# HG changeset patch # User earlhaminst # Date 1740394835 0 # Node ID e3507be607eb330a07313d179f88402e091a2994 # Parent ae69d14b6fbf71443475e4254e24878de9c891a7 planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/main/tools/t_coffee commit 6e40bbe92367310e9d3ec69571d08eb49af7c0a6-dirty diff -r ae69d14b6fbf -r e3507be607eb t_coffee.xml --- a/t_coffee.xml Thu Jan 14 12:14:52 2021 +0000 +++ b/t_coffee.xml Mon Feb 24 11:00:35 2025 +0000 @@ -87,7 +87,7 @@ - + @@ -156,15 +156,39 @@ - + + + + + - + + + + + - - - + + + + + + + + + + + + + + + - + + + + + @@ -183,7 +207,7 @@ This wrapper offers selected advanced T-Coffee options like the selection of the alignment methods to use: ''Pairwise Structual Method'', ''Multiple Sequence Alignment Methods'' or ''Pairwise Sequence Alignment Methods''. -The T-Coffee documentation can be found at http://www.tcoffee.org/Projects/tcoffee/ . +The T-Coffee documentation can be found at https://tcoffee.org/Projects/tcoffee/index.html . **Example** diff -r ae69d14b6fbf -r e3507be607eb test-data/output3.clustal --- a/test-data/output3.clustal Thu Jan 14 12:14:52 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,599 +0,0 @@ -CLUSTAL W (1.83) multiple sequence alignment - -ENSMUST00000091291_musmusculus ATGGG-CTTCGGGAGAGGATGTGAGACGACGG-----CTGTGCCATTGCT -ENSCAFT00000026349_canisfamiliaris ATGGCAGT---GCCCAGT--CTGTGCCCATGG-GTCGC-ATGC--CTGCT -ENSMUST00000005671_homosapiens ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT -ENSRNOT00000019267_rattusnorvegicus ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT -ENSPTRT00000013802_pantroglodytes ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT - *** * * * * * * * * ** *** - -ENSMUST00000091291_musmusculus GGTGGCCGTGGCCGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTG -ENSCAFT00000026349_canisfamiliaris GGTGATCCTCCTCTCCTTGGGATTTGGCCTGGAC------------ACAC -ENSMUST00000005671_homosapiens CGTGTTTCTCTCCGCCGCGCTC-TCTCTCTGGCCGA---C-----GAGTG -ENSRNOT00000019267_rattusnorvegicus CGTGTTTCTCTCCGCCGCGCTC-TCGCTCTGGCCGA---C-----GAGTG -ENSPTRT00000013802_pantroglodytes CCTGTTTCTCTCCGCCGCGCTC-TCGCTCTGGCCGA---C-----GAGTG - ** * * * * * * * - -ENSMUST00000091291_musmusculus GAGAGG--TGTG-CCCTGGTATGGACATCCGGAACAACC-TGACCAGGCT -ENSCAFT00000026349_canisfamiliaris TAGAGG--TGTG-CCCCAGCCTGGACATCCGCTCAGAGGTGGCGG-AGCT -ENSMUST00000005671_homosapiens GAGAAATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGC-AGCT -ENSRNOT00000019267_rattusnorvegicus GAGAAATTTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGC-AGCT -ENSPTRT00000013802_pantroglodytes GAGAAATCTGCGGGCCAGGCATCGACATCCGCAACGACTATCAGC-AGCT - *** ** * ** * * ******** * *** - -ENSMUST00000091291_musmusculus ACATGAGCTGGAGAACTGCTCAGTCATTGAGGGCCATCTGCAGATCCTCC -ENSCAFT00000026349_canisfamiliaris GCGCCGGCTGGAGAACTGCAGCGTGGTGGAGGGCCATCTGCAGATCCTGC -ENSMUST00000005671_homosapiens GAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGC -ENSRNOT00000019267_rattusnorvegicus GAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGC -ENSPTRT00000013802_pantroglodytes GAAGCGCCTGGAGAACTGCACGGTGATCGAGGGCTACCTCCACATCCTGC - ***** ****** ** * ****** ** ** ***** * - -ENSMUST00000091291_musmusculus TGATGTTCAAGACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAA -ENSCAFT00000026349_canisfamiliaris TCATGTTCACGGCCACGGGCGAGGACTTCCGCGGCCTCAGCTTCCCGCGC -ENSMUST00000005671_homosapiens TCATCTCCAAGG------CCGAGGACTACCGAAGCTACCGCTTCCCCAAG -ENSRNOT00000019267_rattusnorvegicus TCATCTCCAAGG------CCGAGGACTACCGAAGCTACCGCTTCCCCAAG -ENSPTRT00000013802_pantroglodytes TCATCTCCAAGG------CCGAGGACTACCGCAGCTACCGCTTCCCCAAG - * ** * ** * *** ** * *** * * * ***** - -ENSMUST00000091291_musmusculus CTCATCATGATCACAGATTACCTGCTTCTCTTCCGTGTCTATGGTCTGGA -ENSCAFT00000026349_canisfamiliaris CTCACTCAGGTCACTGACTACCTGCTGCTCTTCCGCGTGTATGGCCTGGA -ENSMUST00000005671_homosapiens CTCACCGTCATCACTGAGTACTTGCTGCTCTTCCGAGTCGCTGGCCTCGA -ENSRNOT00000019267_rattusnorvegicus CTCACGGTCATCACCGAGTACTTGCTGCTGTTTCGAGTGGCCGGCCTCGA -ENSPTRT00000013802_pantroglodytes CTCACGGTCATTACCGAGTACTTGCTGCTGTTCCGAGTGGCTGGCCTCGA - **** * ** ** *** **** ** ** ** ** ** ** ** - -ENSMUST00000091291_musmusculus AAGTCTGAAAGACCTCTTCCCAAATCTCACAGTCATCCGAGGCTCCCGTC -ENSCAFT00000026349_canisfamiliaris GAGCCTGCGGGACCTCTTCCCCAACCTCGCGGTCGTGCGTGGCGCCCGCC -ENSMUST00000005671_homosapiens GAGCCTGGGAGACCTCTTCCCCAACCTCACAGTCATCCGTGGCTGGAAAC -ENSRNOT00000019267_rattusnorvegicus GAGCCTGGGAGACCTCTTCCCGAACCTCACAGTCATCCGTGGCTGGAAAC -ENSPTRT00000013802_pantroglodytes GAGCCTCGGAGACCTCTTCCCCAACCTCACGGTCATCCGCGGCTGGAAAC - ** ** *********** ** *** * *** * ** *** * - -ENSMUST00000091291_musmusculus TCTTCTTCAACTATGCCCTGGTTATCTTCGAGATGGTCCACCTGAAGGAG -ENSCAFT00000026349_canisfamiliaris TCTTCCTGGGTTATGCGCTGGTGGTCTACGAGATGCCGCACCTGCGGGAC -ENSMUST00000005671_homosapiens TCTTCTACAACTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGAT -ENSRNOT00000019267_rattusnorvegicus TCTTCTACAATTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGAT -ENSPTRT00000013802_pantroglodytes TCTTCTACAACTACGCCCTGGTCATCTTCGAGATGACCAATCTCAAGGAT - ***** ** ** ***** *** ******* * ** *** - -ENSMUST00000091291_musmusculus CTGGGGCTTTATAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGA -ENSCAFT00000026349_canisfamiliaris GTGGGGCTGCCGGCGCTGGGGGCCGTGCTGCGTGGGGCCGTGCGGGTGGA -ENSMUST00000005671_homosapiens ATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA -ENSRNOT00000019267_rattusnorvegicus ATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA -ENSPTRT00000013802_pantroglodytes ATTGGGCTTTACAACCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA - * ***** ** * * * ** ** * * * * ** - -ENSMUST00000091291_musmusculus GAAGAATAATGAGCTCTGCTACCTGGCCACTATCGACTGGTCCCGTATCC -ENSCAFT00000026349_canisfamiliaris GAAGAACCAGGAGCTCTGTCATCTCTCCACCATCGACTGGGGGCTGCTGC -ENSMUST00000005671_homosapiens GAAGAACGCCGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCT -ENSRNOT00000019267_rattusnorvegicus GAAAAACGCTGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCT -ENSPTRT00000013802_pantroglodytes GAAAAATGCTGACCTCTGTTACCTCTCCACTGTGGACTGGTCCCTGATCC - *** ** ** ***** * ** **** * ****** * * - -ENSMUST00000091291_musmusculus TGGATTCTGTGGAGGACAACTACATTGTACTGAACAAAGATGACAACGAG -ENSCAFT00000026349_canisfamiliaris AGCCCTCGCCCAGCGCCAACCACATCGTGGGCAACAA-GCTGCGT--GAG -ENSMUST00000005671_homosapiens TGGATGCGGTGTCCAATAACTACATTGTGGGGAACAA-GCCCCCG--AAG -ENSRNOT00000019267_rattusnorvegicus TGGATGCGGTGTCCAATAACTACATTGTGGGGAACAA-GCCCCCA--AAG -ENSPTRT00000013802_pantroglodytes TGGATGCGGTGTCCAATAACTACATTGTGGGGAATAA-GCCCCCA--AAG - * * *** **** ** ** ** * ** - -ENSMUST00000091291_musmusculus GAATGTGGGGATGTCTGTCCAGGCACCGCCAAGGGCA-AGACCAA--CTG -ENSCAFT00000026349_canisfamiliaris GAGTGTGCCGACGTGTGCCCTGGTGTGCTGGGTGCCACCGGCCAGCCCTG -ENSMUST00000005671_homosapiens GAATGTGGGGACCTGTGTCCAGGGACATTGGAGGAGA-AGCCCAT--GTG -ENSRNOT00000019267_rattusnorvegicus GAATGTGGGGACCTGTGTCCAGGGACCTTGGAGGAGA-AGCCCAT--GTG -ENSPTRT00000013802_pantroglodytes GAATGTGGGGACCTGTGTCCAGGGACCATGGAGGAGA-AGCCGAT--GTG - ** **** ** * ** ** ** * * * * * ** - -ENSMUST00000091291_musmusculus TCCTGCCACTGTCATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACA -ENSCAFT00000026349_canisfamiliaris CGCCAGGACCACCTTCAGTGGGCACACCGACTACAGATGCTGGACCTCCA -ENSMUST00000005671_homosapiens TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA -ENSRNOT00000019267_rattusnorvegicus TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA -ENSPTRT00000013802_pantroglodytes TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA - ** * *** * * * ******** * - -ENSMUST00000091291_musmusculus GTCATTGTCAGAAAGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACA -ENSCAFT00000026349_canisfamiliaris GCCACTGCCAGAGAGTGTGTCCCTGCCCCCATGGG---CTGGCCTGCACA -ENSMUST00000005671_homosapiens