGTGGGGCTGCCGGCGCTGGGGGCCGTGCTGCGTGGGGCCGTGCGGGTGGAGAAGAACCAGGAGCTCTGTCATCTCTCCACCATCGACTGGGGGCTGCTGCAGCCCTCGCCCAGCGCCAACCACATCGTGGGCAACAAGCTGCGTGAGGAGTGTGCCGACGTGTGCCCTGGTGTGCTGGGTGCCACCGGCCAGCCCTGCGCCAGGACCACCTTCAGTGGGCACACCGACTACAGATGCTGGACCTCCAGCCACTGCCAGAGAGTGTGTCCCTGCCCCCATGGGCTGGCCTGCACAGCTGGGGGTGAGTGCTGCCACACTGAATGCCTGGGGGGCTGCAGCCGGCCGGAAGACCCCCGCGCCTGCGTCGCCTGTCGCCACCTCTACTTCCAGGGTGCCTGCCACCGGGCCTGCCCTCCAGGCACCTACCAGCACGAGTCCTGGCGCTGTGTCACGGCAGAGCGCTGTGCCAGCCTGCGCTCTGTGCCCGGCCGCACCTCCATCTTTGGCATCCACGAGGGCAGCTGCCTGGCCCAGTGCCCTCCGGGCTTCACCCGCAACGGCAGCAGCATGTTCTGCCACAAGTGTGAGGGGCTGTGCCCCAAAGAGTGCAAGGTGGGTACCAAGACCATCGACTCCACGCAGGCGGCACAGGACCTGGCGGGCTGCACCCACGTGGAGGGGAGCCTCATCATCAACCTCCGCCAGGGCTACAACCTAGAGCTGGAGCTGCAACAGAGCCTGGGGCTGATAGAGACCATCACTGGCTTCCTCAAGATCAAGCACTCCTTTGCCCTCGTGTCCCTGGGCTTTTTCAAGAACCTCAAACTCATCCGAGGGGACGCCATGGTGGATGGGAACTACACCCTGTATGTGCTGGACAACCAGAACCTACAGCAGCTGGGGGCCTGGGTGGCTGCGGGGCTCACCATTCCCGTGGGCAAGATATACTTCGCTTTCAACCCTCGCCTCTGCTTGGAGCACATCTACCGCCTGGAAGAGGTGACCGGCACGCGGGGACGGCAAAACAAGGCTGAGATCAACCCCCGCACCAACGGAGACCGCGCCGCCTGCCAAACTCGCACCCTGCGCTTCGTGTCCAACGTGACGCAAGCTGACAGCATCTTGCTGCGCTGGGAGCGCTACGAGCCGCTGGAGGCTCGGGACCTGCTCAGCTTCATCGTGTACTACAAGGAGTCCCCATTCCAGAATGCCACAGAGCACACAGGTCCAGATGCCTGTGGAACCCAGAGCTGGAACCTGCTGGATGTGGAGCTGCCCTTAAGCCGCACCCAAGAACCCGGGGTAACTCTAGCACCCCTCAAGCCCTGGACACAATATGCAGTGTTTGTACGGGCCATCACACTGACCACTGCTGAGGACAGCCCCCACCAAGGAGCCCAGAGCCCCATCGTCTACCTCCGAACCCTGCCTGCGGCGCCCACTGTGCCCCAGGACGTCATCTCCACGTCCAATTCCTCGTCCCACCTGCTCGTGCGCTGGAAGCCACCGATTCAGCGCAACGGGAACATCACCTACTACCTGGTGCTGTGGCAGCGTCTGGCGGAGGACGGCGACCTCTATCTCAACGACTACTGCCACCGCGGCCTGCGGCTGCCCACCAGCAACAACGACCCGCGCTTCGACCGCGAGGACGGTGAACTCGAAGCCGAGATGGAGCCGGGCTGCTGCCCTTGCCAGCACCCACCGCCTGGGCAGGTCCTGCCGCCGCTGGAGGCGCAAGAGGCCTCGTTCCAGAAGAAGTTCGAAAACTTCCTGCACAACGCCATCACCATCCCCAAGTCCCCCTGGAAGGTGACGTCCGTCAATAAGAGCCCTCAAAGACATGCGGGGAGGCACCGCCGGGCGGCCGGGGCGCTCCGGCTTGGGGGCAACAGCTCGGATTTCGAGATCCAGGAGGACAAAGTGCCCCGGGAGCGAGCAGTGTTGAGTGGTCTGCGCCACTTTACGGAATATCGTATCGACATCCACGCCTGCAACCACGCGGCTCACACCGTGGGCTGCAGCGCGGCCACGTTCGTCTTCGCGCGCACCATGCCGCACAGAGAAGCTGATGGCATCCCAGGGAAGGTGGCCTGGGAGGCAGCCAGCAAAAGCAGTGTCCTCCTGCGCTGGCTGGAGCCACCTGACCCCAACGGACTCATCCTCAAGTATGAAATCAAGTACCGCCGCTTGGGAGAGGAGGCCACAGTGCTATGTGTGTCCCGCCTACGATATGCCAAATTTGGGGGTGTCCAGCTGGCCCTGCTGCCCCCTGGAAACTACTCCGCCAGAGTTCGGGCAACCTCGCTGGCTGGCAACGGCTCCTGGACAGAAAGTATCGCTTTCTACGTCCCAGGCCCAGAGGAGGAAGACTCCGGGGGGCTGCACGTCCTTCTCACTGTCACCCCCGTGGGGCTCATGCTGTTCATCATTCTTGCCGCCCTCGGTTTCTTCTACGGCAGGAAGAGAAACAGCACCCTCTATGCCTCAGTGAATCCGGAGTACTTCAGCGCCTCTGATATGTACATCCCTGATGAGTGGGAGGTGCCTCGGGAGCAGATCTCCATAATCCGAGAGCTGGGCCAGGGCTCCTTTGGGATGGTATATGAAGGCCTGGCACAAGGACTAGAGGCTGGAGAGGAGTCCACACCCGTGGCCCTGAAGACAGTGAATGAGTTGGCCAGCCCACGAGAACGCATTGAGTTCCTCAAGGAAGCTTCTGTCATGAAGGCATTCAAGTGTCACCATGTGGTACGTCTCCTGGGTGTTGTGTCTCAAGGCCAGCCAACTCTGGTCATCATGGAGTTAATGACTCGTGGGGACCTCAAGAGCCATCTTCGATCTCTGCGGCCTGAGGCAGAGAACAACCCTGGGCTCCCACGGCCAGCACTGGGAGATATGATCCAGATGGCTGGTGAGATTGCAGATGGCATGGCTTACCTCGCTGCCAACAAGTTTGTGCATCGAGACCTGGCAGCCAGAAACTGCATGGTGTCCCAGGACTTCACCGTCAAGATTGGGGACTTCGGGATGACTCGAGACGTGTACGAGACAGACTATTACCGCAAGGGCGGGAAAGGGCTGCTGCCCGTGCGCTGGATGGCCCCCGAGTCCCTCAAAGATGGAATCTTCACCACACATTCGGATGTTTGGTCCTTCGGGGTGGTGCTCTGGGAGATCGTGACCCTAGCTGAACAGCCCTACCAGGGTTTATCCAACGAGCAGGTGCTCAAGTTTGTCATGGATGGTGGGGTCCTGGAGGAGCTGGAGAGCTGTCCCCTTCAGCTGCAAGAACTGATGAGCCGCTGCTGGCAGCAGAACCCACGCCTGCGGCCCACCTTCACCCACATCCTGGACAGCATTCGGGGGGAACTGCGGCCCTCTTTCCGCCTCTTTTCCTTCTATTACAGCCCAGAGTGCCAGGGGAGCCAGGGGGCCCTGCTGCCTAATGCCAAACCCAACTCCCTACCAACCCCAGAAGGGGCTCCCTCAGACTGCATGCCCCAAAATGGGGGTCCAGGGCACTGA + +>ENSMUST00000005671_homosapiens +ATGAAGTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGGGGGCTCGTGTTTCTCTCCGCCGCGCTCTCTCTCTGGCCGACGAGTGGAGAAATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGCAGCTGAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGCTCATCTCCAAGGCCGAGGACTACCGAAGCTACCGCTTCCCCAAGCTCACCGTCATCACTGAGTACTTGCTGCTCTTCCGAGTCGCTGGCCTCGAGAGCCTGGGAGACCTCTTCCCCAACCTCACAGTCATCCGTGGCTGGAAACTCTTCTACAACTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGATATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGAGAAGAACGCCGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCTTGGATGCGGTGTCCAATAACTACATTGTGGGGAACAAGCCCCCGAAGGAATGTGGGGACCTGTGTCCAGGGACATTGGAGGAGAAGCCCATGTGTGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAAATCGCTGCCAGAAAATGTGCCCAAGTGTGTGCGGGAAGCGAGCCTGCACCGAGAACAACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACCGGACGACAACACAACCTGCGTGGCCTGCAGACACTACTACTACAAAGGCGTGTGTGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGCTGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGACTCGGATGGCTTCGTTATCCACGACGATGAGTGCATGCAGGAGTGTCCCTCAGGCTTCATCCGCAACAGCACCCAGAGCATGTACTGTATCCCCTGCGAAGGCCCCTGCCCCAAAGTCTGCGGCGATGAAGAGAAGAAAACGAAAACCATCGATTCGGTGACTTCTGCTCAAATGCTCCAAGGATGCACCATCCTGAAGGGCAATCTGCTTATTAACATCCGGAGAGGCAATAACATTGCCTCGGAGTTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACCGGCTACGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTGAAGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTGGAAGGGAACTACTCCTTCTATGTCCTAGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAACCACCGGAACCTGACCGTCAGGTCCGGAAAGATGTACTTTGCTTTCAATCCCAAGCTGTGTGTCTCCGAAATTTACCGCATGGAGGAAGTGACCGGAACCAAGGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTCCACCACGACCTGGAAGAACCGAATCATCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGATCTCATCAGCTTCACAGTTTACTACAAGGAGGCACCATTTAAAAACGTTACGGAATATGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTGGATGTAGACCTGCCTCCGAACAAGGAGGGCGAGCCTGGCATTTTACTGCATGGGCTGAAGCCCTGGACCCAGTATGCTGTCTATGTCAAGGCTGTGACCCTCACCATGGTGGAAAACGACCATATCCGTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAATGCTTCAGTCCCTTCCATTCCCCTAGATGTCCTCTCAGCATCAAACTCTTCCTCTCAGCTGATTGTGAAGTGGAATCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACATTGTGAGGTGGCAGCGGCAGCCCCAGGATGGTTACCTGTACCGGCACAACTACTGCTCCAAAGACAAAATACCCATCAGAAAGTACGCCGATGGTACCATCGACGTGGAGGAGGTGACGGAAAATCCCAAGACAGAAGTGTGTGGTGGTGATAAAGGGCCATGCTGCGCTTGCCCTAAAACTGAAGCTGAGAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATTTCCTTCACAATTCCATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCACGGTAGCTGACACCTACAATATCACAGACCCGGAGGAGTTCGAGACAGAGTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATCTCCAACCTCCGGCCTTTCACTCTGTACCGCATCGATATCCACAGCTGCAACCACGAGGCTGAGAAGCTGGGCTGCAGCGCCTCCAACTTCGTCTTTGCGAGAACCATGCCAGCAGAAGGAGCAGATGATATCCCTGGTCCGGTGACCTGGGAGCCAAGACCCGAAAACTCCATCTTTTTAAAGTGGCCAGAACCCGAGAACCCCAACGGATTGATCCTAATGTATGAAATTAAATACGGGTCGCAAGTCGAGGATCAGCGGGAATGTGTGTCCAGACAGGAGTACAGGAAGTACGGAGGGGCCAAACTCAACCGTCTAAACCCAGGGAACTATACAGCCCGGATTCAGGCTACCTCCCTCTCTGGGAATGGGTCATGGACAGATCCTGTGTTCTTCTATGTCCCCGCCAAAACGACGTATGAGAACTTCATGCATCTGATCATTGCTCTGCCGGTTGCCATCCTGCTGATCGTTGGGGGGCTGGTTATCATGCTGTATGTCTTCCATAGAAAGAGAAATAACAGCAGGTTGGGCAATGGAGTGCTGTATGCTTCTGTGAACCCCGAGTATTTCAGCGCAGCTGATGTGTACGTGCCTGATGAATGGGAGGTAGCTCGAGAGAAGATCACCATGAACCGGGAGCTCGGACAAGGGTCCTTTGGGATGGTCTATGAAGGAGTGGCCAAGGGTGTGGTCAAGGATGAACCCGAAACCAGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGTATGCGTGAAAGAATCGAGTTTCTCAACGAGGCCTCGGTGATGAAGGAGTTCAATTGTCACCATGTGGTCCGGTTGCTGGGTGTGGTATCCCAAGGCCAGCCCACCCTGGTCATCATGGAACTAATGACACGCGGTGATCTCAAAAGTTATCTCCGGTCTCTGAGGCCAGAAGTGGAGCAGAATAATCTAGTCCTCATTCCTCCGAGCTTAAGCAAGATGATCCAGATGGCTGGAGAGATTGCAGATGGCATGGCCTACCTCAATGCCAACAAGTTCGTCCACAGAGACCTTGCTGCTAGGAACTGCATGGTAGCCGAAGATTTCACAGTCAAAATTGGAGATTTCGGTATGACACGAGACATCTACGAGACGGACTACTACCGGAAAGGCGGGAAGGGGTTGCTGCCTGTGCGCTGGATGTCTCCCGAGTCCCTCAAGGATGGTGTCTTCACTACTCATTCTGATGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACGCTGGCTGAGCAGCCCTACCAGGGCTTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAGGGTGGCCTTCTGGACAAGCCGGACAACTGCCCTGATATGCTGTTTGAACTTATGCGCATGTGCTGGCAGTATAACCCCAAGATGCGGCCCTCCTTCCTGGAGATCATCGGCAGCATCAAGGATGAGATGGAGCCCAGCTTCCAGGAGGTCTCCTTCTACTACAGCGAGGAGAACAAGCCTCCCGAGCCAGAGGAGCTGGAGATGGAGCCTGAGAACATGGAGAGCGTCCCACTGGACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGGACACAAGGCTGAGAATGGCCCGGGCCCTGGCGTGCTCGTTCTCCGCGCCAGTTTTGATGAGAGACAGCCTTACGCTCACATGAACGGGGGACGCGCCAACGAGAGGGCCTTGCCTCTGCCCCAGTCCTCGACCTGCTGA + +>ENSRNOT00000019267_rattusnorvegicus +ATGAAGTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGGGGGCTCGTGTTTCTCTCCGCCGCGCTCTCGCTCTGGCCGACGAGTGGAGAAATTTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGCAGCTGAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGCTCATCTCCAAGGCCGAGGACTACCGAAGCTACCGCTTCCCCAAGCTCACGGTCATCACCGAGTACTTGCTGCTGTTTCGAGTGGCCGGCCTCGAGAGCCTGGGAGACCTCTTCCCGAACCTCACAGTCATCCGTGGCTGGAAACTCTTCTACAATTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGATATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGAGAAAAACGCTGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCTTGGATGCGGTGTCCAATAACTACATTGTGGGGAACAAGCCCCCAAAGGAATGTGGGGACCTGTGTCCAGGGACCTTGGAGGAGAAGCCCATGTGTGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAAATCGCTGCCAGAAAATGTGCCCAAGTGTGTGTGGGAAGCGAGCCTGCACCGAGAACAATGAGTGCTGCCACCCGGAGTGCCTAGGCAGCTGCCACACACCGGACGACAACACAACCTGCGTGGCCTGCCGACACTACTACTACAAAGGCGTGTGCGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGCTGTGTGGACCGGGATTTCTGCGCCAACATCCCCAACGCCGAGAGCAGTGACTCAGATGGCTTCGTCATCCACGATGGCGAGTGCATGCAGGAGTGTCCATCAGGCTTCATCCGCAACAGCACCCAGAGCATGTACTGTATCCCCTGTGAAGGCCCCTGCCCCAAGGTCTGCGGCGATGAAGAAAAGAAAACGAAAACCATCGATTCTGTGACGTCTGCCCAGATGCTCCAAGGGTGCACCATTTTGAAGGGCAATCTGCTTATTAACATCCGGCGAGGCAATAACATTGCCTCGGAATTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACTGGCTACGTGAAGATCCGCCATTCCCATGCCTTGGTCTCCTTGTCCTTCCTGAAGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAACTACTCCTTCTATGTCCTGGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAACCACCGGAACCTGACCGTCAGGTCAGGGAAAATGTACTTCGCTTTCAATCCCAAGCTGTGTGTCTCTGAAATTTACCGGATGGAGGAGGTGACAGGAACAAAGGGACGGCAGAGCAAAGGAGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTCCACCACCACCTGGAAGAACCGCATCATCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGATCTCATCAGTTTCACAGTCTACTACAAGGAGGCACCCTTTAAAAACGTCACGGAATACGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTGGACGTGGACCTGCCTCCGAACAAGGAGGGGGAGCCTGGCATTTTGCTGCATGGGCTGAAGCCCTGGACCCAGTATGCAGTCTATGTCAAGGCTGTGACCCTCACCATGGTGGAAAACGACCACATCCGTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAACGCTTCAGTTCCTTCCATTCCTCTAGATGTCCTCTCGGCATCAAACTCCTCCTCTCAGCTGATCGTGAAGTGGAACCCCCCAACTCTGCCCAATGGTAACTTGAGTTACTACATTGTGAGGTGGCAGCGGCAGCCGCAGGATGGCTATCTGTTCCGGCACAACTACTGCTCCAAAGACAAAATACCCATCAGAAAGTACGCCGATGGTACCATCGATGTGGAGGAGGTGACAGAAAATCCCAAGACAGAAGTGTGCGGTGGTGATAAAGGGCCGTGCTGTGCCTGTCCTAAAACCGAAGCTGAGAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATTTCCTTCACAACTCCATCTTTGTGCCCAGACCTGAGAGGAGGCGGAGAGATGTCCTGCAGGTGGCTAACACCACCATGTCCAGCCGAAGCAGGAACACCACGGTAGCTGACACCTACAATATCACAGACCCGGAAGAGTTCGAGACAGAATACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATTTCCAACCTCCGGCCTTTCACTCTGTACCGTATCGATATCCACAGCTGCAACCACGAGGCTGAGAAGCTGGGCTGCAGCGCCTCCAACTTTGTCTTTGCAAGAACCATGCCAGCAGAAGGAGCAGATGACATTCCTGGCCCAGTGACCTGGGAGCCAAGACCTGAAAACTCCATCTTTTTAAAGTGGCCAGAACCCGAGAACCCCAACGGATTGATTCTAATGTATGAAATAAAATACGGATCGCAAGTCGAGGATCAGCGGGAATGTGTGTCCAGACAGGAGTACAGGAAGTATGGAGGGGCCAAACTTAACCGTCTAAACCCAGGGAACTATACGGCCCGGATTCAGGCTACCTCCCTCTCTGGGAATGGGTCGTGGACAGATCCTGTGTTCTTCTATGTCCCAGCCAAAACAACGTATGAGAATTTCATGCATCTGATCATTGCTCTGCCGGTTGCCATCCTGCTGATTGTGGGGGGCCTGGTAATCATGCTGTATGTCTTCCATAGAAAGAGGGTGTCTGGGCCAGCAGAAGGCAGTAGTTGGAAAGGGCCATTTCCATCCTGTCTGTTCCTAGTGTACGTGCCTGATGAATGGGAGGTAGCTCGGGAGAAGATCACCATGAACCGGGAGCTCGGACAAGGGTCCTTCGGGATGGTCTATGAAGGAGTGGCCAAGGGCGTGGTCAAGGACGAGCCTGAAACCAGAGTGGCCATCAAGACAGTGAATGAGGCTGCAAGTATGCGTGAGAGAATTGAGTTTCTCAACGAGGCCTCAGTGATGAAGGAGTTCAACTGTCACCATGTGGTCCGGTTGCTGGGTGTAGTATCCCAAGGCCAGCCCACCCTGGTCATCATGGAACTAATGACACGTGGCGATCTCAAAAGTTATCTCCGGTCTCTAAGGCCAGAGGTGGAGAATAATCTAGTCCTGATTCCTCCGAGCTTAAGCAAGATGATCCAGATGGCTGGAGAGATTGCAGATGGCATGGCCTACCTCAATGCCAACAAGTTCGTCCACAGAGACCTGGCTGCTCGGAACTGCATGGTAGCTGAAGATTTCACAGTCAAAATTGGAGATTTTGGTATGACACGAGACATCTACGAGACGGACTACTACCGGAAAGGCGGGAAGGGCTTGCTGCCTGTGCGCTGGATGTCTCCCGAGTCCCTCAAGGATGGCGTCTTCACCACTCATTCCGATGTCTGGTCCTTTGGGGTCGTCCTCTGGGAGATCGCCACTCTGGCTGAGCAGCCGTACCAGGGCCTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAGGGCGGCCTTCTGGACAAGCCGGATAACTGCCCCGATATGCTGTTTGAACTTATGCGCATGTGCTGGCAGTACAACCCCAAGATGCGGCCCTCCTTCCTGGAGATCATCGGAAGCATCAAGGATGAGATGGAGCCCAGTTTCCAGGAGGTCTCCTTCTACTACAGCGAGGAGAACAAGCCTCCAGAGCCGGAGGAGCTGGAGATGGAGCTGGAGCTGGAGCCCGAGAACATGGAGAGCGTCCCGCTGGACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGGACACAAGGCTGAGAACGGCCCTGGCGTGCTGGTTCTCCGTGCCAGTTTTGATGAGAGACAGCCTTACGCTCACATGAATGGGGGACGCGCCAACGAGAGGGCCTTGCCTCTGCCCCAGTCCTCAACCTGC + +>ENSPTRT00000013802_pantroglodytes +ATGAAGTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGGGGGCTCCTGTTTCTCTCCGCCGCGCTCTCGCTCTGGCCGACGAGTGGAGAAATCTGCGGGCCAGGCATCGACATCCGCAACGACTATCAGCAGCTGAAGCGCCTGGAGAACTGCACGGTGATCGAGGGCTACCTCCACATCCTGCTCATCTCCAAGGCCGAGGACTACCGCAGCTACCGCTTCCCCAAGCTCACGGTCATTACCGAGTACTTGCTGCTGTTCCGAGTGGCTGGCCTCGAGAGCCTCGGAGACCTCTTCCCCAACCTCACGGTCATCCGCGGCTGGAAACTCTTCTACAACTACGCCCTGGTCATCTTCGAGATGACCAATCTCAAGGATATTGGGCTTTACAACCTGAGGAACATTACTCGGGGGGCCATCAGGATTGAGAAAAATGCTGACCTCTGTTACCTCTCCACTGTGGACTGGTCCCTGATCCTGGATGCGGTGTCCAATAACTACATTGTGGGGAATAAGCCCCCAAAGGAATGTGGGGACCTGTGTCCAGGGACCATGGAGGAGAAGCCGATGTGTGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAAACCGCTGCCAGAAAATGTGCCCGAGCACGTGTGGGAAGCGGGCGTGCACCGAGAACAACGAGTGCTGCCACCCCGAGTGCCTGGGCAGCTGCAGCGCGCCTGACAACGACACGGCCTGTGTAGCTTGCCGCCACTACTACTATGCCGGTGTCTGTGTGCCTGCCTGCCCGCCCAACACCTACAGGTTTGAGGGCTGGCGCTGTGTGGACCGTGACTTCTGCGCCAACATCCTCAGCGCCGAGAGCAGCGACTCCGAGGGGTTTGTGATCCACGACGGCGAGTGCATGCAGGAGTGCCCCTCGGGCTTCATCCGCAACGGCAGCCAGAGCATGTACTGCATCCCTTGTGAAGGTCCTTGCCCGAAGGTCTGTGAGGAAGAAAAGAAAACAAAGACCATTGATTCTGTTACTTCTGCTCAGATGCTCCAAGGATGCACCATCTTCAAGGGCAATTTGCTCATTAACATCCGACGGGGGAATAACATTGCTTCAGAGCTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACGGGCTACGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTAAAAAACCTTCGCCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAATTACTCCTTCTACGTCCTCGACAACCAGAACTTGCAGCAACTATGGGACTGGGACCACCGCAACCTGACCATCAAAGCAGGGAAAATGTACTTTGCTTTCAATCCCAAATTATGTGTTTCCGAAATTTACCGCATGGAGGAAGTGACGGGGACTAAAGGGCGCCAAAGCAAAGGGGACATAAACACCAGGAACAACGGGGAGAGAGCCTCCTGTGAAAGTGACGTCCTGCATTTCACCTCCACCACCACGTCGAAGAATCGCATCATCATAACCTGGCACCGGTACCGGCCCCCTGACTACAGGGATCTCATCAGCTTCACCGTTTACTACAAGGAAGCACCCTTTAAGAATGTCACGGAGTATGATGGGCAGGACGCCTGCGGCTCCAACAGCTGGAACATGGTGGACGTGGACCTCCCGCCCAACAAGGACGTGGAGCCCGGCATCTTACTACATGGGCTGAAGCCCTGGACTCAGTACGCCGTTTACGTCAAGGCTGTGACCCTCACCATGGTGGAGAATGACCATATCCGTGGGGCCAAGAGTGAGATCTTGTACATTCGCACCAATGCTTCAGTTCCTTCCATTCCCTTGGACGTTCTTTCAGCATCGAACTCCTCTTCTCAGTTAATCGTGAAGTGGAACCCTCCCTCTCTGCCCAACGGCAACCTGAGTTACTACATTGTGCGCTGGCAGCGGCAGCCTCAGGACGGCTACCTTTACCGGCACAATTACTGCTCCAAAGACAAAATCCCCATCAGGAAGTATGCCGACGGCACCATCGACATTGAGGAGGTCACAGAGAACCCCAAGACTGAGGTGTGTGGTGGGGAGAAAGGGCCTTGCTGCGCCTGCCCCAAAACTGAAGCCGAGAAGCAGGCCGAGAAGGAGGAGGCTGAATACCGCAAAGTCTTTGAGAATTTCCTGCACAACTCCATCTTCGTGCCCAGACCTGAAAGGAAGCGGAGAGATGTCATGCAAGTGGCCAACACCACCATGTCCAGCCGAAGCAGGAACACCACGGCCGCAGACACCTACAACATCACCGACCCGGAAGAGCTGGAGACAGAGTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGAACTGTGATTTCTAACCTTCGGCCTTTCACATTGTACCGCATCGATATCCACAGCTGCAACCACGAGGCTGAGAAGCTGGGCTGCAGCGCCTCCAACTTTGTCTTTGCAAGGACTATGCCCGCAGAAGGAGCAGATGACATTCCTGGGCCAGTGACCTGGGAGCCAAGGCCTGAAAACTCCATCTTTTTAAAGTGGCCGGAACCTGAGAATCCCAATGGATTGATTCTAATGTATGAAATAAAATACGGATCACAAGTTGAGGATCAGCGAGAATGTGTGTCCAGACAGGAATACAGGAAGTATGGAGGGGCCAAGCTAAACCGGCTAAACCCGGGGAACTACACAGCCCGGATTCAGGCCACATCTCTCTCTGGGAATGGGTCGTGGACAGATCCTGTGTTCTTCTATGTCCAGGCCAAAACAGGATATGAAAACTTCATCCATCTGATCATCGCTCTGCCCGTCGCTGTCCTGTTGATCGTGGGAGGGTTGGTGATTATGCTGTACGTCTTCCATAGAAAGAGAAATAACAGCAGGCTGGGGAATGGAGTGCTGTATGCCTCTGTGAACCCGGAGTACTTCAGCGCTGCTGATGTGTACGTTCCCGATGAGTGGGAGGTGGCTCGGGAGAAGATCACCATGAGCCGGGAACTTGGGCAGGGGTCCTTTGGGATGGTCTATGAAGGAGTTGCCAAGGGTGTGGTGAAAGATGAACCTGAAACCAGAGTGGCCATTAAAACAGTGAACGAGGCCGCAAGCATGCGTGAAAGGATTGAGTTTCTCAACGAAGCTTCTGTGATGAAGGAGTTCAATTGTCACCATGTGGTGCGATTGCTGGGTGTGGTGTCCCAAGGCCAGCCAACACTGGTCATCATGGAACTGATGACACGGGGCGATCTCAAAAGTTATCTCCGGTCTCTGAGGCCAGAAATGGAGAATAATCCAGTCCTAGCACCTCCAAGCCTGAGCAAGATGATTCAGATGGCCGGAGAGATTGCAGACGGCATGGCATACCTCAACGCCAATAAGTTCGTCCACAGAGACCTTGCTGCCCGGAATTGCATGGTAGCCGAAGATTTCACAGTCAAAATCGGAGATTTTGGTATGACGCGAGATATCTATGAGACAGACTATTACCGGAAAGGAGGGAAAGGGCTGCTGCCCGTGCGCTGGATGTCTCCCGAGTCCCTCAAGGATGGAGTCTTCACCACTTACTCGGACGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACACTGGCCGAGCAGCCCTACCAGGGCTTGTCCAACGAGCAAGTCCTTCGCTTCGTCATGGAGGGCGGCCTTCTGGACAAGCCAGACAACTGTCCCGACATGCTGTTTGAACTGATGCGCATGTGCTGGCAGTATAACCCCAAGATGAGGCCTTCCTTCCTGGAGATCATCAGCAGCATCAAAGAGGAGATGGAGCCTGGCTTCCGGGAGGTCTCCTTCTACTACAGCGAGGAGAACAAGCTGCCCGAGCCGGAGGAGCTGGACCTGGAGCCAGAGAACATGGAGAGCGTCCCCCTGGACCCCTCGGCCTCCCTGCCACTGCCCGACAGACACTCAGGACACAAGGCCGAGAACGGCCCCGGCCCTGGGGTGCTGGTCCTCCGCGCCAGCTTCGACGAGAGACAGCCGTACGCACACATGAACGGGGGCCGCAAGAACGAGCGGGCCTTGCCGCTGCCCCAGTCTTCGACCTGCTGA diff -r 000000000000 -r 794a6e864a96 test-data/output1.fasta --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/output1.fasta Thu Dec 15 11:04:25 2016 -0500 @@ -0,0 +1,425 @@ +>ENSMUST00000091291_musmusculus +ATGGGCTTCGGGAGAGGATGTGAGACGACGG-CTGTGCCATTGCTGGTGG +CCGTGGCCGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTGGAGAG +GTGTGC---CCTGGTATGGACATCCGGAACAACCTGACCAGGCTACATGA +GCTGGAGAACTGCTCAGTCATTGAGGGCCATCTGCAGATCCTCCTGATGT +TCAAGACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAACTCATC +ATGATCACAGATTACCTGCTTCTCTTCCGTGTCTATGGTCTGGAAAGTCT +GAAAGACCTCTTCCCAAATCTCACAGTCATCCGAGGCTCCCGTCTCTTCT +TCAACTATGCCCTGGTTATCTTCGAGATGGTCCACCTGAAGGAGCTGGGG +CTTTATAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGAGAAGAA +TAATGAGCTCTGCTACCTGGCCACTATCGACTGGTCCCGTATCCTGGATT +CTGTGGAGGACAACTACATTGTACTGAACAAAGATGACAACGAGGAATGT +GGGGATGTCTGTCCAGGCACCGCCAAGGGCAA-GACCA--ACTGTCCTGC +CACTGTCATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACAGTCATT +GTCAGAAAGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACAGCTGAA +GGCCTGTGCTGCCACAAAGAGTGCCTGGGCAACTGTTCGGAACCTGATGA +CCCCACCAAGTGTGTGGCCTGTCGCAACTTCTATCTGGATGGTCAGTGTG +TGGAGACCTGCCCGCCACCCTACTATCACTTCCAGGACTGGCGCTGTGTG +AACTTCAGCTTCTGCCAAGACCTTCACTTCAAATGCAGGAACTCTCGGAA +GCCTGGCTGCCACCAATACGTCATTCACAACAATAAGTGCATCCCCGAGT +GCCCGTCTGGCTATACCATGAATTCCAGC---AACTTGATGTGCACCCCA +TGTCTGGGACCCTGCCCTAAGGTCTGCCA-AATCCTCGAAGGTGA--GAA +GACCATTGATTCTGTGACATCTGCCCAGGAGCTCCGAGGCTGCACTGTGA +TCAACGGTAGCCTGATCATCAACATCCGAGGGGGCAACAACCTGGCAGCT +GAGCTGGAGGCTAACCTTGGCCTCATTGAAGAAATTTCGGGATTTCTAAA +GATCCGCCGCTCCTATGCTCTGGTATCACTTTCTTTCTTCAGGAAGCTAC +ATCTGATTCGAGGAGAGACCTTGGAAATTGGGAACTATTCTTTTTATGCC +TTGGACAACCAGAACCTGAGGCAACTCTGGGACTGGAGCAAACACAACCT +CACCATCACTCAGGGCAAGCTCTTCTTCCATTACAACCCGAAACTCTGCT +TGTCTGAAATTCACAAGATGGAAGAAGTCTCCGGAACTAAGGGCCGTCAG +GAGAGGAACGACATTGCCCTGAAGACCAATGGGGACCAGGCATCGTGTGA +AAATGAATTGCTTAAATTTTCTTTCATTCGGACATCTTTTGACAAGATCC +TGTTGAGGTGGGAACCCTACTGGCCCCCCGACTTCCGAGATCTCCTGGGA +TTCATGTTGTTCTACAAAGAGGCCCCTTATCAGAATGTGACAGAGTTTGA +TGGGCAGGATGCTTGTGGCTCCAACAGCTGGACTGTGGTGGATATTGACC +CGCCCCAGAGGTCCAACGACCCCAAGTCTCAGACCCCAAGCCACCCTGGG +TGGCTGATGCGGGGCCTCAAACCCTGGACCCAATACGCCATCTTTGTGAA +GACCTTGGTTACCTTCTC--TGATGAACGGC-GGACCTATGGAGCCAAAA +GTGATATCATCTATGTGCAAACAGATGCCACTAATCCTTCTGTCCCCCTG +GATCCCATATCAGTTTCTAATTCCTCATCTCAGATTATCTTAAAGTGGAA +GCCCCCCTCTGACCCCAATGGCAACATCACACACTACCTGGTGTACTGGG +AGAGGCAAGCAGAGGACAGCGAGCTGTTTGAGCTGGATTATTGTCTCAAA +GGGCTGAAGCT-CCCTTCACGGACCTGGTCCCCAC--CCTTTGAGTCTGA +TGAT-TCTCAGAAG--CACAATCAGAGTGAGTATGACGACTCGGCCAGTG +AGTGCTGCTCATGCCCTAAGACTGACTCTCAGATCCTGAAGGAGCTGGAG +GAGTCTTCATTCAGGAAGACCTTCGAGGATTACCTGCACAACGTGGTTTT +TGTCCCCAGGCCATCCCGAAAGCGAAGATCCCTTGAAGAGGTGGGGAATG +TGAC---AGCCACCACACTCACACTTCCAGATTTCCCCAACGTCTCCTCT +ACCATTGTGCCCACAAGTCAGGAG---GAGCACAGGCCATTTGAGAA--- +AGTGGTGAACAAGGAGTCACTTGTCATCTCTGGCCTGAGACACTTCACTG +GGTACCGCATTGAGCTGCAGGCATGCAATCAAGATTCCCCAGATGAGAGG +TGCAGTGTGGCTGCCTACGTCAGTGCCCGGACCATGCCTGAAGCTAAGGC +AGATGACATCGTTGGCCCTGTGACTCATGAAATCTTTGAGAACAATGTTG +TACACTTAATGTGGCAAGAGCCAAAGGAACCTAATGGTCTGATTGTGCTA +TATGAAGTGAGCTATCGCCGATATGGTGATGAGGAGCTGCACCTCTGTGT +CTCCCGGAAGCATTTTGCCCTGGAGCGGGGCTGCAGGCTGCGAGGGCTCT +CCCCAGGAAACTACAGTGTTCGAGTCCGGGCTACCTCTCTGGCAGGAAAT +GGCTCCTGGACAGAACCCACCTATTTTTATGTGACTGATTATTTAGATGT +CCCATCAAATATTGCCAAAATTATCATTGGACCCCTCATCTTTGTCTTCC +TCTTCAGTGTTGTGATTGGAAGTATT---TATCTATTTCTGAGAAAGAGG +CA----GCCGGATGGGCCAATGGGACCACTGTATGCATCTTCAAACCCTG +AGTACCTCAGTGCCAGTGATGTGTTTCCATCTTCTGTGTACGTGCCGGAC +GAGTGGGAGGTGCCTCGAGAGAAGATCACCCTTCTTCGAGAGCTGGGGCA +GGGATCCTTTGGTATGGTGTATGAAGGCAATGCCAAGGATATCATCAAGG +GTGAGGCAGAGACCCGTGTTGCGGTTAAGACTGTCAATGAGTCAGCCAGT +CTTCGAGAACGGATCGAGTTCCTCAATGAGGCATCAGTCATGAAGGGATT +CACCTGCCATCATGTGGTCCGCCTTCTTGGGGTGGTATCCAAAGGACAGC +CAACGCTGGTAGTGATGGAATTGATGGCTCATGGAGACCTGAAAAGTCAC +CTCCGTTCTCTGAGGCCAGATGCTGAG---AATAACCCAGGCCGCCCTCC +CCCTACCTTGCAAGAAATGATTCAGATGACAGCAGAAATTGCTGATGGCA +TGGCATACTTGAACGCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGA +AACTGCATGGTTGCCCATGATTTTACTGTCAAAATTGGAGACTTTGGAAT +GACAAGGGACATCTACGAGACAGATTACTATCGGAAAGGGGGCAAGGGAC +TGCTTCCTGTGAGGTGGATGTCACCTGAGTCCCTGAAGGATGGAGTCTTT +ACTGCTTCTTCTGATATGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCAC +TAGCCTGGCTGAGCAACCTTATCAAGGCCTGTCTAATGAACAGGTGTTGA +AGTTTGTCATGGATGGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAG +AGACTCACTGACCTGATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAG +GCCAACCTTCCTGGAAATCGTCAACCTGCTCAAGGATGACCTCCACCCCA +GCTTTCCAGAAGTTTCCTTCTTCTACAGCGAGGAGAACAAGGCTCCTGAG +AGTGAGGAGCTGGAGATGG------------AGTTTGAAGACATGGAGAA +TGTCCCGTTGGATCGTTC----------------CTCTCACTGTCAGAGA +GAA----GAGGCTGGGGGCCGGGAGGGAGGG-------TCCTCACTGAGC +ATCAAACGGACCTATGATGAACACATCCCCTATACCCACATGAATGGGGG +CAAGAAGAACGGACGTGTCCTTACCCTGCCAAGGTCAAACCCTTCCTAA +>ENSCAFT00000026349_canisfamiliaris +----ATGGCAGTGCCCAGTCTGTGCCCATGGGTCGCATGCCTGCTGGTGA +TC----CTCCTCTCCTTGGGATTTGGCCTGGACACACT--------AGAG +GTGTGC---CCCAGCCTGGACATCCGCTCAGAGGTGGCGGAGCTGCGCCG +GCTGGAGAACTGCAGCGTGGTGGAGGGCCATCTGCAGATCCTGCTCATGT +TCACGGCCACGGGCGAGGACTTCCGCGGCCTCAGCTTCCCGCGCCTCACT +CAGGTCACTGACTACCTGCTGCTCTTCCGCGTGTATGGCCTGGAGAGCCT +GCGGGACCTCTTCCCCAACCTCGCGGTCGTGCGTGGCGCCCGCCTCTTCC +TGGGTTATGCGCTGGTGGTCTACGAGATGCCGCACCTGCGGGACGTGGGG +CTGCCGGCGCTGGGGGCCGTGCTGCGTGGGGCCGTGCGGGTGGAGAAGAA +CCAGGAGCTCTGTCATCTCTCCACCATCGACTGGGGGCTGCTGCAGCCCT +CGCCCAGCGCCAACCACATCGTGGGCAACAA-GCTGCGTG--AGGAGTGT +GCCGACGTGTGCCCTGGTGTGCTGGGTGCCACCGGCCAGCCCTGCGCCAG +GACCACCTTCAGTGGGCACACCGACTACAGATGCTGGACCTCCAGCCACT +GCCAGAGAGTGTGTCCCTGCCCCCATGGG---CTGGCCTGCACAGCTGGG +GGTGAGTGCTGCCACACTGAATGCCTGGGGGGCTGCAGCCGGCCGGAAGA +CCCCCGCGCCTGCGTCGCCTGTCGCCACCTCTACTTCCAGGGTGCCTGCC +ACCGGGCCTGCCCTCCAGGCACCTACCAGCACGAGTCCTGGCGCTGTGTC +ACGGCAGAGCGCTGTGCCAGCCTGCGCTCTGTGCCCGGCCG--------- +----CACCTCCATC--TTTGGCATCCACGAGGGCAGCTGCCTGGCCCAGT +GCCCTCCGGGCTTCACCCGCAACGGCAGC---AGCATGTTCTGCCACAAG +TGTGAGGGGCTGTGCCCCAAAGAGTGCA---------AGGTGGGTACCAA +GACCATCGACTCCACGCAGGCGGCACAGGACCTGGCGGGCTGCACCCACG +TGGAGGGGAGCCTCATCATCAACCTCCGCCAGGGCTACAACCTAGAGCTG +GAGCTGCAACAGAGCCTGGGGCTGATAGAGACCATCACTGGCTTCCTCAA +GATCAAGCACTCCTTTGCCCTCGTGTCCCTGGGCTTTTTCAAGAACCTCA +AACTCATCCGAGGGGACGCCATGGTGGATGGGAACTACACCCTGTATGTG +CTGGACAACCAGAACCTACAGCAGCTGGGGGCCTGGGTGGCTGCGGGGCT +CACCATTCCCGTGGGCAAGATATACTTCGCTTTCAACCCTCGCCTCTGCT +TGGAGCACATCTACCGCCTGGAAGAGGTGACCGGCACGCGGGGACGGCAA +AACAAGGCTGAGATCAACCCCCGCACCAACGGAGACCGCGCCGCCTGCCA +AACTCGCACCCTGCGCTTCGTGTCCAACGTGACGCAAGCTGACAGCATCT +TGCTGCGCTGGGAGCGCTACGAGCCGCTGGAGGCTCGGGACCTGCTCAGC +TTCATCGTGTACTACAAGGAGTCCCCATTCCAGAATGCCACAGAGCACAC +AGGTCCAGATGCCTGTGGAACCCAGAGCTGGAACCTGCTGGATGTGGAGC +TGCCCTTAAG---CCGCACCCAAGAACCCGGGGTAA-------------- +----CTCTAGCACCCCTCAAGCCCTGGACACAATATGCAGTGTTTGTACG +GGCCATCACACTGACCACTGCTGAGGACAGCCCCCACCAAGGAGCCCAGA +GCCCCATCGTCTACCTCCGAACCCTGCCTGCGGCGCCCACTGTGCCCCAG +GACGTCATCTCCACGTCCAATTCCTCGTCCCACCTGCTCGTGCGCTGGAA +GCCACCGATTCAGCGCAACGGGAACATCACCTACTACCTGGTGCTGTGGC +AGCGTCTGGCGGAGGACGGCGACCTCTATCTCAACGACTACTGCCACCGC +GGCCTGCGGCTGCCCACCAGCAACAACGACCCGCG---CTTCGACCGCGA +GGA-----CGGTGAACTCGAAGCCGAGATGGAGCCGGGCTGCTGCCCTTG +CCAGCACCCACCGCCT--GGGCAGGTCCT--GCCGCCGCTGGAGGCGCAA +GAGGCCTCGTTCCAGAAGAAGTTCGAAAACTTCCTGCACAACGCCATCAC +CATCCCCAAGTCCCCCTGGAAGGTGACGTCCGTCA-ATAAGAGCCCTCAA +AGAC--------ATGCGGGGAGGCACCGCCGGGCGGCCGGGGC--GCTCC +GGCTTGGGGGCAACAGCTCG-------GATTTCGAGATCCAGGAGGACAA +AGTGCC---CCGGGAGCGAGCAGTGTTGAGTGGTCTGCGCCACTTTACGG +AATATCGTATCGACATCCACGCCTGCAACCACGCGGCTCACACCGTGGGC +TGCAGCGCGGCCACGTTCGTCTTCGCGCGCACCATGCCGCACAGAGAAGC +TGATGGCATCCCAGGGAAGGTGGCCTGGGAGGCAGCCAGCAAAAGCAGTG +TCCTCCTGCGCTGGCTGGAGCCACCTGACCCCAACGGACTCATCCTCAAG +TATGAAATCAAGTACCGCCGCTTGGGAGAGGAGGCCACAGTGCTATGTGT +GTCCCGCCTACGATATGCCAAATTTGGGGGTGTCCAGCTGGCCCTGCTGC +CCCCTGGAAACTACTCCGCCAGAGTTCGGGCAACCTCGCTGGCTGGCAAC +GGCTCCTGGACAGAAAGTATCGCTTTCTACGTCCCAGGCCCAGAGGAGGA +------AGACTCCGGGGGGCTGCACGTCCTTCTCACTGTCACCCCCGTGG +GGCTCATGCTGTTCATCATTCTTGCCGC-CCTCGGTTTCTTCTACGG--- +--------CAGGAAGAGAAACAGCAC-CCTCTATGCCTCAGTGAATCCGG +AGTACTTCAGCGCCTCTGAT---------------ATGTACATCCCTGAT +GAGTGGGAGGTGCCTCGGGAGCAGATCTCCATAATCCGAGAGCTGGGCCA +GGGCTCCTTTGGGATGGTATATGAAGGCCTGGCACAAGGACTAGAGGCTG +GAGAGGAGTCCACACCCGTGGCCCTGAAGACAGTGAATGAGTTGGCCAGC +CCACGAGAACGCATTGAGTTCCTCAAGGAAGCTTCTGTCATGAAGGCATT +CAAGTGTCACCATGTGGTACGTCTCCTGGGTGTTGTGTCTCAAGGCCAGC +CAACTCTGGTCATCATGGAGTTAATGACTCGTGGGGACCTCAAGAGCCAT +CTTCGATCTCTGCGGCCTGAGGCAGAG---AACAACCCTGGGCTCCCACG +GCCAGCACTGGGAGATATGATCCAGATGGCTGGTGAGATTGCAGATGGCA +TGGCTTACCTCGCTGCCAACAAGTTTGTGCATCGAGACCTGGCAGCCAGA +AACTGCATGGTGTCCCAGGACTTCACCGTCAAGATTGGGGACTTCGGGAT +GACTCGAGACGTGTACGAGACAGACTATTACCGCAAGGGCGGGAAAGGGC +TGCTGCCCGTGCGCTGGATGGCCCCCGAGTCCCTCAAAGATGGAATCTTC +ACCACACATTCGGATGTTTGGTCCTTCGGGGTGGTGCTCTGGGAGATCGT +GACCCTAGCTGAACAGCCCTACCAGGGTTTATCCAACGAGCAGGTGCTCA +AGTTTGTCATGGATGGTGGGGTCCTGGAGGAGCTGGAGAGCTGTCCCCTT +CAGCTGCAAGAACTGATGAGCCGCTGCTGGCAGCAGAACCCACGCCTGCG +GCCCACCTTCACCCACATCCTGGACAGCATTCGGGGGGAACTGCGGCCCT +CTTTCCGCCTCTTTTCCTTCTATTACAGCCCAGAGTGCCAGG----GGAG +CCAGGGGGCCCTGCT-----------------GCCTAATGCCAAACCCAA +CTCCCTACCAACCCCAGAAGGGGCT-------CCCTCAGACTGCATGCCC +CAAAATGGGGGTCCAGGGCACTGA-------------------------- +-------------------------------------------------- +------------------------------------------------- +>ENSMUST00000005671_homosapiens +ATGAAGTCTGGCTCCGGAGGAGGGTCCCCGA-CCTCGC---TGTGGGGGC +TCGTGTTTCTCTCCGCCGCGCTCTCTCTCTGGCCGACGAG---TGGAGAA +ATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGCAGCTGAAGCG +CCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGCTCATCT +CCAAGGCC------GAGGACTACCGAAGCTACCGCTTCCCCAAGCTCACC +GTCATCACTGAGTACTTGCTGCTCTTCCGAGTCGCTGGCCTCGAGAGCCT +GGGAGACCTCTTCCCCAACCTCACAGTCATCCGTGGCTGGAAACTCTTCT +ACAACTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGATATTGGG +CTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGAGAAGAA +CGCCGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCTTGGATG +CGGTGTCCAATAACTACATTGTGGGGAACAA-GCCCCCGA--AGGAATGT +GGGGACCTGTGTCCAGGGACATTGGAGGAGAA-GCCCA--TGTGTGAGAA +GACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAAATCGCT +GCCAGAAAATGTGCCCAAGTGTGTGCGGGAAGCGAGCCTGCACCGAGAAC +AACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACCGGACGA +CAACACAACCTGCGTGGCCTGCAGACACTACTACTACAAAGGCGTGTGTG +TGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGCTGTGTG +GATCGCGATTTCTGC----GCCAACATCCCCAACGCTGAGA------GCA +G--TGACTCGGATGGCTTCGTTATCCACGACGATGAGTGCATGCAGGAGT +GTCCCTCAGGCTTCATCCGCAACAGCACCCAGAGCATGTACTGTATCCCC +TGCGAAGGCCCCTGCCCCAAAGTCTGCGGCGATGAAGAGAAGAAAACGAA +AACCATCGATTCGGTGACTTCTGCTCAAATGCTCCAAGGATGCACCATCC +TGAAGGGCAATCTGCTTATTAACATCCGGAGAGGCAATAACATTGCCTCG +GAGTTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACCGGCTACGTGAA +GATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTGAAGAACCTTC +GTCTCATCTTAGGAGAGGAGCAGCTGGAAGGGAACTACTCCTTCTATGTC +CTAGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAACCACCGGAACCT +GACCGTCAGGTCCGGAAAGATGTACTTTGCTTTCAATCCCAAGCTGTGTG +TCTCCGAAATTTACCGCATGGAGGAAGTGACCGGAACCAAGGGACGCCAG +AGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGA +AAGTGATGTTCTCCGTTTCACCTCCACCACGACCTGGAAGAACCGAATCA +TCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGATCTCATCAGC +TTCACAGTTTACTACAAGGAGGCACCATTTAAAAACGTTACGGAATATGA +CGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTGGATGTAGACC +TGCCTCCGAA---CAAGGAGGGCGAGCCTGGCATTT-------------- +----TACTGCATGGGCTGAAGCCCTGGACCCAGTATGCTGTCTATGTCAA +GGCTGTGACCCTCACCATGGTGGAAAACGACCATATCCGTGGGGCCAAAA +GTGAAATCTTGTACATTCGCACCAATGCTTCAGTCCCTTCCATTCCCCTA +GATGTCCTCTCAGCATCAAACTCTTCCTCTCAGCTGATTGTGAAGTGGAA +TCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACATTGTGAGGTGGC +AGCGGCAGCCCCAGGATGGTTACCTGTACCGGCACAACTACTGCTCCAAA +GA--CAAAATA-CCCATCAGAAAGTACGCCGATGGTACCATCGACGTGGA +GGAGGTGACGGAAAATCCCAAGACAGAAGTGTGTGGTGGTGATAAAGGGC +CATGCTGCGCTTGCCCTAAAACTGAAGCTGAGAAGCAGGCTGAGAAGGAG +GAGGCTGAGTACCGTAAAGTCTTTGAGAATTTCCTTCACAATTCCATCTT +TGTGCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACA +CGACCATGTCCAGCCGAAGCAGGAACACCACGGTAGCTGACACCTACAAT +ATCACAGACCCGGAGGAGTTCGAGACAGAGTACCCTTTCTTTGAGAGCAG +AGTGGATAACAAGGAGAGGACTGTCATCTCCAACCTCCGGCCTTTCACTC +TGTACCGCATCGATATCCACAGCTGCAACCACGAGGCTGAGAAGCTGGGC +TGCAGCGCCTCCAACTTCGTCTTTGCGAGAACCATGCCAGCAGAAGGAGC +AGATGATATCCCTGGTCCGGTGACCTGGGAGCCAAGACCCGAAAACTCCA +TCTTTTTAAAGTGGCCAGAACCCGAGAACCCCAACGGATTGATCCTAATG +TATGAAATTAAATACGGGTCGCAAGTCGAGGATCAGCGGGAA---TGTGT +GTCCAGACAGGAGTACAGGAAGTACGGAGGGGCCAAACTCAACCGTCTAA +ACCCAGGGAACTATACAGCCCGGATTCAGGCTACCTCCCTCTCTGGGAAT +GGGTCATGGACAGATCCTGTGTTCTTCTATGTC-CCCGCCAAAACGACGT +ATGA--GAACTTCATGCATCTGATCATTGCTCTGCCGGTTGCCATCCTGC +TGATCGTTGGGGGGCTGGTTATCATGCTGTATGTCTTCCATAGAAAGAGA +AATAACAGCAGGTTGGGCAATGGAGT-GCTGTATGCTTCTGTGAACCCCG +AGTATTTCAGCGCAGCTGAT---------------GTGTACGTGCCTGAT +GAATGGGAGGTAGCTCGAGAGAAGATCACCATGAACCGGGAGCTCGGACA +AGGGTCCTTTGGGATGGTCTATGAAGGAGTGGCCAAGGGTGTGGTCAAGG +ATGAACCCGAAACCAGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGT +ATGCGTGAAAGAATCGAGTTTCTCAACGAGGCCTCGGTGATGAAGGAGTT +CAATTGTCACCATGTGGTCCGGTTGCTGGGTGTGGTATCCCAAGGCCAGC +CCACCCTGGTCATCATGGAACTAATGACACGCGGTGATCTCAAAAGTTAT +CTCCGGTCTCTGAGGCCAGAAGTGGAGCAGAATAATCTAGTCCTCATTCC +TCCGAGCTTAAGCAAGATGATCCAGATGGCTGGAGAGATTGCAGATGGCA +TGGCCTACCTCAATGCCAACAAGTTCGTCCACAGAGACCTTGCTGCTAGG +AACTGCATGGTAGCCGAAGATTTCACAGTCAAAATTGGAGATTTCGGTAT +GACACGAGACATCTACGAGACGGACTACTACCGGAAAGGCGGGAAGGGGT +TGCTGCCTGTGCGCTGGATGTCTCCCGAGTCCCTCAAGGATGGTGTCTTC +ACTACTCATTCTGATGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGC +CACGCTGGCTGAGCAGCCCTACCAGGGCTTGTCCAACGAGCAAGTTCTTC +GTTTCGTCATGGAGGGTGGCCTTCTGGACAAGCCGGACAACTGCCCTGAT +ATGCTGTTTGAACTTATGCGCATGTGCTGGCAGTATAACCCCAAGATGCG +GCCCTCCTTCCTGGAGATCATCGGCAGCATCAAGGATGAGATGGAGCCCA +GCTTCCAGGAGGTCTCCTTCTACTACAGCGAGGAGAACAAGCCTCCCGAG +CCAGAGGAGCTGGAGATGG------------AGCCTGAGAACATGGAGAG +CGTCCCACTGGACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAA +GACACTCAGGACACAAGGCTGAGAATGGCCCGGGCCCTGGCGTGCTCGTT +CTCCGCGCCAGTTTTGATGAGAGACAGCCTTACGCTCACATGAACGGGGG +ACGCGCCAACGAGAGGGCCTTGCCTCTGCCCCAGTCCTCGACCTGCTGA +>ENSRNOT00000019267_rattusnorvegicus +ATGAAGTCTGGCTCCGGAGGAGGGTCCCCGA-CCTCGC---TGTGGGGGC +TCGTGTTTCTCTCCGCCGCGCTCTCGCTCTGGCCGACGAG---TGGAGAA +ATTTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGCAGCTGAAGCG +CCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGCTCATCT +CCAAGGCC------GAGGACTACCGAAGCTACCGCTTCCCCAAGCTCACG +GTCATCACCGAGTACTTGCTGCTGTTTCGAGTGGCCGGCCTCGAGAGCCT +GGGAGACCTCTTCCCGAACCTCACAGTCATCCGTGGCTGGAAACTCTTCT +ACAATTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGATATTGGG +CTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGAGAAAAA +CGCTGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCTTGGATG +CGGTGTCCAATAACTACATTGTGGGGAACAA-GCCCCCAA--AGGAATGT +GGGGACCTGTGTCCAGGGACCTTGGAGGAGAA-GCCCA--TGTGTGAGAA +GACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAAATCGCT +GCCAGAAAATGTGCCCAAGTGTGTGTGGGAAGCGAGCCTGCACCGAGAAC +AATGAGTGCTGCCACCCGGAGTGCCTAGGCAGCTGCCACACACCGGACGA +CAACACAACCTGCGTGGCCTGCCGACACTACTACTACAAAGGCGTGTGCG +TGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGCTGTGTG +GACCGGGATTTCTGC----GCCAACATCCCCAACGCCGAGA------GCA +G--TGACTCAGATGGCTTCGTCATCCACGATGGCGAGTGCATGCAGGAGT +GTCCATCAGGCTTCATCCGCAACAGCACCCAGAGCATGTACTGTATCCCC +TGTGAAGGCCCCTGCCCCAAGGTCTGCGGCGATGAAGAAAAGAAAACGAA +AACCATCGATTCTGTGACGTCTGCCCAGATGCTCCAAGGGTGCACCATTT +TGAAGGGCAATCTGCTTATTAACATCCGGCGAGGCAATAACATTGCCTCG +GAATTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACTGGCTACGTGAA +GATCCGCCATTCCCATGCCTTGGTCTCCTTGTCCTTCCTGAAGAACCTTC +GTCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAACTACTCCTTCTATGTC +CTGGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAACCACCGGAACCT +GACCGTCAGGTCAGGGAAAATGTACTTCGCTTTCAATCCCAAGCTGTGTG +TCTCTGAAATTTACCGGATGGAGGAGGTGACAGGAACAAAGGGACGGCAG +AGCAAAGGAGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGA +AAGTGATGTTCTCCGTTTCACCTCCACCACCACCTGGAAGAACCGCATCA +TCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGATCTCATCAGT +TTCACAGTCTACTACAAGGAGGCACCCTTTAAAAACGTCACGGAATACGA +CGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTGGACGTGGACC +TGCCTCCGAA---CAAGGAGGGGGAGCCTGGCATTT-------------- +----TGCTGCATGGGCTGAAGCCCTGGACCCAGTATGCAGTCTATGTCAA +GGCTGTGACCCTCACCATGGTGGAAAACGACCACATCCGTGGGGCCAAAA +GTGAAATCTTGTACATTCGCACCAACGCTTCAGTTCCTTCCATTCCTCTA +GATGTCCTCTCGGCATCAAACTCCTCCTCTCAGCTGATCGTGAAGTGGAA +CCCCCCAACTCTGCCCAATGGTAACTTGAGTTACTACATTGTGAGGTGGC +AGCGGCAGCCGCAGGATGGCTATCTGTTCCGGCACAACTACTGCTCCAAA +GA--CAAAATA-CCCATCAGAAAGTACGCCGATGGTACCATCGATGTGGA +GGAGGTGACAGAAAATCCCAAGACAGAAGTGTGCGGTGGTGATAAAGGGC +CGTGCTGTGCCTGTCCTAAAACCGAAGCTGAGAAGCAGGCTGAGAAGGAG +GAGGCTGAGTACCGTAAAGTCTTTGAGAATTTCCTTCACAACTCCATCTT +TGTGCCCAGACCTGAGAGGAGGCGGAGAGATGTCCTGCAGGTGGCTAACA +CCACCATGTCCAGCCGAAGCAGGAACACCACGGTAGCTGACACCTACAAT +ATCACAGACCCGGAAGAGTTCGAGACAGAATACCCTTTCTTTGAGAGCAG +AGTGGATAACAAGGAGAGGACTGTCATTTCCAACCTCCGGCCTTTCACTC +TGTACCGTATCGATATCCACAGCTGCAACCACGAGGCTGAGAAGCTGGGC +TGCAGCGCCTCCAACTTTGTCTTTGCAAGAACCATGCCAGCAGAAGGAGC +AGATGACATTCCTGGCCCAGTGACCTGGGAGCCAAGACCTGAAAACTCCA +TCTTTTTAAAGTGGCCAGAACCCGAGAACCCCAACGGATTGATTCTAATG +TATGAAATAAAATACGGATCGCAAGTCGAGGATCAGCGGGAA---TGTGT +GTCCAGACAGGAGTACAGGAAGTATGGAGGGGCCAAACTTAACCGTCTAA +ACCCAGGGAACTATACGGCCCGGATTCAGGCTACCTCCCTCTCTGGGAAT +GGGTCGTGGACAGATCCTGTGTTCTTCTATGTC-CCAGCCAAAACAACGT +ATGA--GAATTTCATGCATCTGATCATTGCTCTGCCGGTTGCCATCCTGC +TGATTGTGGGGGGCCTGGTAATCATGCTGTATGTCTTCCATAGAAAGAGG +-------GTGTCTGGGCCAGCAGAAG-GCAGTA-GTTGGAAAGGGCCATT +TCCATCCTGTCTGTTCCTA----------------GTGTACGTGCCTGAT +GAATGGGAGGTAGCTCGGGAGAAGATCACCATGAACCGGGAGCTCGGACA +AGGGTCCTTCGGGATGGTCTATGAAGGAGTGGCCAAGGGCGTGGTCAAGG +ACGAGCCTGAAACCAGAGTGGCCATCAAGACAGTGAATGAGGCTGCAAGT +ATGCGTGAGAGAATTGAGTTTCTCAACGAGGCCTCAGTGATGAAGGAGTT +CAACTGTCACCATGTGGTCCGGTTGCTGGGTGTAGTATCCCAAGGCCAGC +CCACCCTGGTCATCATGGAACTAATGACACGTGGCGATCTCAAAAGTTAT +CTCCGGTCTCTAAGGCCAGAGGTGGAG---AATAATCTAGTCCTGATTCC +TCCGAGCTTAAGCAAGATGATCCAGATGGCTGGAGAGATTGCAGATGGCA +TGGCCTACCTCAATGCCAACAAGTTCGTCCACAGAGACCTGGCTGCTCGG +AACTGCATGGTAGCTGAAGATTTCACAGTCAAAATTGGAGATTTTGGTAT +GACACGAGACATCTACGAGACGGACTACTACCGGAAAGGCGGGAAGGGCT +TGCTGCCTGTGCGCTGGATGTCTCCCGAGTCCCTCAAGGATGGCGTCTTC +ACCACTCATTCCGATGTCTGGTCCTTTGGGGTCGTCCTCTGGGAGATCGC +CACTCTGGCTGAGCAGCCGTACCAGGGCCTGTCCAACGAGCAAGTTCTTC +GTTTCGTCATGGAGGGCGGCCTTCTGGACAAGCCGGATAACTGCCCCGAT +ATGCTGTTTGAACTTATGCGCATGTGCTGGCAGTACAACCCCAAGATGCG +GCCCTCCTTCCTGGAGATCATCGGAAGCATCAAGGATGAGATGGAGCCCA +GTTTCCAGGAGGTCTCCTTCTACTACAGCGAGGAGAACAAGCCTCCAGAG +CCGGAGGAGCTGGAGATGGAGCTGGAGCTGGAGCCCGAGAACATGGAGAG +CGTCCCGCTGGACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAA +GACACTCAGGACACAAGGCTGAGAACGGCCC------TGGCGTGCTGGTT +CTCCGTGCCAGTTTTGATGAGAGACAGCCTTACGCTCACATGAATGGGGG +ACGCGCCAACGAGAGGGCCTTGCCTCTGCCCCAGTCCTCAACCTGC--- +>ENSPTRT00000013802_pantroglodytes +ATGAAGTCTGGCTCCGGAGGAGGGTCCCCGA-CCTCGC---TGTGGGGGC +TCCTGTTTCTCTCCGCCGCGCTCTCGCTCTGGCCGACGAG---TGGAGAA +ATCTGCGGGCCAGGCATCGACATCCGCAACGACTATCAGCAGCTGAAGCG +CCTGGAGAACTGCACGGTGATCGAGGGCTACCTCCACATCCTGCTCATCT +CCAAGGCC------GAGGACTACCGCAGCTACCGCTTCCCCAAGCTCACG +GTCATTACCGAGTACTTGCTGCTGTTCCGAGTGGCTGGCCTCGAGAGCCT +CGGAGACCTCTTCCCCAACCTCACGGTCATCCGCGGCTGGAAACTCTTCT +ACAACTACGCCCTGGTCATCTTCGAGATGACCAATCTCAAGGATATTGGG +CTTTACAACCTGAGGAACATTACTCGGGGGGCCATCAGGATTGAGAAAAA +TGCTGACCTCTGTTACCTCTCCACTGTGGACTGGTCCCTGATCCTGGATG +CGGTGTCCAATAACTACATTGTGGGGAATAA-GCCCCCAA--AGGAATGT +GGGGACCTGTGTCCAGGGACCATGGAGGAGAA-GCCGA--TGTGTGAGAA +GACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAAACCGCT +GCCAGAAAATGTGCCCGAGCACGTGTGGGAAGCGGGCGTGCACCGAGAAC +AACGAGTGCTGCCACCCCGAGTGCCTGGGCAGCTGCAGCGCGCCTGACAA +CGACACGGCCTGTGTAGCTTGCCGCCACTACTACTATGCCGGTGTCTGTG +TGCCTGCCTGCCCGCCCAACACCTACAGGTTTGAGGGCTGGCGCTGTGTG +GACCGTGACTTCTGC----GCCAACATCCTCAGCGCCGAGA------GCA +G--CGACTCCGAGGGGTTTGTGATCCACGACGGCGAGTGCATGCAGGAGT +GCCCCTCGGGCTTCATCCGCAACGGCAGCCAGAGCATGTACTGCATCCCT +TGTGAAGGTCCTTGCCCGAAGGTCTGTG---AGGAAGAAAAGAAAACAAA +GACCATTGATTCTGTTACTTCTGCTCAGATGCTCCAAGGATGCACCATCT +TCAAGGGCAATTTGCTCATTAACATCCGACGGGGGAATAACATTGCTTCA +GAGCTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACGGGCTACGTGAA +GATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTAAAAAACCTTC +GCCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAATTACTCCTTCTACGTC +CTCGACAACCAGAACTTGCAGCAACTATGGGACTGGGACCACCGCAACCT +GACCATCAAAGCAGGGAAAATGTACTTTGCTTTCAATCCCAAATTATGTG +TTTCCGAAATTTACCGCATGGAGGAAGTGACGGGGACTAAAGGGCGCCAA +AGCAAAGGGGACATAAACACCAGGAACAACGGGGAGAGAGCCTCCTGTGA +AAGTGACGTCCTGCATTTCACCTCCACCACCACGTCGAAGAATCGCATCA +TCATAACCTGGCACCGGTACCGGCCCCCTGACTACAGGGATCTCATCAGC +TTCACCGTTTACTACAAGGAAGCACCCTTTAAGAATGTCACGGAGTATGA +TGGGCAGGACGCCTGCGGCTCCAACAGCTGGAACATGGTGGACGTGGACC +TCCCGCCCAA---CAAGGACGTGGAGCCCGGCATCT-------------- +----TACTACATGGGCTGAAGCCCTGGACTCAGTACGCCGTTTACGTCAA +GGCTGTGACCCTCACCATGGTGGAGAATGACCATATCCGTGGGGCCAAGA +GTGAGATCTTGTACATTCGCACCAATGCTTCAGTTCCTTCCATTCCCTTG +GACGTTCTTTCAGCATCGAACTCCTCTTCTCAGTTAATCGTGAAGTGGAA +CCCTCCCTCTCTGCCCAACGGCAACCTGAGTTACTACATTGTGCGCTGGC +AGCGGCAGCCTCAGGACGGCTACCTTTACCGGCACAATTACTGCTCCAAA +GA--CAAAATC-CCCATCAGGAAGTATGCCGACGGCACCATCGACATTGA +GGAGGTCACAGAGAACCCCAAGACTGAGGTGTGTGGTGGGGAGAAAGGGC +CTTGCTGCGCCTGCCCCAAAACTGAAGCCGAGAAGCAGGCCGAGAAGGAG +GAGGCTGAATACCGCAAAGTCTTTGAGAATTTCCTGCACAACTCCATCTT +CGTGCCCAGACCTGAAAGGAAGCGGAGAGATGTCATGCAAGTGGCCAACA +CCACCATGTCCAGCCGAAGCAGGAACACCACGGCCGCAGACACCTACAAC +ATCACCGACCCGGAAGAGCTGGAGACAGAGTACCCTTTCTTTGAGAGCAG +AGTGGATAACAAGGAGAGAACTGTGATTTCTAACCTTCGGCCTTTCACAT +TGTACCGCATCGATATCCACAGCTGCAACCACGAGGCTGAGAAGCTGGGC +TGCAGCGCCTCCAACTTTGTCTTTGCAAGGACTATGCCCGCAGAAGGAGC +AGATGACATTCCTGGGCCAGTGACCTGGGAGCCAAGGCCTGAAAACTCCA +TCTTTTTAAAGTGGCCGGAACCTGAGAATCCCAATGGATTGATTCTAATG +TATGAAATAAAATACGGATCACAAGTTGAGGATCAGCGAGAA---TGTGT +GTCCAGACAGGAATACAGGAAGTATGGAGGGGCCAAGCTAAACCGGCTAA +ACCCGGGGAACTACACAGCCCGGATTCAGGCCACATCTCTCTCTGGGAAT +GGGTCGTGGACAGATCCTGTGTTCTTCTATGTC-CAGGCCAAAACAGGAT +ATGA--AAACTTCATCCATCTGATCATCGCTCTGCCCGTCGCTGTCCTGT +TGATCGTGGGAGGGTTGGTGATTATGCTGTACGTCTTCCATAGAAAGAGA +AATAACAGCAGGCTGGGGAATGGAGT-GCTGTATGCCTCTGTGAACCCGG +AGTACTTCAGCGCTGCTGAT---------------GTGTACGTTCCCGAT +GAGTGGGAGGTGGCTCGGGAGAAGATCACCATGAGCCGGGAACTTGGGCA +GGGGTCCTTTGGGATGGTCTATGAAGGAGTTGCCAAGGGTGTGGTGAAAG +ATGAACCTGAAACCAGAGTGGCCATTAAAACAGTGAACGAGGCCGCAAGC +ATGCGTGAAAGGATTGAGTTTCTCAACGAAGCTTCTGTGATGAAGGAGTT +CAATTGTCACCATGTGGTGCGATTGCTGGGTGTGGTGTCCCAAGGCCAGC +CAACACTGGTCATCATGGAACTGATGACACGGGGCGATCTCAAAAGTTAT +CTCCGGTCTCTGAGGCCAGAAATGGAG---AATAATCCAGTCCTAGCACC +TCCAAGCCTGAGCAAGATGATTCAGATGGCCGGAGAGATTGCAGACGGCA +TGGCATACCTCAACGCCAATAAGTTCGTCCACAGAGACCTTGCTGCCCGG +AATTGCATGGTAGCCGAAGATTTCACAGTCAAAATCGGAGATTTTGGTAT +GACGCGAGATATCTATGAGACAGACTATTACCGGAAAGGAGGGAAAGGGC +TGCTGCCCGTGCGCTGGATGTCTCCCGAGTCCCTCAAGGATGGAGTCTTC +ACCACTTACTCGGACGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGC +CACACTGGCCGAGCAGCCCTACCAGGGCTTGTCCAACGAGCAAGTCCTTC +GCTTCGTCATGGAGGGCGGCCTTCTGGACAAGCCAGACAACTGTCCCGAC +ATGCTGTTTGAACTGATGCGCATGTGCTGGCAGTATAACCCCAAGATGAG +GCCTTCCTTCCTGGAGATCATCAGCAGCATCAAAGAGGAGATGGAGCCTG +GCTTCCGGGAGGTCTCCTTCTACTACAGCGAGGAGAACAAGCTGCCCGAG +CCGGAGGAGCTGGACCTGG------------AGCCAGAGAACATGGAGAG +CGTCCCCCTGGACCCCTCGGCCTCC---------CTGCCACTGCCCGACA +GACACTCAGGACACAAGGCCGAGAACGGCCCCGGCCCTGGGGTGCTGGTC +CTCCGCGCCAGCTTCGACGAGAGACAGCCGTACGCACACATGAACGGGGG +CCGCAAGAACGAGCGGGCCTTGCCGCTGCCCCAGTCTTCGACCTGCTGA