ATCGCTGCCAGAAAATGTGCCCAAGTGTGTGCGGGAAGCGAGCCTGCACC -ENSRNOT00000019267_rattusnorvegicus ATCGCTGCCAGAAAATGTGCCCAAGTGTGTGTGGGAAGCGAGCCTGCACC -ENSPTRT00000013802_pantroglodytes ACCGCTGCCAGAAAATGTGCCCGAGCACGTGTGGGAAGCGGGCGTGCACC - * ** **** * * ** ** * * * ***** - -ENSMUST00000091291_musmusculus GCTGAAGGCCTGTGCTGCCACAAAGAGTGCCTGGGCAACTGTTCGGAACC -ENSCAFT00000026349_canisfamiliaris GCTGGGGGTGAGTGCTGCCACACTGAATGCCTGGGGGGCTGCAGCCGGCC -ENSMUST00000005671_homosapiens GAGAACAACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACC -ENSRNOT00000019267_rattusnorvegicus GAGAACAATGAGTGCTGCCACCCGGAGTGCCTAGGCAGCTGCCACACACC -ENSPTRT00000013802_pantroglodytes GAGAACAACGAGTGCTGCCACCCCGAGTGCCTGGGCAGCTGCAGCGCGCC - * ********** ** ***** ** *** ** - -ENSMUST00000091291_musmusculus TGATGACCCCACCAAGTGTGTGGCCTGTCGCAACTTCTATCTGGATGGTC -ENSCAFT00000026349_canisfamiliaris GGAAGACCCCCGCGCCTGCGTCGCCTGTCGCCACCTCTACTTCCAGGGTG -ENSMUST00000005671_homosapiens GGACGACAACACAACCTGCGTGGCCTGCAGACACTACTACTACAAAGGCG -ENSRNOT00000019267_rattusnorvegicus GGACGACAACACAACCTGCGTGGCCTGCCGACACTACTACTACAAAGGCG -ENSPTRT00000013802_pantroglodytes TGACAACGACACGGCCTGTGTAGCTTGCCGCCACTACTACTATGCCGGTG - ** ** * ** ** ** ** * ** *** ** - -ENSMUST00000091291_musmusculus AGTGTGTGGAGACCTGCCCGCCACCCTACTATCACTTCCAGGACTGGCGC -ENSCAFT00000026349_canisfamiliaris CCTGCCACCGGGCCTGCCCTCCAGGCACCTACCAGCACGAGTCCTGGCGC -ENSMUST00000005671_homosapiens TGTGTGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGC -ENSRNOT00000019267_rattusnorvegicus TGTGCGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGC -ENSPTRT00000013802_pantroglodytes TCTGTGTGCCTGCCTGCCCGCCCAACACCTACAGGTTTGAGGGCTGGCGC - ** ******* ** * *** ** ******* - -ENSMUST00000091291_musmusculus TGTGTGAACTTCAGCTTCTG--CCAAGACCTTCA-CTTCAAATGCAGGAA -ENSCAFT00000026349_canisfamiliaris TGTGTCACGGCAGAGCGCTGTGCCAGCCTGCG---CTCTGTGCCCGGCCG -ENSMUST00000005671_homosapiens TGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGA -ENSRNOT00000019267_rattusnorvegicus TGTGTGGACCGGGATTTCTGCGCCAACATCCCCAACGCCGAGAGCAGTGA -ENSPTRT00000013802_pantroglodytes TGTGTGGACCGTGACTTCTGCGCCAACATCCTCAGCGCCGAGAGCAGCGA - ***** *** *** * * * - -ENSMUST00000091291_musmusculus CTCTCGGAAGCCTGGCTGCCACCAATACGTCATTCACAACAATAAGTGCA -ENSCAFT00000026349_canisfamiliaris CAC---------------CTCCATCTTTGGCATCCACGAGGGCAGCTGCC -ENSMUST00000005671_homosapiens CTC---------------GGATGGCTTCGTTATCCACGACGATGAGTGCA -ENSRNOT00000019267_rattusnorvegicus CTC---------------AGATGGCTTCGTCATCCACGATGGCGAGTGCA -ENSPTRT00000013802_pantroglodytes CTC---------------CGAGGGGTTTGTGATCCACGACGGCGAGTGCA - * * * * ** *** * *** - -ENSMUST00000091291_musmusculus TCCCCGAGTGCCCGTCTGGCTATACCATGAATTCCAGC---AACTTGATG -ENSCAFT00000026349_canisfamiliaris TGGCCCAGTGCCCTCCGGGCTTCACCCGCAACGGCAGC---AGCATGTTC -ENSMUST00000005671_homosapiens TGCAGGAGTGTCCCTCAGGCTTCATCCGCAACAGCACCCAGAGCATGTAC -ENSRNOT00000019267_rattusnorvegicus TGCAGGAGTGTCCATCAGGCTTCATCCGCAACAGCACCCAGAGCATGTAC -ENSPTRT00000013802_pantroglodytes TGCAGGAGTGCCCCTCGGGCTTCATCCGCAACGGCAGCCAGAGCATGTAC - * **** ** * **** * * ** ** * * * ** - -ENSMUST00000091291_musmusculus TGCACCCCATGTCTGGGACCCTGCCCTAAGGTCTGCCAA-ATCCTC-GAA -ENSCAFT00000026349_canisfamiliaris TGCCACAAGTGTGAGGGGCTGTGCCCCAAAGAGTGCA---AGGT------ -ENSMUST00000005671_homosapiens TGTATCCCCTGCGAAGGCCCCTGCCCCAAAGTCTGCGGCGATGAAGAGAA -ENSRNOT00000019267_rattusnorvegicus TGTATCCCCTGTGAAGGCCCCTGCCCCAAGGTCTGCGGCGATGAAGAAAA -ENSPTRT00000013802_pantroglodytes TGCATCCCTTGTGAAGGTCCTTGCCCGAAGGTCTGTG---AGGAAGAAAA - ** * ** ** * ***** ** * ** * - -ENSMUST00000091291_musmusculus GGTG-AGAAGACCATTGATTCTGTGACATCTGCCCAGGAGCTCCGAGGCT -ENSCAFT00000026349_canisfamiliaris GGGTACCAAGACCATCGACTCCACGCAGGCGGCACAGGACCTGGCGGGCT -ENSMUST00000005671_homosapiens GAAAACGAAAACCATCGATTCGGTGACTTCTGCTCAAATGCTCCAAGGAT -ENSRNOT00000019267_rattusnorvegicus GAAAACGAAAACCATCGATTCTGTGACGTCTGCCCAGATGCTCCAAGGGT -ENSPTRT00000013802_pantroglodytes GAAAACAAAGACCATTGATTCTGTTACTTCTGCTCAGATGCTCCAAGGAT - * ** ***** ** ** * ** ** ** ** * - -ENSMUST00000091291_musmusculus GCACTGTGATCAACGGTAGCCTGATCATCAACATCCGAGGGGGCAACAAC -ENSCAFT00000026349_canisfamiliaris GCACCCACGTGGAGGGGAGCCTCATCATCAACCTCCGCCAGGGCTACAAC -ENSMUST00000005671_homosapiens GCACCATCCTGAAGGGCAATCTGCTTATTAACATCCGGAGAGGCAATAAC -ENSRNOT00000019267_rattusnorvegicus GCACCATTTTGAAGGGCAATCTGCTTATTAACATCCGGCGAGGCAATAAC -ENSPTRT00000013802_pantroglodytes GCACCATCTTCAAGGGCAATTTGCTCATTAACATCCGACGGGGGAATAAC - **** * * ** * * * ** *** **** ** * *** - -ENSMUST00000091291_musmusculus CTGGCAGCTGAGCTGGAGGCTAACCTTGGCCTCATTGAAGAAATTTCGGG -ENSCAFT00000026349_canisfamiliaris CTAGAGCTGGAGCTGCAACAGAGCCTGGGGCTGATAGAGACCATCACTGG -ENSMUST00000005671_homosapiens ATTGCCTCGGAGTTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACCGG -ENSRNOT00000019267_rattusnorvegicus ATTGCCTCGGAATTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACTGG -ENSPTRT00000013802_pantroglodytes ATTGCTTCAGAGCTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACGGG - * * ** ** * * * ** ** ** ** * * ** - -ENSMUST00000091291_musmusculus ATTTCTAAAGATCCGCCGCTCCTATGCTCTGGTATCACTTTCTTTCTTCA -ENSCAFT00000026349_canisfamiliaris CTTCCTCAAGATCAAGCACTCCTTTGCCCTCGTGTCCCTGGGCTTTTTCA -ENSMUST00000005671_homosapiens CTACGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTGA -ENSRNOT00000019267_rattusnorvegicus CTACGTGAAGATCCGCCATTCCCATGCCTTGGTCTCCTTGTCCTTCCTGA -ENSPTRT00000013802_pantroglodytes CTACGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTAA - * * ****** * ** *** * ** ** * ** * * - -ENSMUST00000091291_musmusculus GGAAGCTACATCTGATTCGAGGAGAGACCTTGGAAATTGGGAACTATTCT -ENSCAFT00000026349_canisfamiliaris AGAACCTCAAACTCATCCGAGGGGACGCCATGGTGGATGGGAACTACACC -ENSMUST00000005671_homosapiens AGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTGGAAGGGAACTACTCC -ENSRNOT00000019267_rattusnorvegicus AGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAACTACTCC -ENSPTRT00000013802_pantroglodytes AAAACCTTCGCCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAATTACTCC - ** ** ** ** *** ** * ***** ** * - -ENSMUST00000091291_musmusculus TTTTATGCCTTGGACAACCAGAACCTGAGGCAACTCTGGGACTGGAG-CA -ENSCAFT00000026349_canisfamiliaris CTGTATGTGCTGGACAACCAGAACCTACAGCAGCTGGGGGCCTGGGTGGC -ENSMUST00000005671_homosapiens TTCTATGTCCTAGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAA-CC -ENSRNOT00000019267_rattusnorvegicus TTCTATGTCCTGGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAA-CC -ENSPTRT00000013802_pantroglodytes TTCTACGTCCTCGACAACCAGAACTTGCAGCAACTATGGGACTGGGA-CC - * ** * * ************ * *** ** *** **** - -ENSMUST00000091291_musmusculus AACACAACCTCACCATCACTCAGGGCAAGCTCTTCTTCCATTACAACCCG -ENSCAFT00000026349_canisfamiliaris TGCGG-GGCTCACCATTCCCGTGGGCAAGATATACTTCGCTTTCAACCCT -ENSMUST00000005671_homosapiens ACCGGAACCTGACCGTCAGGTCCGGAAAGATGTACTTTGCTTTCAATCCC -ENSRNOT00000019267_rattusnorvegicus ACCGGAACCTGACCGTCAGGTCAGGGAAAATGTACTTCGCTTTCAATCCC -ENSPTRT00000013802_pantroglodytes ACCGCAACCTGACCATCAAAGCAGGGAAAATGTACTTTGCTTTCAATCCC - * ** *** * ** ** * * *** ** *** ** - -ENSMUST00000091291_musmusculus AAACTCTGCTTGTCTGAAATTCACAAGATGGAAGAAGTCTCCGGAACTAA -ENSCAFT00000026349_canisfamiliaris CGCCTCTGCTTGGAGCACATCTACCGCCTGGAAGAGGTGACCGGCACGCG -ENSMUST00000005671_homosapiens AAGCTGTGTGTCTCCGAAATTTACCGCATGGAGGAAGTGACCGGAACCAA -ENSRNOT00000019267_rattusnorvegicus AAGCTGTGTGTCTCTGAAATTTACCGGATGGAGGAGGTGACAGGAACAAA -ENSPTRT00000013802_pantroglodytes AAATTATGTGTTTCCGAAATTTACCGCATGGAGGAAGTGACGGGGACTAA - * ** * * ** ** **** ** ** * ** ** - -ENSMUST00000091291_musmusculus GGGCCGTCAGGAGAGGAACGACATTGCCCTGAAGACCAATGGGGACCAGG -ENSCAFT00000026349_canisfamiliaris GGGACGGCAAAACAAGGCTGAGATCAACCCCCGCACCAACGGAGACCGCG -ENSMUST00000005671_homosapiens GGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAG -ENSRNOT00000019267_rattusnorvegicus GGGACGGCAGAGCAAAGGAGACATAAACACCAGGAACAACGGAGAGCGAG -ENSPTRT00000013802_pantroglodytes AGGGCGCCAAAGCAAAGGGGACATAAACACCAGGAACAACGGGGAGAGAG - ** ** ** * ** ** * * *** ** ** * - -ENSMUST00000091291_musmusculus CATCGTGTGAAAATGAATTGCTTAAATTTTCTTTCATTCGGACATCTTTT -ENSCAFT00000026349_canisfamiliaris CCGCCTGCCAAACTCGCACCCTGCGCTTCGTGTCCAACGTGACGCAAGCT -ENSMUST00000005671_homosapiens CTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTCCACCACGACCTGGAAG -ENSRNOT00000019267_rattusnorvegicus CTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTCCACCACCACCTGGAAG -ENSPTRT00000013802_pantroglodytes CCTCCTGTGAAAGTGACGTCCTGCATTTCACCTCCACCACCACGTCGAAG - * * ** *** * ** ** * ** ** - -ENSMUST00000091291_musmusculus GACAAGATCCTGTTGAGGTGGGAACCCTACTGGCCCCCCGACTTCCGAGA -ENSCAFT00000026349_canisfamiliaris GACAGCATCTTGCTGCGCTGGGAGCGCTACGAGCCGCTGGAGGCTCGGGA -ENSMUST00000005671_homosapiens AACCGAATCATCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGA -ENSRNOT00000019267_rattusnorvegicus AACCGCATCATCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGA -ENSPTRT00000013802_pantroglodytes AATCGCATCATCATAACCTGGCACCGGTACCGGCCCCCTGACTACAGGGA - * *** * * *** * * *** *** * ** * ** - -ENSMUST00000091291_musmusculus TCTCCTGGGATTCATGTTGTTCTACAAAGAGGCCCCTTATCAGAATGTGA -ENSCAFT00000026349_canisfamiliaris CCTGCTCAGCTTCATCGTGTACTACAAGGAGTCCCCATTCCAGAATGCCA -ENSMUST00000005671_homosapiens TCTCATCAGCTTCACAGTTTACTACAAGGAGGCACCATTTAAAAACGTTA -ENSRNOT00000019267_rattusnorvegicus TCTCATCAGTTTCACAGTCTACTACAAGGAGGCACCCTTTAAAAACGTCA -ENSPTRT00000013802_pantroglodytes TCTCATCAGCTTCACCGTTTACTACAAGGAAGCACCCTTTAAGAATGTCA - ** * * **** * * ****** ** * ** * * ** * * - -ENSMUST00000091291_musmusculus CAGAGTTTGATGGGCAGGATGCTTGTGGCTCCAACAGCTGGACTGTGGTG -ENSCAFT00000026349_canisfamiliaris CAGAGCACACAGGTCCAGATGCCTGTGGAACCCAGAGCTGGAACCTGCTG -ENSMUST00000005671_homosapiens CGGAATATGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTG -ENSRNOT00000019267_rattusnorvegicus CGGAATACGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTG -ENSPTRT00000013802_pantroglodytes CGGAGTATGATGGGCAGGACGCCTGCGGCTCCAACAGCTGGAACATGGTG - * ** ** * ** ** ** ** ** * ******* ** ** - -ENSMUST00000091291_musmusculus GATATTGACCCGCCCCAGAGGTCCAACGACCCCAAGTCTCAGACCCCAAG -ENSCAFT00000026349_canisfamiliaris GATGTGGAGCTGCCCTTAAG---CCGCACCC--------AAGAACC---- -ENSMUST00000005671_homosapiens GATGTAGACCTGCCTCCGAA---CAAGGAGG--------GCGAGCC---- -ENSRNOT00000019267_rattusnorvegicus GACGTGGACCTGCCTCCGAA---CAAGGAGG--------GGGAGCC---- -ENSPTRT00000013802_pantroglodytes GACGTGGACCTCCCGCCCAA---CAAGGACG--------TGGAGCC---- - ** * ** * ** * * ** ** - -ENSMUST00000091291_musmusculus CCACCCTGGGTGGCTGAT-GCGGGGCCTCAAACCCTGGACCCAATACGCC -ENSCAFT00000026349_canisfamiliaris -----CGGGGT-AACTCTAGCA-CCCCTCAAGCCCTGGACACAATATGCA -ENSMUST00000005671_homosapiens -----TGGCAT-TTTACT-GCATGGGCTGAAGCCCTGGACCCAGTATGCT -ENSRNOT00000019267_rattusnorvegicus -----TGGCAT-TTTGCT-GCATGGGCTGAAGCCCTGGACCCAGTATGCA -ENSPTRT00000013802_pantroglodytes -----CGGCAT-CTTACT-ACATGGGCTGAAGCCCTGGACTCAGTACGCC - * * * * ** ** ******** ** ** ** - -ENSMUST00000091291_musmusculus ATCTTTGTGAAGACCTTGG---TTACCTTCTCTGATGAACGGC-GGACCT -ENSCAFT00000026349_canisfamiliaris GTGTTTGTACGGGCCATCACACTGACCACTG-CTGAGGACAGCCCCCACC -ENSMUST00000005671_homosapiens GTCTATGTCAAGGCTGTGACCCTCACCATGG-TGGAAAACGACCATATCC -ENSRNOT00000019267_rattusnorvegicus GTCTATGTCAAGGCTGTGACCCTCACCATGG-TGGAAAACGACCACATCC -ENSPTRT00000013802_pantroglodytes GTTTACGTCAAGGCTGTGACCCTCACCATGG-TGGAGAATGACCATATCC - * * ** * * * * *** * * * - -ENSMUST00000091291_musmusculus ATGGAGCCAAAAGTGATATCATCTATGTGCAAACAGATGCCACTAATCCT -ENSCAFT00000026349_canisfamiliaris AAGGAGCCCAGAGCCCCATCGTCTACCTCCGAACCCTGCCTGCGGCGCCC -ENSMUST00000005671_homosapiens GTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAATGCTTCAGTCCCT -ENSRNOT00000019267_rattusnorvegicus GTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAACGCTTCAGTTCCT -ENSPTRT00000013802_pantroglodytes GTGGGGCCAAGAGTGAGATCTTGTACATTCGCACCAATGCTTCAGTTCCT - ** *** * ** *** * ** * * ** * * ** - -ENSMUST00000091291_musmusculus TCTGTCCCCCTGGATCCCATATCAGTTTCTAATTCCTCATCTCAGATTAT -ENSCAFT00000026349_canisfamiliaris ACTGTGCCCCAGGACGTCATCTCCACGTCCAATTCCTCGTCCCACCTGCT -ENSMUST00000005671_homosapiens TCCATTCCCCTAGATGTCCTCTCAGCATCAAACTCTTCCTCTCAGCTGAT -ENSRNOT00000019267_rattusnorvegicus TCCATTCCTCTAGATGTCCTCTCGGCATCAAACTCCTCCTCTCAGCTGAT -ENSPTRT00000013802_pantroglodytes TCCATTCCCTTGGACGTTCTTTCAGCATCGAACTCCTCTTCTCAGTTAAT - * * ** ** * ** ** ** ** ** ** ** * * - -ENSMUST00000091291_musmusculus CTTAAAGTGGAAGCCCCCCTCTGACCCCAATGGCAACATCACACACTACC -ENSCAFT00000026349_canisfamiliaris CGTGCGCTGGAAGCCACCGATTCAGCGCAACGGGAACATCACCTACTACC -ENSMUST00000005671_homosapiens TGTGAAGTGGAATCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACA -ENSRNOT00000019267_rattusnorvegicus CGTGAAGTGGAACCCCCCAACTCTGCCCAATGGTAACTTGAGTTACTACA -ENSPTRT00000013802_pantroglodytes CGTGAAGTGGAACCCTCCCTCTCTGCCCAACGGCAACCTGAGTTACTACA - * ***** ** ** * * *** ** *** * * ***** - -ENSMUST00000091291_musmusculus TGGTGTACTGGGAGAGGCAAGCAGAGGACAGCGAGCTGTTTGAGCTGGAT -ENSCAFT00000026349_canisfamiliaris TGGTGCTGTGGCAGCGTCTGGCGGAGGACGGCGACCTCTATCTCAACGAC -ENSMUST00000005671_homosapiens TTGTGAGGTGGCAGCGGCAGCCCCAGGATGGTTACCTGTACCGGCACAAC -ENSRNOT00000019267_rattusnorvegicus TTGTGAGGTGGCAGCGGCAGCCGCAGGATGGCTATCTGTTCCGGCACAAC -ENSPTRT00000013802_pantroglodytes TTGTGCGCTGGCAGCGGCAGCCTCAGGACGGCTACCTTTACCGGCACAAT - * *** *** ** * * * **** * * ** * * - -ENSMUST00000091291_musmusculus TATTGTCTCAAAGGGCTGA-AGCTCCCTTCACGGACCTGGTC---CCCAC -ENSCAFT00000026349_canisfamiliaris TACTGCCACCGCGGCCTGCGGCTGCCCACCAGCAACAACGAC---CCGC- -ENSMUST00000005671_homosapiens TACTGCTCCAAAGA-CAA--AATACCCATCAGAAAGTACGCCGATGGTA- -ENSRNOT00000019267_rattusnorvegicus TACTGCTCCAAAGA-CAA--AATACCCATCAGAAAGTACGCCGATGGTA- -ENSPTRT00000013802_pantroglodytes TACTGCTCCAAAGA-CAA--AATCCCCATCAGGAAGTATGCCGACGGCA- - ** ** * * * *** ** * * * - -ENSMUST00000091291_musmusculus CCTTTGAGTCTGATGAT-T--CTCAGAAGCACAA-TCAGA-GT-GAGTA- -ENSCAFT00000026349_canisfamiliaris GCTTCGACCGCGAGGA-----CGGTGAACTCGAAG-CCGAGATGGAGCC- -ENSMUST00000005671_homosapiens CCATCGACGTGGAGGAGGTGACGGAAAATCCCAAGACAGAAGT-GTGTGG -ENSRNOT00000019267_rattusnorvegicus CCATCGATGTGGAGGAGGTGACAGAAAATCCCAAGACAGAAGT-GTGCGG -ENSPTRT00000013802_pantroglodytes CCATCGACATTGAGGAGGTCACAGAGAACCCCAAGACTGAGGT-GTGTGG - * * ** ** ** * ** ** * ** * * * - -ENSMUST00000091291_musmusculus TGACGACTCGGCCAGTGAGTGC-TGCTCATGCCC-TAAGACTGACTCTCA -ENSCAFT00000026349_canisfamiliaris -GG-GCTGC----TGCCCTTGCCAGCACCCACCGCCTGGGCAG--GTCCT -ENSMUST00000005671_homosapiens TGGTGATAA---AGGGCCATGC-TGCGCTTGCCC-TAAAACTGAAGCTGA -ENSRNOT00000019267_rattusnorvegicus TGGTGATAA---AGGGCCGTGC-TGTGCCTGTCC-TAAAACCGAAGCTGA -ENSPTRT00000013802_pantroglodytes TGGGGAGAA---AGGGCCTTGC-TGCGCCTGCCC-CAAAACTGAAGCCGA - * * * *** * * * * * - -ENSMUST00000091291_musmusculus GATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCTTCGAGGATT -ENSCAFT00000026349_canisfamiliaris GCCGCCGCTGGAGGCGCAAGAGGCCTCGTTCCAGAAGAAGTTCGAAAACT -ENSMUST00000005671_homosapiens GAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATT -ENSRNOT00000019267_rattusnorvegicus GAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATT -ENSPTRT00000013802_pantroglodytes GAAGCAGGCCGAGAAGGAGGAGGCTGAATACCGCAAAGTCTTTGAGAATT - * * * *** * * *** * * * ** ** ** * * - -ENSMUST00000091291_musmusculus ACCTGCACAACGTGGTTTTTGTCCCCAGGCCATCCCGAAAGCGAAGATCC -ENSCAFT00000026349_canisfamiliaris TCCTGCACAACGCCATCACCATCCCCAAGTCCCCCTGGAAGGTGACGTCC -ENSMUST00000005671_homosapiens TCCTTCACAATTCCATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGAC -ENSRNOT00000019267_rattusnorvegicus TCCTTCACAACTCCATCTTTGTGCCCAGACCTGAGAGGAGGCGGAGAGAT -ENSPTRT00000013802_pantroglodytes TCCTGCACAACTCCATCTTCGTGCCCAGACCTGAAAGGAAGCGGAGAGAT - *** ***** * * **** * * * * * - -ENSMUST00000091291_musmusculus CTTGAAGAGGTGGGGAATGTGACA---GCCACCACACTCA-CACTTCCAG -ENSCAFT00000026349_canisfamiliaris GTCA-ATAAGAGCCCTCAAAGA-------CATGCGG-GGAGGCACCGCCG -ENSMUST00000005671_homosapiens GTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCAC -ENSRNOT00000019267_rattusnorvegicus GTCCTGCAGGTGGCTAACACCACCATGTCCAGCCGAAGCAGGAACACCAC -ENSPTRT00000013802_pantroglodytes GTCATGCAAGTGGCCAACACCACCATGTCCAGCCGAAGCAGGAACACCAC - * * * * * ** * * - -ENSMUST00000091291_musmusculus ATTTCCCCAACGT-CTCCTCTACCATTGTGCCC-ACAAGTCAG-G-AGGA -ENSCAFT00000026349_canisfamiliaris GGC-GGCCGGGGCGCTCC---GGCTTGGGGGC--AACAGCTCG-----GA -ENSMUST00000005671_homosapiens GGT-AGCTGACAC-CTACAATATCACAGACCCGGAGGAGTTCGAGACAGA -ENSRNOT00000019267_rattusnorvegicus GGT-AGCTGACAC-CTACAATATCACAGACCCGGAAGAGTTCGAGACAGA -ENSPTRT00000013802_pantroglodytes GGC-CGCAGACAC-CTACAACATCACCGACCCGGAAGAGCTGGAGACAGA - * ** * * * * * ** * ** - -ENSMUST00000091291_musmusculus GCACAGGCCATTTGAGA---AAGTGGTGAACAAGGAGTCACTTGTCATCT -ENSCAFT00000026349_canisfamiliaris TTTCGAGATCCAGGAGGACAAAGTGC---CCCGGGAGCGAGCAGTGTTGA -ENSMUST00000005671_homosapiens GTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATCT -ENSRNOT00000019267_rattusnorvegicus ATACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATTT -ENSPTRT00000013802_pantroglodytes GTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGAACTGTGATTT - * *** **** * **** ** * - -ENSMUST00000091291_musmusculus CTGGCCTGAGACACTTCACTGGGTACCGCATTGAGCTGCAGGCATGCAAT -ENSCAFT00000026349_canisfamiliaris GTGGTCTGCGCCACTTTACGGAATATCGTATCGACATCCACGCCTGCAAC -ENSMUST00000005671_homosapiens CCAACCTCCGGCCTTTCACTCTGTACCGCATCGATATCCACAGCTGCAAC -ENSRNOT00000019267_rattusnorvegicus CCAACCTCCGGCCTTTCACTCTGTACCGTATCGATATCCACAGCTGCAAC -ENSPTRT00000013802_pantroglodytes CTAACCTTCGGCCTTTCACATTGTACCGCATCGATATCCACAGCTGCAAC - ** * * ** ** ** ** ** ** * ** ***** - -ENSMUST00000091291_musmusculus CAAGATTCCCCAGAT-GAGAGGTGCAGTGTGGCTGCCTACGTCAGTGCCC -ENSCAFT00000026349_canisfamiliaris CACGCGGCT-CACACCGTGGGCTGCAGCGCGGCCACGTTCGTCTTCGCGC -ENSMUST00000005671_homosapiens CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTCGTCTTTGCGA -ENSRNOT00000019267_rattusnorvegicus CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTTGTCTTTGCAA -ENSPTRT00000013802_pantroglodytes CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTTGTCTTTGCAA - ** * * * * * * ***** * * * *** ** - -ENSMUST00000091291_musmusculus GGACCATGCCTGAAGCTAAGGCAGATGACATCGTTGGCCCTGTGACTCAT -ENSCAFT00000026349_canisfamiliaris GCACCATGCCGCACAGAGAAGCTGATGGCATCCCAGGGAAGGTGGCCTGG -ENSMUST00000005671_homosapiens GAACCATGCCAGCAGAAGGAGCAGATGATATCCCTGGTCCGGTGACCTGG -ENSRNOT00000019267_rattusnorvegicus GAACCATGCCAGCAGAAGGAGCAGATGACATTCCTGGCCCAGTGACCTGG -ENSPTRT00000013802_pantroglodytes GGACTATGCCCGCAGAAGGAGCAGATGACATTCCTGGGCCAGTGACCTGG - * ** ***** ** **** ** ** *** * - -ENSMUST00000091291_musmusculus GAA---ATCTTTGAGAACAATGTTGTACACTTAATGTGGCAAGAGCCAAA -ENSCAFT00000026349_canisfamiliaris GAGGCAGCCAGCAAAAGC---AGTGTCCTCCTGCGCTGGCTGGAGCCACC -ENSMUST00000005671_homosapiens GAGCCAAGACCCGAAAAC---TCCATCTTTTTAAAGTGGCCAGAACCCGA -ENSRNOT00000019267_rattusnorvegicus GAGCCAAGACCTGAAAAC---TCCATCTTTTTAAAGTGGCCAGAACCCGA -ENSPTRT00000013802_pantroglodytes GAGCCAAGGCCTGAAAAC---TCCATCTTTTTAAAGTGGCCGGAACCTGA - ** * * * * * **** ** ** - -ENSMUST00000091291_musmusculus GGAACCTAATGGTCTGATTGTGCTATATGAAGTGAGCTATCGCCGATATG -ENSCAFT00000026349_canisfamiliaris TGACCCCAACGGACTCATCCTCAAGTATGAAATCAAGTACCGCCGCTTGG -ENSMUST00000005671_homosapiens GAACCCCAACGGATTGATCCTAATGTATGAAATTAAATACGGGTCGCAA- -ENSRNOT00000019267_rattusnorvegicus GAACCCCAACGGATTGATTCTAATGTATGAAATAAAATACGGATCGCAA- -ENSPTRT00000013802_pantroglodytes GAATCCCAATGGATTGATTCTAATGTATGAAATAAAATACGGATCACAA- - * ** ** ** * ** * ****** * * ** * - -ENSMUST00000091291_musmusculus GTGATGAGGAG-CTGCACCTCTGTGTCTCCCGGAAGCATTTTGCCCTGGA -ENSCAFT00000026349_canisfamiliaris GAGAGGAGGCCACAGT-GCTATGTGTGTCCCGCCTACGATATGCCAAATT -ENSMUST00000005671_homosapiens --GTCGAGGAT-CAGCGGGAATGTGTGTCCAGACAGGAGTACAGGAAGTA -ENSRNOT00000019267_rattusnorvegicus --GTCGAGGAT-CAGCGGGAATGTGTGTCCAGACAGGAGTACAGGAAGTA -ENSPTRT00000013802_pantroglodytes --GTTGAGGAT-CAGCGAGAATGTGTGTCCAGACAGGAATACAGGAAGTA - * **** * * ***** *** * * - -ENSMUST00000091291_musmusculus GCGGGGCTGCAGGCTGCGAGGGCTCTCCCCAGGAAACTACAGTGTTCGAG -ENSCAFT00000026349_canisfamiliaris TGGGGGTGTCCAGCTGGCCCTGCTGCCCCCTGGAAACTACTCCGCCAGAG -ENSMUST00000005671_homosapiens CGGAGGGGCCAAACTCAACCGTCTAAACCCAGGGAACTATACAGCCCGGA -ENSRNOT00000019267_rattusnorvegicus TGGAGGGGCCAAACTTAACCGTCTAAACCCAGGGAACTATACGGCCCGGA -ENSPTRT00000013802_pantroglodytes TGGAGGGGCCAAGCTAAACCGGCTAAACCCGGGGAACTACACAGCCCGGA - * ** * ** ** *** ** ***** * * - -ENSMUST00000091291_musmusculus TCCGGGCTACCTCTCTGGCAGGAAATGGCTCCTGGACAGAACCCACCTAT -ENSCAFT00000026349_canisfamiliaris TTCGGGCAACCTCGCTGGCTGGCAACGGCTCCTGGACAGAAAGTATCGCT -ENSMUST00000005671_homosapiens TTCAGGCTACCTCCCTCTCTGGGAATGGGTCATGGACAGATCCTGTGTTC -ENSRNOT00000019267_rattusnorvegicus TTCAGGCTACCTCCCTCTCTGGGAATGGGTCGTGGACAGATCCTGTGTTC -ENSPTRT00000013802_pantroglodytes TTCAGGCCACATCTCTCTCTGGGAATGGGTCGTGGACAGATCCTGTGTTC - * * *** ** ** ** * ** ** ** ** ******** - -ENSMUST00000091291_musmusculus TTTTATGTGACTGAT-TATTTAGATGTCCCATCAAA-TATTGCCAAAATT -ENSCAFT00000026349_canisfamiliaris TTCTACGTCCCAGGCCCA----GAGG----AGGAAGACTCCGGGGGGCTG -ENSMUST00000005671_homosapiens TTCTATGTCCCCGCC-AA----AACGACGTATGAGAACTTCATGCATCTG -ENSRNOT00000019267_rattusnorvegicus TTCTATGTCCCAGCC-AA----AACAACGTATGAGAATTTCATGCATCTG -ENSPTRT00000013802_pantroglodytes TTCTATGTCCAGGCC-AA----AACAGGATATGAAAACTTCATCCATCTG - ** ** ** * * * * * * - -ENSMUST00000091291_musmusculus ATCATTGGACCCCTCATCTTTGTCTTCCTCTTCAGTGTTG--TGATTGGA -ENSCAFT00000026349_canisfamiliaris CACGTCCTTCTCACTG---TCACCCCCGTGGGGCTCAT------GCTGTT -ENSMUST00000005671_homosapiens ATCATTGCTCTGCCGG---TTGCCATCCTGCTGATCGTTGGGGGGCTGGT -ENSRNOT00000019267_rattusnorvegicus ATCATTGCTCTGCCGG---TTGCCATCCTGCTGATTGTGGGGGGCCTGGT -ENSPTRT00000013802_pantroglodytes ATCATCGCTCTGCCCG---TCGCTGTCCTGTTGATCGTGGGAGGGTTGGT - * * * * * * * ** - -ENSMUST00000091291_musmusculus -AGTAT---TTATCTATTTCTGAGAAAGAGG-----CAGCCGGATGGGCC -ENSCAFT00000026349_canisfamiliaris CATCATTCTTGCCGCCCTCGGTTTCTTC------TACGGCAGGAAGAG-A -ENSMUST00000005671_homosapiens TATCATGCTGTATGTCTTCCATAGAAAGAGAAATAACAGCAGGTTGGG-C -ENSRNOT00000019267_rattusnorvegicus AATCATGCTGTATGTCTTCCATAGAAAGAGG-------G-TGTCTGGGCC -ENSPTRT00000013802_pantroglodytes GATTATGCTGTACGTCTTCCATAGAAAGAGAAATAACAGCAGGCTGGG-G - * ** * * * * * - -ENSMUST00000091291_musmusculus AATGGGACCACTGTATGCATCTTCAAACCCTGAGTACCT-CAGTGCCAGT -ENSCAFT00000026349_canisfamiliaris AACAG-CACCCTCTATGCCTCAGTGAATCCGGAGTACTT-CAGCGCCTCT -ENSMUST00000005671_homosapiens AATGG-AGTGCTGTATGCTTCTGTGAACCCCGAGTATTT-CAGCGCAGCT -ENSRNOT00000019267_rattusnorvegicus AGCAG-AAGGCAGTAG----TTGGAAA---GGGCCATTTCCATCCTGTCT -ENSPTRT00000013802_pantroglodytes AATGG-AGTGCTGTATGCCTCTGTGAACCCGGAGTACTT-CAGCGCTGCT - * * * ** ** * * * ** * - -ENSMUST00000091291_musmusculus GATGTGTTTCCATCTTCTGTGTACGTGCCGGACGAGTGGGAGGTGCCTCG -ENSCAFT00000026349_canisfamiliaris GAT---------------ATGTACATCCCTGATGAGTGGGAGGTGCCTCG -ENSMUST00000005671_homosapiens GAT---------------GTGTACGTGCCTGATGAATGGGAGGTAGCTCG -ENSRNOT00000019267_rattusnorvegicus GTT----------C-CTAGTGTACGTGCCTGATGAATGGGAGGTAGCTCG -ENSPTRT00000013802_pantroglodytes GAT---------------GTGTACGTTCCCGATGAGTGGGAGGTGGCTCG - * * ***** * ** ** ** ******** **** - -ENSMUST00000091291_musmusculus AGAGAAGATCACCCTTCTTCGAGAGCTGGGGCAGGGATCCTTTGGTATGG -ENSCAFT00000026349_canisfamiliaris GGAGCAGATCTCCATAATCCGAGAGCTGGGCCAGGGCTCCTTTGGGATGG -ENSMUST00000005671_homosapiens AGAGAAGATCACCATGAACCGGGAGCTCGGACAAGGGTCCTTTGGGATGG -ENSRNOT00000019267_rattusnorvegicus GGAGAAGATCACCATGAACCGGGAGCTCGGACAAGGGTCCTTCGGGATGG -ENSPTRT00000013802_pantroglodytes GGAGAAGATCACCATGAGCCGGGAACTTGGGCAGGGGTCCTTTGGGATGG - *** ***** ** * ** ** ** ** ** ** ***** ** **** - -ENSMUST00000091291_musmusculus TGTATGAAGGCAATGC-CAAGGATA--TCATCAAGGGTGAGGCAGAGACC -ENSCAFT00000026349_canisfamiliaris TATATGAAGGCCTGGCACAAGGACTAGAGGCTGGAGAGGAGTCC-ACACC -ENSMUST00000005671_homosapiens TCTATGAAGGAGTGGC-CAAGGGTG--TGGTCAAGGATGAACCCGAAACC -ENSRNOT00000019267_rattusnorvegicus TCTATGAAGGAGTGGC-CAAGGGCG--TGGTCAAGGACGAGCCTGAAACC -ENSPTRT00000013802_pantroglodytes TCTATGAAGGAGTTGC-CAAGGGTG--TGGTGAAAGATGAACCTGAAACC - * ******** ** ***** * ** * * *** - -ENSMUST00000091291_musmusculus CGTGTTGCGGTTAAGACTGTCAATGAGTCAGCCAGTCTTCGAGAACGGAT -ENSCAFT00000026349_canisfamiliaris C--GTGGCCCTGAAGACAGTGAATGAGTTGGCCAGCCCACGAGAACGCAT -ENSMUST00000005671_homosapiens AGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGTATGCGTGAAAGAAT -ENSRNOT00000019267_rattusnorvegicus AGAGTGGCCATCAAGACAGTGAATGAGGCTGCAAGTATGCGTGAGAGAAT -ENSPTRT00000013802_pantroglodytes AGAGTGGCCATTAAAACAGTGAACGAGGCCGCAAGCATGCGTGAAAGGAT - ** ** * ** ** ** ** *** ** ** ** ** * ** - -ENSMUST00000091291_musmusculus CGAGTTCCTCAATGAGGCATCAGTCATGAAGGGATTCACCTGCCATCATG -ENSCAFT00000026349_canisfamiliaris TGAGTTCCTCAAGGAAGCTTCTGTCATGAAGGCATTCAAGTGTCACCATG -ENSMUST00000005671_homosapiens CGAGTTTCTCAACGAGGCCTCGGTGATGAAGGAGTTCAATTGTCACCATG -ENSRNOT00000019267_rattusnorvegicus TGAGTTTCTCAACGAGGCCTCAGTGATGAAGGAGTTCAACTGTCACCATG -ENSPTRT00000013802_pantroglodytes TGAGTTTCTCAACGAAGCTTCTGTGATGAAGGAGTTCAATTGTCACCATG - ***** ***** ** ** ** ** ******* **** ** ** **** - -ENSMUST00000091291_musmusculus TGGTCCGCCTTCTTGGGGTGGTATCCAAAGGACAGCCAACGCTGGTAGTG -ENSCAFT00000026349_canisfamiliaris TGGTACGTCTCCTGGGTGTTGTGTCTCAAGGCCAGCCAACTCTGGTCATC -ENSMUST00000005671_homosapiens TGGTCCGGTTGCTGGGTGTGGTATCCCAAGGCCAGCCCACCCTGGTCATC -ENSRNOT00000019267_rattusnorvegicus TGGTCCGGTTGCTGGGTGTAGTATCCCAAGGCCAGCCCACCCTGGTCATC -ENSPTRT00000013802_pantroglodytes TGGTGCGATTGCTGGGTGTGGTGTCCCAAGGCCAGCCAACACTGGTCATC - **** ** * ** ** ** ** ** **** ***** ** ***** * - -ENSMUST00000091291_musmusculus ATGGAATTGATGGCTCATGGAGACCTGAAAAGTCACCTCCGTTCTCTGAG -ENSCAFT00000026349_canisfamiliaris ATGGAGTTAATGACTCGTGGGGACCTCAAGAGCCATCTTCGATCTCTGCG -ENSMUST00000005671_homosapiens ATGGAACTAATGACACGCGGTGATCTCAAAAGTTATCTCCGGTCTCTGAG -ENSRNOT00000019267_rattusnorvegicus ATGGAACTAATGACACGTGGCGATCTCAAAAGTTATCTCCGGTCTCTAAG -ENSPTRT00000013802_pantroglodytes ATGGAACTGATGACACGGGGCGATCTCAAAAGTTATCTCCGGTCTCTGAG - ***** * *** * * ** ** ** ** ** * ** ** ***** * - -ENSMUST00000091291_musmusculus GCCAGATGCTGA---GAATAACCCAGGCCGCCCTCCCCCTACCTTGCAAG -ENSCAFT00000026349_canisfamiliaris GCCTGAGGCAGA---GAACAACCCTGGGCTCCCACGGCCAGCACTGGGAG -ENSMUST00000005671_homosapiens GCCAGAAGTGGAGCAGAATAATCTAGTCCTCATTCCTCCGAGCTTAAGCA -ENSRNOT00000019267_rattusnorvegicus GCCAGAGGTGGA---GAATAATCTAGTCCTGATTCCTCCGAGCTTAAGCA -ENSPTRT00000013802_pantroglodytes GCCAGAAATGGA---GAATAATCCAGTCCTAGCACCTCCAAGCCTGAGCA - *** ** ** *** ** * * * * ** * - -ENSMUST00000091291_musmusculus AAATGATTCAGATGACAGCAGAAATTGCTGATGGCATGGCATACTTGAAC -ENSCAFT00000026349_canisfamiliaris ATATGATCCAGATGGCTGGTGAGATTGCAGATGGCATGGCTTACCTCGCT -ENSMUST00000005671_homosapiens AGATGATCCAGATGGCTGGAGAGATTGCAGATGGCATGGCCTACCTCAAT -ENSRNOT00000019267_rattusnorvegicus AGATGATCCAGATGGCTGGAGAGATTGCAGATGGCATGGCCTACCTCAAT -ENSPTRT00000013802_pantroglodytes AGATGATTCAGATGGCCGGAGAGATTGCAGACGGCATGGCATACCTCAAC - * ***** ****** * * ** ***** ** ******** *** * - -ENSMUST00000091291_musmusculus GCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGAAACTGCATGGTTGC -ENSCAFT00000026349_canisfamiliaris GCCAACAAGTTTGTGCATCGAGACCTGGCAGCCAGAAACTGCATGGTGTC -ENSMUST00000005671_homosapiens GCCAACAAGTTCGTCCACAGAGACCTTGCTGCTAGGAACTGCATGGTAGC -ENSRNOT00000019267_rattusnorvegicus GCCAACAAGTTCGTCCACAGAGACCTGGCTGCTCGGAACTGCATGGTAGC -ENSPTRT00000013802_pantroglodytes GCCAATAAGTTCGTCCACAGAGACCTTGCTGCCCGGAATTGCATGGTAGC - ***** ***** ** ** * ***** ** ** * ** ******** * - -ENSMUST00000091291_musmusculus CCATGATTTTACTGTCAAAATTGGAGACTTTGGAATGACAAGGGACATCT -ENSCAFT00000026349_canisfamiliaris CCAGGACTTCACCGTCAAGATTGGGGACTTCGGGATGACTCGAGACGTGT -ENSMUST00000005671_homosapiens CGAAGATTTCACAGTCAAAATTGGAGATTTCGGTATGACACGAGACATCT -ENSRNOT00000019267_rattusnorvegicus TGAAGATTTCACAGTCAAAATTGGAGATTTTGGTATGACACGAGACATCT -ENSPTRT00000013802_pantroglodytes CGAAGATTTCACAGTCAAAATCGGAGATTTTGGTATGACGCGAGATATCT - * ** ** ** ***** ** ** ** ** ** ***** * ** * * - -ENSMUST00000091291_musmusculus ACGAGACAGATTACTATCGGAAAGGGGGCAAGGGACTGCTTCCTGTGAGG -ENSCAFT00000026349_canisfamiliaris ACGAGACAGACTATTACCGCAAGGGCGGGAAAGGGCTGCTGCCCGTGCGC -ENSMUST00000005671_homosapiens ACGAGACGGACTACTACCGGAAAGGCGGGAAGGGGTTGCTGCCTGTGCGC -ENSRNOT00000019267_rattusnorvegicus ACGAGACGGACTACTACCGGAAAGGCGGGAAGGGCTTGCTGCCTGTGCGC -ENSPTRT00000013802_pantroglodytes ATGAGACAGACTATTACCGGAAAGGAGGGAAAGGGCTGCTGCCCGTGCGC - * ***** ** ** ** ** ** ** ** ** ** **** ** *** * - -ENSMUST00000091291_musmusculus TGGATGTCACCTGAGTCCCTGAAGGATGGAGTCTTTACTGCTTCTTCTGA -ENSCAFT00000026349_canisfamiliaris TGGATGGCCCCCGAGTCCCTCAAAGATGGAATCTTCACCACACATTCGGA -ENSMUST00000005671_homosapiens TGGATGTCTCCCGAGTCCCTCAAGGATGGTGTCTTCACTACTCATTCTGA -ENSRNOT00000019267_rattusnorvegicus TGGATGTCTCCCGAGTCCCTCAAGGATGGCGTCTTCACCACTCATTCCGA -ENSPTRT00000013802_pantroglodytes TGGATGTCTCCCGAGTCCCTCAAGGATGGAGTCTTCACCACTTACTCGGA - ****** * ** ******** ** ***** **** ** * ** ** - -ENSMUST00000091291_musmusculus TATGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACTAGCCTGGCTGAGC -ENSCAFT00000026349_canisfamiliaris TGTTTGGTCCTTCGGGGTGGTGCTCTGGGAGATCGTGACCCTAGCTGAAC -ENSMUST00000005671_homosapiens TGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACGCTGGCTGAGC -ENSRNOT00000019267_rattusnorvegicus TGTCTGGTCCTTTGGGGTCGTCCTCTGGGAGATCGCCACTCTGGCTGAGC -ENSPTRT00000013802_pantroglodytes CGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACACTGGCCGAGC - * ******** ***** ** ** ***** *** * ** ** ** * - -ENSMUST00000091291_musmusculus AACCTTATCAAGGCCTGTCTAATGAACAGGTGTTGAAGTTTGTCATGGAT -ENSCAFT00000026349_canisfamiliaris AGCCCTACCAGGGTTTATCCAACGAGCAGGTGCTCAAGTTTGTCATGGAT -ENSMUST00000005671_homosapiens AGCCCTACCAGGGCTTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAG -ENSRNOT00000019267_rattusnorvegicus AGCCGTACCAGGGCCTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAG -ENSPTRT00000013802_pantroglodytes AGCCCTACCAGGGCTTGTCCAACGAGCAAGTCCTTCGCTTCGTCATGGAG - * ** ** ** ** * ** ** ** ** ** * ** ******** - -ENSMUST00000091291_musmusculus GGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTCACTGACCT -ENSCAFT00000026349_canisfamiliaris GGTGGGGTCCTGGAGGAGCTGGAGAGCTGTCCCCTTCAGCTGCAAGAACT -ENSMUST00000005671_homosapiens GGTGGCCTTCTGGACAAGCCGGACAACTGCCCTGATATGCTGTTTGAACT -ENSRNOT00000019267_rattusnorvegicus GGCGGCCTTCTGGACAAGCCGGATAACTGCCCCGATATGCTGTTTGAACT -ENSPTRT00000013802_pantroglodytes GGCGGCCTTCTGGACAAGCCAGACAACTGTCCCGACATGCTGTTTGAACT - ** ** ***** * ** * *** ** ** ** ** - -ENSMUST00000091291_musmusculus GATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAGGCCAACCTTCCTGG -ENSCAFT00000026349_canisfamiliaris GATGAGCCGCTGCTGGCAGCAGAACCCACGCCTGCGGCCCACCTTCACCC -ENSMUST00000005671_homosapiens TATGCGCATGTGCTGGCAGTATAACCCCAAGATGCGGCCCTCCTTCCTGG -ENSRNOT00000019267_rattusnorvegicus TATGCGCATGTGCTGGCAGTACAACCCCAAGATGCGGCCCTCCTTCCTGG -ENSPTRT00000013802_pantroglodytes GATGCGCATGTGCTGGCAGTATAACCCCAAGATGAGGCCTTCCTTCCTGG - *** ** ********* ***** ** **** ***** - -ENSMUST00000091291_musmusculus AAATCGTCAACCTGCTCAAGGATGACCTCCACCCCAGCTTTCCAGAAGTT -ENSCAFT00000026349_canisfamiliaris ACATCCTGGACAGCATTCGGGGGGAACTGCGGCCCTCTTTCCGCCTCTTT -ENSMUST00000005671_homosapiens AGATCATCGGCAGCATCAAGGATGAGATGGAGCCCAGCTTCCAGGAGGTC -ENSRNOT00000019267_rattusnorvegicus AGATCATCGGAAGCATCAAGGATGAGATGGAGCCCAGTTTCCAGGAGGTC -ENSPTRT00000013802_pantroglodytes AGATCATCAGCAGCATCAAAGAGGAGATGGAGCCTGGCTTCCGGGAGGTC - * *** * * * ** * ** ** * * - -ENSMUST00000091291_musmusculus TCCTTCTTCTACAGCGAGGAGAACAAGGCTCCTGAGAGTGAGGAGCTGGA -ENSCAFT00000026349_canisfamiliaris TCCTTCTATTACAGCCCAGAGTG-------------CCAGGGGAGCCAGG -ENSMUST00000005671_homosapiens TCCTTCTACTACAGCGAGGAGAACAAGCCTCCCGAGCCAGAGGAGCTGGA -ENSRNOT00000019267_rattusnorvegicus TCCTTCTACTACAGCGAGGAGAACAAGCCTCCAGAGCCGGAGGAGCTGGA -ENSPTRT00000013802_pantroglodytes TCCTTCTACTACAGCGAGGAGAACAAGCTGCCCGAGCCGGAGGAGCTGGA - ******* ****** *** * ***** * - -ENSMUST00000091291_musmusculus ----GAT------------GGAGTTTGAAGACATGGAGAATGTCCCGTTG -ENSCAFT00000026349_canisfamiliaris GGGCCCT------------GCTGCCTAATGCC-----------------A -ENSMUST00000005671_homosapiens ----GAT------------GGAGCCTGAGAACATGGAGAGCGTCCCACTG -ENSRNOT00000019267_rattusnorvegicus ----GATGGAGCTGGAGCTGGAGCCCGAGAACATGGAGAGCGTCCCGCTG -ENSPTRT00000013802_pantroglodytes ----CCT------------GGAGCCAGAGAACATGGAGAGCGTCCCCCTG - * * * * * - -ENSMUST00000091291_musmusculus GATCGTTC----------------CTCTCACTGTCAGAGAGAA---GAG- -ENSCAFT00000026349_canisfamiliaris AACCCAA-------------CTCCCTACCA-----------A-------- -ENSMUST00000005671_homosapiens GACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGG -ENSRNOT00000019267_rattusnorvegicus GACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGG -ENSPTRT00000013802_pantroglodytes GACCCCTCGGC---------CTCCCTGCCACTGCCCGACAGACACTCAGG - * * ** * * - -ENSMUST00000091291_musmusculus GCTGGGGGCCGGGAGGGA---GGGTCCTCA----CTGAGCATCAAACGGA -ENSCAFT00000026349_canisfamiliaris -------CCCCAGAAGGG-----GCTC------------CCTC------- -ENSMUST00000005671_homosapiens ACACAAGGCTGAGAATGGCCCGGGCCCTGGCGTGCTCGTTCTCCGCGCCA -ENSRNOT00000019267_rattusnorvegicus ACACAAGGCTGAGAACGG------CCCTGGCGTGCTGGTTCTCCGTGCCA -ENSPTRT00000013802_pantroglodytes ACACAAGGCCGAGAACGGCCCCGGCCCTGGGGTGCTGGTCCTCCGCGCCA - * ** * * ** - -ENSMUST00000091291_musmusculus CCTATGATGA-ACACATCCCCTATACCCACATGAATGGGGGCAAGAAGAA -ENSCAFT00000026349_canisfamiliaris -----------AGACTG-C---ATGCCC-CA-AAATGGGGGTC------- -ENSMUST00000005671_homosapiens GTTTTGATGAGAGACAG-CCTTACGCTCACATGAACGGGGGACGCGCCAA -ENSRNOT00000019267_rattusnorvegicus GTTTTGATGAGAGACAG-CCTTACGCTCACATGAATGGGGGACGCGCCAA -ENSPTRT00000013802_pantroglodytes GCTTCGACGAGAGACAG-CCGTACGCACACATGAACGGGGGCCGCAAGAA - * ** * * * * ** ** ***** - -ENSMUST00000091291_musmusculus CGGACGTGTCCTTACCCTGCCAAGGTCAAACCCTTCCTAA -ENSCAFT00000026349_canisfamiliaris ----------C-----------AGGGC--------ACTGA -ENSMUST00000005671_homosapiens CGAGAGGGCCTTGCCTCTGCCCCAGTCCTCGACCTGCTGA -ENSRNOT00000019267_rattusnorvegicus CGAGAGGGCCTTGCCTCTGCCCCAGTCCTCAA---CCTGC -ENSPTRT00000013802_pantroglodytes CGAGCGGGCCTTGCCGCTGCCCCAGTCTTCGACCTGCTGA - * * ** - - - diff -r ae69d14b6fbf -r e3507be607eb test-data/output3.fasta_aln --- a/test-data/output3.fasta_aln Thu Jan 14 12:14:52 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,430 +0,0 @@ ->ENSMUST00000091291_musmusculus -ATGGG-CTTCGGGAGAGGATGTGAGACGACGG-----CTGTGCCATTGCT -GGTGGCCGTGGCCGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTG -GAGAGG--TGTG-CCCTGGTATGGACATCCGGAACAACC-TGACCAGGCT -ACATGAGCTGGAGAACTGCTCAGTCATTGAGGGCCATCTGCAGATCCTCC -TGATGTTCAAGACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAA -CTCATCATGATCACAGATTACCTGCTTCTCTTCCGTGTCTATGGTCTGGA -AAGTCTGAAAGACCTCTTCCCAAATCTCACAGTCATCCGAGGCTCCCGTC -TCTTCTTCAACTATGCCCTGGTTATCTTCGAGATGGTCCACCTGAAGGAG -CTGGGGCTTTATAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGA -GAAGAATAATGAGCTCTGCTACCTGGCCACTATCGACTGGTCCCGTATCC -TGGATTCTGTGGAGGACAACTACATTGTACTGAACAAAGATGACAACGAG -GAATGTGGGGATGTCTGTCCAGGCACCGCCAAGGGCA-AGACCAA--CTG -TCCTGCCACTGTCATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACA -GTCATTGTCAGAAAGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACA -GCTGAAGGCCTGTGCTGCCACAAAGAGTGCCTGGGCAACTGTTCGGAACC -TGATGACCCCACCAAGTGTGTGGCCTGTCGCAACTTCTATCTGGATGGTC -AGTGTGTGGAGACCTGCCCGCCACCCTACTATCACTTCCAGGACTGGCGC -TGTGTGAACTTCAGCTTCTG--CCAAGACCTTCA-CTTCAAATGCAGGAA -CTCTCGGAAGCCTGGCTGCCACCAATACGTCATTCACAACAATAAGTGCA -TCCCCGAGTGCCCGTCTGGCTATACCATGAATTCCAGC---AACTTGATG -TGCACCCCATGTCTGGGACCCTGCCCTAAGGTCTGCCAA-ATCCTC-GAA -GGTG-AGAAGACCATTGATTCTGTGACATCTGCCCAGGAGCTCCGAGGCT -GCACTGTGATCAACGGTAGCCTGATCATCAACATCCGAGGGGGCAACAAC -CTGGCAGCTGAGCTGGAGGCTAACCTTGGCCTCATTGAAGAAATTTCGGG -ATTTCTAAAGATCCGCCGCTCCTATGCTCTGGTATCACTTTCTTTCTTCA -GGAAGCTACATCTGATTCGAGGAGAGACCTTGGAAATTGGGAACTATTCT -TTTTATGCCTTGGACAACCAGAACCTGAGGCAACTCTGGGACTGGAG-CA -AACACAACCTCACCATCACTCAGGGCAAGCTCTTCTTCCATTACAACCCG -AAACTCTGCTTGTCTGAAATTCACAAGATGGAAGAAGTCTCCGGAACTAA -GGGCCGTCAGGAGAGGAACGACATTGCCCTGAAGACCAATGGGGACCAGG -CATCGTGTGAAAATGAATTGCTTAAATTTTCTTTCATTCGGACATCTTTT -GACAAGATCCTGTTGAGGTGGGAACCCTACTGGCCCCCCGACTTCCGAGA -TCTCCTGGGATTCATGTTGTTCTACAAAGAGGCCCCTTATCAGAATGTGA -CAGAGTTTGATGGGCAGGATGCTTGTGGCTCCAACAGCTGGACTGTGGTG -GATATTGACCCGCCCCAGAGGTCCAACGACCCCAAGTCTCAGACCCCAAG -CCACCCTGGGTGGCTGAT-GCGGGGCCTCAAACCCTGGACCCAATACGCC -ATCTTTGTGAAGACCTTGG---TTACCTTCTCTGATGAACGGC-GGACCT -ATGGAGCCAAAAGTGATATCATCTATGTGCAAACAGATGCCACTAATCCT -TCTGTCCCCCTGGATCCCATATCAGTTTCTAATTCCTCATCTCAGATTAT -CTTAAAGTGGAAGCCCCCCTCTGACCCCAATGGCAACATCACACACTACC -TGGTGTACTGGGAGAGGCAAGCAGAGGACAGCGAGCTGTTTGAGCTGGAT -TATTGTCTCAAAGGGCTGA-AGCTCCCTTCACGGACCTGGTC---CCCAC -CCTTTGAGTCTGATGAT-T--CTCAGAAGCACAA-TCAGA-GT-GAGTA- -TGACGACTCGGCCAGTGAGTGC-TGCTCATGCCC-TAAGACTGACTCTCA -GATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCTTCGAGGATT -ACCTGCACAACGTGGTTTTTGTCCCCAGGCCATCCCGAAAGCGAAGATCC -CTTGAAGAGGTGGGGAATGTGACA---GCCACCACACTCA-CACTTCCAG -ATTTCCCCAACGT-CTCCTCTACCATTGTGCCC-ACAAGTCAG-G-AGGA -GCACAGGCCATTTGAGA---AAGTGGTGAACAAGGAGTCACTTGTCATCT -CTGGCCTGAGACACTTCACTGGGTACCGCATTGAGCTGCAGGCATGCAAT -CAAGATTCCCCAGAT-GAGAGGTGCAGTGTGGCTGCCTACGTCAGTGCCC -GGACCATGCCTGAAGCTAAGGCAGATGACATCGTTGGCCCTGTGACTCAT -GAA---ATCTTTGAGAACAATGTTGTACACTTAATGTGGCAAGAGCCAAA -GGAACCTAATGGTCTGATTGTGCTATATGAAGTGAGCTATCGCCGATATG -GTGATGAGGAG-CTGCACCTCTGTGTCTCCCGGAAGCATTTTGCCCTGGA -GCGGGGCTGCAGGCTGCGAGGGCTCTCCCCAGGAAACTACAGTGTTCGAG -TCCGGGCTACCTCTCTGGCAGGAAATGGCTCCTGGACAGAACCCACCTAT -TTTTATGTGACTGAT-TATTTAGATGTCCCATCAAA-TATTGCCAAAATT -ATCATTGGACCCCTCATCTTTGTCTTCCTCTTCAGTGTTG--TGATTGGA --AGTAT---TTATCTATTTCTGAGAAAGAGG-----CAGCCGGATGGGCC -AATGGGACCACTGTATGCATCTTCAAACCCTGAGTACCT-CAGTGCCAGT -GATGTGTTTCCATCTTCTGTGTACGTGCCGGACGAGTGGGAGGTGCCTCG -AGAGAAGATCACCCTTCTTCGAGAGCTGGGGCAGGGATCCTTTGGTATGG -TGTATGAAGGCAATGC-CAAGGATA--TCATCAAGGGTGAGGCAGAGACC -CGTGTTGCGGTTAAGACTGTCAATGAGTCAGCCAGTCTTCGAGAACGGAT -CGAGTTCCTCAATGAGGCATCAGTCATGAAGGGATTCACCTGCCATCATG -TGGTCCGCCTTCTTGGGGTGGTATCCAAAGGACAGCCAACGCTGGTAGTG -ATGGAATTGATGGCTCATGGAGACCTGAAAAGTCACCTCCGTTCTCTGAG -GCCAGATGCTGA---GAATAACCCAGGCCGCCCTCCCCCTACCTTGCAAG -AAATGATTCAGATGACAGCAGAAATTGCTGATGGCATGGCATACTTGAAC -GCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGAAACTGCATGGTTGC -CCATGATTTTACTGTCAAAATTGGAGACTTTGGAATGACAAGGGACATCT -ACGAGACAGATTACTATCGGAAAGGGGGCAAGGGACTGCTTCCTGTGAGG -TGGATGTCACCTGAGTCCCTGAAGGATGGAGTCTTTACTGCTTCTTCTGA -TATGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACTAGCCTGGCTGAGC -AACCTTATCAAGGCCTGTCTAATGAACAGGTGTTGAAGTTTGTCATGGAT -GGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTCACTGACCT -GATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAGGCCAACCTTCCTGG -AAATCGTCAACCTGCTCAAGGATGACCTCCACCCCAGCTTTCCAGAAGTT -TCCTTCTTCTACAGCGAGGAGAACAAGGCTCCTGAGAGTGAGGAGCTGGA -----GAT------------GGAGTTTGAAGACATGGAGAATGTCCCGTTG -GATCGTTC----------------CTCTCACTGTCAGAGAGAA---GAG- -GCTGGGGGCCGGGAGGGA---GGGTCCTCA----CTGAGCATCAAACGGA -CCTATGATGA-ACACATCCCCTATACCCACATGAATGGGGGCAAGAAGAA -CGGACGTGTCCTTACCCTGCCAAGGTCAAACCCTTCCTAA ->ENSCAFT00000026349_canisfamiliaris -ATGGCAGT---GCCCAGT--CTGTGCCCATGG-GTCGC-ATGC--CTGCT -GGTGATCCTCCTCTCCTTGGGATTTGGCCTGGAC------------ACAC -TAGAGG--TGTG-CCCCAGCCTGGACATCCGCTCAGAGGTGGCGG-AGCT -GCGCCGGCTGGAGAACTGCAGCGTGGTGGAGGGCCATCTGCAGATCCTGC -TCATGTTCACGGCCACGGGCGAGGACTTCCGCGGCCTCAGCTTCCCGCGC -CTCACTCAGGTCACTGACTACCTGCTGCTCTTCCGCGTGTATGGCCTGGA -GAGCCTGCGGGACCTCTTCCCCAACCTCGCGGTCGTGCGTGGCGCCCGCC -TCTTCCTGGGTTATGCGCTGGTGGTCTACGAGATGCCGCACCTGCGGGAC -GTGGGGCTGCCGGCGCTGGGGGCCGTGCTGCGTGGGGCCGTGCGGGTGGA -GAAGAACCAGGAGCTCTGTCATCTCTCCACCATCGACTGGGGGCTGCTGC -AGCCCTCGCCCAGCGCCAACCACATCGTGGGCAACAA-GCTGCGT--GAG -GAGTGTGCCGACGTGTGCCCTGGTGTGCTGGGTGCCACCGGCCAGCCCTG -CGCCAGGACCACCTTCAGTGGGCACACCGACTACAGATGCTGGACCTCCA -GCCACTGCCAGAGAGTGTGTCCCTGCCCCCATGGG---CTGGCCTGCACA -GCTGGGGGTGAGTGCTGCCACACTGAATGCCTGGGGGGCTGCAGCCGGCC -GGAAGACCCCCGCGCCTGCGTCGCCTGTCGCCACCTCTACTTCCAGGGTG -CCTGCCACCGGGCCTGCCCTCCAGGCACCTACCAGCACGAGTCCTGGCGC -TGTGTCACGGCAGAGCGCTGTGCCAGCCTGCG---CTCTGTGCCCGGCCG -CAC---------------CTCCATCTTTGGCATCCACGAGGGCAGCTGCC -TGGCCCAGTGCCCTCCGGGCTTCACCCGCAACGGCAGC---AGCATGTTC -TGCCACAAGTGTGAGGGGCTGTGCCCCAAAGAGTGCA---AGGT------ -GGGTACCAAGACCATCGACTCCACGCAGGCGGCACAGGACCTGGCGGGCT -GCACCCACGTGGAGGGGAGCCTCATCATCAACCTCCGCCAGGGCTACAAC -CTAGAGCTGGAGCTGCAACAGAGCCTGGGGCTGATAGAGACCATCACTGG -CTTCCTCAAGATCAAGCACTCCTTTGCCCTCGTGTCCCTGGGCTTTTTCA -AGAACCTCAAACTCATCCGAGGGGACGCCATGGTGGATGGGAACTACACC -CTGTATGTGCTGGACAACCAGAACCTACAGCAGCTGGGGGCCTGGGTGGC -TGCGG-GGCTCACCATTCCCGTGGGCAAGATATACTTCGCTTTCAACCCT -CGCCTCTGCTTGGAGCACATCTACCGCCTGGAAGAGGTGACCGGCACGCG -GGGACGGCAAAACAAGGCTGAGATCAACCCCCGCACCAACGGAGACCGCG -CCGCCTGCCAAACTCGCACCCTGCGCTTCGTGTCCAACGTGACGCAAGCT -GACAGCATCTTGCTGCGCTGGGAGCGCTACGAGCCGCTGGAGGCTCGGGA -CCTGCTCAGCTTCATCGTGTACTACAAGGAGTCCCCATTCCAGAATGCCA -CAGAGCACACAGGTCCAGATGCCTGTGGAACCCAGAGCTGGAACCTGCTG -GATGTGGAGCTGCCCTTAAG---CCGCACCC--------AAGAACC---- ------CGGGGT-AACTCTAGCA-CCCCTCAAGCCCTGGACACAATATGCA -GTGTTTGTACGGGCCATCACACTGACCACTG-CTGAGGACAGCCCCCACC -AAGGAGCCCAGAGCCCCATCGTCTACCTCCGAACCCTGCCTGCGGCGCCC -ACTGTGCCCCAGGACGTCATCTCCACGTCCAATTCCTCGTCCCACCTGCT -CGTGCGCTGGAAGCCACCGATTCAGCGCAACGGGAACATCACCTACTACC -TGGTGCTGTGGCAGCGTCTGGCGGAGGACGGCGACCTCTATCTCAACGAC -TACTGCCACCGCGGCCTGCGGCTGCCCACCAGCAACAACGAC---CCGC- -GCTTCGACCGCGAGGA-----CGGTGAACTCGAAG-CCGAGATGGAGCC- --GG-GCTGC----TGCCCTTGCCAGCACCCACCGCCTGGGCAG--GTCCT -GCCGCCGCTGGAGGCGCAAGAGGCCTCGTTCCAGAAGAAGTTCGAAAACT -TCCTGCACAACGCCATCACCATCCCCAAGTCCCCCTGGAAGGTGACGTCC -GTCA-ATAAGAGCCCTCAAAGA-------CATGCGG-GGAGGCACCGCCG -GGC-GGCCGGGGCGCTCC---GGCTTGGGGGC--AACAGCTCG-----GA -TTTCGAGATCCAGGAGGACAAAGTGC---CCCGGGAGCGAGCAGTGTTGA -GTGGTCTGCGCCACTTTACGGAATATCGTATCGACATCCACGCCTGCAAC -CACGCGGCT-CACACCGTGGGCTGCAGCGCGGCCACGTTCGTCTTCGCGC -GCACCATGCCGCACAGAGAAGCTGATGGCATCCCAGGGAAGGTGGCCTGG -GAGGCAGCCAGCAAAAGC---AGTGTCCTCCTGCGCTGGCTGGAGCCACC -TGACCCCAACGGACTCATCCTCAAGTATGAAATCAAGTACCGCCGCTTGG -GAGAGGAGGCCACAGT-GCTATGTGTGTCCCGCCTACGATATGCCAAATT -TGGGGGTGTCCAGCTGGCCCTGCTGCCCCCTGGAAACTACTCCGCCAGAG -TTCGGGCAACCTCGCTGGCTGGCAACGGCTCCTGGACAGAAAGTATCGCT -TTCTACGTCCCAGGCCCA----GAGG----AGGAAGACTCCGGGGGGCTG -CACGTCCTTCTCACTG---TCACCCCCGTGGGGCTCAT------GCTGTT -CATCATTCTTGCCGCCCTCGGTTTCTTC------TACGGCAGGAAGAG-A -AACAG-CACCCTCTATGCCTCAGTGAATCCGGAGTACTT-CAGCGCCTCT -GAT---------------ATGTACATCCCTGATGAGTGGGAGGTGCCTCG -GGAGCAGATCTCCATAATCCGAGAGCTGGGCCAGGGCTCCTTTGGGATGG -TATATGAAGGCCTGGCACAAGGACTAGAGGCTGGAGAGGAGTCC-ACACC -C--GTGGCCCTGAAGACAGTGAATGAGTTGGCCAGCCCACGAGAACGCAT -TGAGTTCCTCAAGGAAGCTTCTGTCATGAAGGCATTCAAGTGTCACCATG -TGGTACGTCTCCTGGGTGTTGTGTCTCAAGGCCAGCCAACTCTGGTCATC -ATGGAGTTAATGACTCGTGGGGACCTCAAGAGCCATCTTCGATCTCTGCG -GCCTGAGGCAGA---GAACAACCCTGGGCTCCCACGGCCAGCACTGGGAG -ATATGATCCAGATGGCTGGTGAGATTGCAGATGGCATGGCTTACCTCGCT -GCCAACAAGTTTGTGCATCGAGACCTGGCAGCCAGAAACTGCATGGTGTC -CCAGGACTTCACCGTCAAGATTGGGGACTTCGGGATGACTCGAGACGTGT -ACGAGACAGACTATTACCGCAAGGGCGGGAAAGGGCTGCTGCCCGTGCGC -TGGATGGCCCCCGAGTCCCTCAAAGATGGAATCTTCACCACACATTCGGA -TGTTTGGTCCTTCGGGGTGGTGCTCTGGGAGATCGTGACCCTAGCTGAAC -AGCCCTACCAGGGTTTATCCAACGAGCAGGTGCTCAAGTTTGTCATGGAT -GGTGGGGTCCTGGAGGAGCTGGAGAGCTGTCCCCTTCAGCTGCAAGAACT -GATGAGCCGCTGCTGGCAGCAGAACCCACGCCTGCGGCCCACCTTCACCC -ACATCCTGGACAGCATTCGGGGGGAACTGCGGCCCTCTTTCCGCCTCTTT -TCCTTCTATTACAGCCCAGAGTG-------------CCAGGGGAGCCAGG -GGGCCCT------------GCTGCCTAATGCC-----------------A -AACCCAA-------------CTCCCTACCA-----------A-------- --------CCCCAGAAGGG-----GCTC------------CCTC------- ------------AGACTG-C---ATGCCC-CA-AAATGGGGGTC------- -----------C-----------AGGGC--------ACTGA ->ENSMUST00000005671_homosapiens -ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT -CGTGTTTCTCTCCGCCGCGCTC-TCTCTCTGGCCGA---C-----GAGTG -GAGAAATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGC-AGCT -GAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGC -TCATCTCCAAGG------CCGAGGACTACCGAAGCTACCGCTTCCCCAAG -CTCACCGTCATCACTGAGTACTTGCTGCTCTTCCGAGTCGCTGGCCTCGA -GAGCCTGGGAGACCTCTTCCCCAACCTCACAGTCATCCGTGGCTGGAAAC -TCTTCTACAACTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGAT -ATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA -GAAGAACGCCGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCT -TGGATGCGGTGTCCAATAACTACATTGTGGGGAACAA-GCCCCCG--AAG -GAATGTGGGGACCTGTGTCCAGGGACATTGGAGGAGA-AGCCCAT--GTG -TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA -ATCGCTGCCAGAAAATGTGCCCAAGTGTGTGCGGGAAGCGAGCCTGCACC -GAGAACAACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACC -GGACGACAACACAACCTGCGTGGCCTGCAGACACTACTACTACAAAGGCG -TGTGTGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGC -TGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGA -CTC---------------GGATGGCTTCGTTATCCACGACGATGAGTGCA -TGCAGGAGTGTCCCTCAGGCTTCATCCGCAACAGCACCCAGAGCATGTAC -TGTATCCCCTGCGAAGGCCCCTGCCCCAAAGTCTGCGGCGATGAAGAGAA -GAAAACGAAAACCATCGATTCGGTGACTTCTGCTCAAATGCTCCAAGGAT -GCACCATCCTGAAGGGCAATCTGCTTATTAACATCCGGAGAGGCAATAAC -ATTGCCTCGGAGTTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACCGG -CTACGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTGA -AGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTGGAAGGGAACTACTCC -TTCTATGTCCTAGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAA-CC -ACCGGAACCTGACCGTCAGGTCCGGAAAGATGTACTTTGCTTTCAATCCC -AAGCTGTGTGTCTCCGAAATTTACCGCATGGAGGAAGTGACCGGAACCAA -GGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAG -CTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTCCACCACGACCTGGAAG -AACCGAATCATCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGA -TCTCATCAGCTTCACAGTTTACTACAAGGAGGCACCATTTAAAAACGTTA -CGGAATATGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTG -GATGTAGACCTGCCTCCGAA---CAAGGAGG--------GCGAGCC---- ------TGGCAT-TTTACT-GCATGGGCTGAAGCCCTGGACCCAGTATGCT -GTCTATGTCAAGGCTGTGACCCTCACCATGG-TGGAAAACGACCATATCC -GTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAATGCTTCAGTCCCT -TCCATTCCCCTAGATGTCCTCTCAGCATCAAACTCTTCCTCTCAGCTGAT -TGTGAAGTGGAATCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACA -TTGTGAGGTGGCAGCGGCAGCCCCAGGATGGTTACCTGTACCGGCACAAC -TACTGCTCCAAAGA-CAA--AATACCCATCAGAAAGTACGCCGATGGTA- -CCATCGACGTGGAGGAGGTGACGGAAAATCCCAAGACAGAAGT-GTGTGG -TGGTGATAA---AGGGCCATGC-TGCGCTTGCCC-TAAAACTGAAGCTGA -GAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATT -TCCTTCACAATTCCATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGAC -GTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCAC -GGT-AGCTGACAC-CTACAATATCACAGACCCGGAGGAGTTCGAGACAGA -GTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATCT -CCAACCTCCGGCCTTTCACTCTGTACCGCATCGATATCCACAGCTGCAAC -CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTCGTCTTTGCGA -GAACCATGCCAGCAGAAGGAGCAGATGATATCCCTGGTCCGGTGACCTGG -GAGCCAAGACCCGAAAAC---TCCATCTTTTTAAAGTGGCCAGAACCCGA -GAACCCCAACGGATTGATCCTAATGTATGAAATTAAATACGGGTCGCAA- ---GTCGAGGAT-CAGCGGGAATGTGTGTCCAGACAGGAGTACAGGAAGTA -CGGAGGGGCCAAACTCAACCGTCTAAACCCAGGGAACTATACAGCCCGGA -TTCAGGCTACCTCCCTCTCTGGGAATGGGTCATGGACAGATCCTGTGTTC -TTCTATGTCCCCGCC-AA----AACGACGTATGAGAACTTCATGCATCTG -ATCATTGCTCTGCCGG---TTGCCATCCTGCTGATCGTTGGGGGGCTGGT -TATCATGCTGTATGTCTTCCATAGAAAGAGAAATAACAGCAGGTTGGG-C -AATGG-AGTGCTGTATGCTTCTGTGAACCCCGAGTATTT-CAGCGCAGCT -GAT---------------GTGTACGTGCCTGATGAATGGGAGGTAGCTCG -AGAGAAGATCACCATGAACCGGGAGCTCGGACAAGGGTCCTTTGGGATGG -TCTATGAAGGAGTGGC-CAAGGGTG--TGGTCAAGGATGAACCCGAAACC -AGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGTATGCGTGAAAGAAT -CGAGTTTCTCAACGAGGCCTCGGTGATGAAGGAGTTCAATTGTCACCATG -TGGTCCGGTTGCTGGGTGTGGTATCCCAAGGCCAGCCCACCCTGGTCATC -ATGGAACTAATGACACGCGGTGATCTCAAAAGTTATCTCCGGTCTCTGAG -GCCAGAAGTGGAGCAGAATAATCTAGTCCTCATTCCTCCGAGCTTAAGCA -AGATGATCCAGATGGCTGGAGAGATTGCAGATGGCATGGCCTACCTCAAT -GCCAACAAGTTCGTCCACAGAGACCTTGCTGCTAGGAACTGCATGGTAGC -CGAAGATTTCACAGTCAAAATTGGAGATTTCGGTATGACACGAGACATCT -ACGAGACGGACTACTACCGGAAAGGCGGGAAGGGGTTGCTGCCTGTGCGC -TGGATGTCTCCCGAGTCCCTCAAGGATGGTGTCTTCACTACTCATTCTGA -TGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACGCTGGCTGAGC -AGCCCTACCAGGGCTTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAG -GGTGGCCTTCTGGACAAGCCGGACAACTGCCCTGATATGCTGTTTGAACT -TATGCGCATGTGCTGGCAGTATAACCCCAAGATGCGGCCCTCCTTCCTGG -AGATCATCGGCAGCATCAAGGATGAGATGGAGCCCAGCTTCCAGGAGGTC -TCCTTCTACTACAGCGAGGAGAACAAGCCTCCCGAGCCAGAGGAGCTGGA -----GAT------------GGAGCCTGAGAACATGGAGAGCGTCCCACTG -GACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGG -ACACAAGGCTGAGAATGGCCCGGGCCCTGGCGTGCTCGTTCTCCGCGCCA -GTTTTGATGAGAGACAG-CCTTACGCTCACATGAACGGGGGACGCGCCAA -CGAGAGGGCCTTGCCTCTGCCCCAGTCCTCGACCTGCTGA ->ENSRNOT00000019267_rattusnorvegicus -ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT -CGTGTTTCTCTCCGCCGCGCTC-TCGCTCTGGCCGA---C-----GAGTG -GAGAAATTTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGC-AGCT -GAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGC -TCATCTCCAAGG------CCGAGGACTACCGAAGCTACCGCTTCCCCAAG -CTCACGGTCATCACCGAGTACTTGCTGCTGTTTCGAGTGGCCGGCCTCGA -GAGCCTGGGAGACCTCTTCCCGAACCTCACAGTCATCCGTGGCTGGAAAC -TCTTCTACAATTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGAT -ATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA -GAAAAACGCTGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCT -TGGATGCGGTGTCCAATAACTACATTGTGGGGAACAA-GCCCCCA--AAG -GAATGTGGGGACCTGTGTCCAGGGACCTTGGAGGAGA-AGCCCAT--GTG -TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA -ATCGCTGCCAGAAAATGTGCCCAAGTGTGTGTGGGAAGCGAGCCTGCACC -GAGAACAATGAGTGCTGCCACCCGGAGTGCCTAGGCAGCTGCCACACACC -GGACGACAACACAACCTGCGTGGCCTGCCGACACTACTACTACAAAGGCG -TGTGCGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGC -TGTGTGGACCGGGATTTCTGCGCCAACATCCCCAACGCCGAGAGCAGTGA -CTC---------------AGATGGCTTCGTCATCCACGATGGCGAGTGCA -TGCAGGAGTGTCCATCAGGCTTCATCCGCAACAGCACCCAGAGCATGTAC -TGTATCCCCTGTGAAGGCCCCTGCCCCAAGGTCTGCGGCGATGAAGAAAA -GAAAACGAAAACCATCGATTCTGTGACGTCTGCCCAGATGCTCCAAGGGT -GCACCATTTTGAAGGGCAATCTGCTTATTAACATCCGGCGAGGCAATAAC -ATTGCCTCGGAATTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACTGG -CTACGTGAAGATCCGCCATTCCCATGCCTTGGTCTCCTTGTCCTTCCTGA -AGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAACTACTCC -TTCTATGTCCTGGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAA-CC -ACCGGAACCTGACCGTCAGGTCAGGGAAAATGTACTTCGCTTTCAATCCC -AAGCTGTGTGTCTCTGAAATTTACCGGATGGAGGAGGTGACAGGAACAAA -GGGACGGCAGAGCAAAGGAGACATAAACACCAGGAACAACGGAGAGCGAG -CTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTCCACCACCACCTGGAAG -AACCGCATCATCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGA -TCTCATCAGTTTCACAGTCTACTACAAGGAGGCACCCTTTAAAAACGTCA -CGGAATACGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTG -GACGTGGACCTGCCTCCGAA---CAAGGAGG--------GGGAGCC---- ------TGGCAT-TTTGCT-GCATGGGCTGAAGCCCTGGACCCAGTATGCA -GTCTATGTCAAGGCTGTGACCCTCACCATGG-TGGAAAACGACCACATCC -GTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAACGCTTCAGTTCCT -TCCATTCCTCTAGATGTCCTCTCGGCATCAAACTCCTCCTCTCAGCTGAT -CGTGAAGTGGAACCCCCCAACTCTGCCCAATGGTAACTTGAGTTACTACA -TTGTGAGGTGGCAGCGGCAGCCGCAGGATGGCTATCTGTTCCGGCACAAC -TACTGCTCCAAAGA-CAA--AATACCCATCAGAAAGTACGCCGATGGTA- -CCATCGATGTGGAGGAGGTGACAGAAAATCCCAAGACAGAAGT-GTGCGG -TGGTGATAA---AGGGCCGTGC-TGTGCCTGTCC-TAAAACCGAAGCTGA -GAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATT -TCCTTCACAACTCCATCTTTGTGCCCAGACCTGAGAGGAGGCGGAGAGAT -GTCCTGCAGGTGGCTAACACCACCATGTCCAGCCGAAGCAGGAACACCAC -GGT-AGCTGACAC-CTACAATATCACAGACCCGGAAGAGTTCGAGACAGA -ATACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATTT -CCAACCTCCGGCCTTTCACTCTGTACCGTATCGATATCCACAGCTGCAAC -CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTTGTCTTTGCAA -GAACCATGCCAGCAGAAGGAGCAGATGACATTCCTGGCCCAGTGACCTGG -GAGCCAAGACCTGAAAAC---TCCATCTTTTTAAAGTGGCCAGAACCCGA -GAACCCCAACGGATTGATTCTAATGTATGAAATAAAATACGGATCGCAA- ---GTCGAGGAT-CAGCGGGAATGTGTGTCCAGACAGGAGTACAGGAAGTA -TGGAGGGGCCAAACTTAACCGTCTAAACCCAGGGAACTATACGGCCCGGA -TTCAGGCTACCTCCCTCTCTGGGAATGGGTCGTGGACAGATCCTGTGTTC -TTCTATGTCCCAGCC-AA----AACAACGTATGAGAATTTCATGCATCTG -ATCATTGCTCTGCCGG---TTGCCATCCTGCTGATTGTGGGGGGCCTGGT -AATCATGCTGTATGTCTTCCATAGAAAGAGG-------G-TGTCTGGGCC -AGCAG-AAGGCAGTAG----TTGGAAA---GGGCCATTTCCATCCTGTCT -GTT----------C-CTAGTGTACGTGCCTGATGAATGGGAGGTAGCTCG -GGAGAAGATCACCATGAACCGGGAGCTCGGACAAGGGTCCTTCGGGATGG -TCTATGAAGGAGTGGC-CAAGGGCG--TGGTCAAGGACGAGCCTGAAACC -AGAGTGGCCATCAAGACAGTGAATGAGGCTGCAAGTATGCGTGAGAGAAT -TGAGTTTCTCAACGAGGCCTCAGTGATGAAGGAGTTCAACTGTCACCATG -TGGTCCGGTTGCTGGGTGTAGTATCCCAAGGCCAGCCCACCCTGGTCATC -ATGGAACTAATGACACGTGGCGATCTCAAAAGTTATCTCCGGTCTCTAAG -GCCAGAGGTGGA---GAATAATCTAGTCCTGATTCCTCCGAGCTTAAGCA -AGATGATCCAGATGGCTGGAGAGATTGCAGATGGCATGGCCTACCTCAAT -GCCAACAAGTTCGTCCACAGAGACCTGGCTGCTCGGAACTGCATGGTAGC -TGAAGATTTCACAGTCAAAATTGGAGATTTTGGTATGACACGAGACATCT -ACGAGACGGACTACTACCGGAAAGGCGGGAAGGGCTTGCTGCCTGTGCGC -TGGATGTCTCCCGAGTCCCTCAAGGATGGCGTCTTCACCACTCATTCCGA -TGTCTGGTCCTTTGGGGTCGTCCTCTGGGAGATCGCCACTCTGGCTGAGC -AGCCGTACCAGGGCCTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAG -GGCGGCCTTCTGGACAAGCCGGATAACTGCCCCGATATGCTGTTTGAACT -TATGCGCATGTGCTGGCAGTACAACCCCAAGATGCGGCCCTCCTTCCTGG -AGATCATCGGAAGCATCAAGGATGAGATGGAGCCCAGTTTCCAGGAGGTC -TCCTTCTACTACAGCGAGGAGAACAAGCCTCCAGAGCCGGAGGAGCTGGA -----GATGGAGCTGGAGCTGGAGCCCGAGAACATGGAGAGCGTCCCGCTG -GACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGG -ACACAAGGCTGAGAACGG------CCCTGGCGTGCTGGTTCTCCGTGCCA -GTTTTGATGAGAGACAG-CCTTACGCTCACATGAATGGGGGACGCGCCAA -CGAGAGGGCCTTGCCTCTGCCCCAGTCCTCAA---CCTGC ->ENSPTRT00000013802_pantroglodytes -ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT -CCTGTTTCTCTCCGCCGCGCTC-TCGCTCTGGCCGA---C-----GAGTG -GAGAAATCTGCGGGCCAGGCATCGACATCCGCAACGACTATCAGC-AGCT -GAAGCGCCTGGAGAACTGCACGGTGATCGAGGGCTACCTCCACATCCTGC -TCATCTCCAAGG------CCGAGGACTACCGCAGCTACCGCTTCCCCAAG -CTCACGGTCATTACCGAGTACTTGCTGCTGTTCCGAGTGGCTGGCCTCGA -GAGCCTCGGAGACCTCTTCCCCAACCTCACGGTCATCCGCGGCTGGAAAC -TCTTCTACAACTACGCCCTGGTCATCTTCGAGATGACCAATCTCAAGGAT -ATTGGGCTTTACAACCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA -GAAAAATGCTGACCTCTGTTACCTCTCCACTGTGGACTGGTCCCTGATCC -TGGATGCGGTGTCCAATAACTACATTGTGGGGAATAA-GCCCCCA--AAG -GAATGTGGGGACCTGTGTCCAGGGACCATGGAGGAGA-AGCCGAT--GTG -TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA -ACCGCTGCCAGAAAATGTGCCCGAGCACGTGTGGGAAGCGGGCGTGCACC -GAGAACAACGAGTGCTGCCACCCCGAGTGCCTGGGCAGCTGCAGCGCGCC -TGACAACGACACGGCCTGTGTAGCTTGCCGCCACTACTACTATGCCGGTG -TCTGTGTGCCTGCCTGCCCGCCCAACACCTACAGGTTTGAGGGCTGGCGC -TGTGTGGACCGTGACTTCTGCGCCAACATCCTCAGCGCCGAGAGCAGCGA -CTC---------------CGAGGGGTTTGTGATCCACGACGGCGAGTGCA -TGCAGGAGTGCCCCTCGGGCTTCATCCGCAACGGCAGCCAGAGCATGTAC -TGCATCCCTTGTGAAGGTCCTTGCCCGAAGGTCTGTG---AGGAAGAAAA -GAAAACAAAGACCATTGATTCTGTTACTTCTGCTCAGATGCTCCAAGGAT -GCACCATCTTCAAGGGCAATTTGCTCATTAACATCCGACGGGGGAATAAC -ATTGCTTCAGAGCTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACGGG -CTACGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTAA -AAAACCTTCGCCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAATTACTCC -TTCTACGTCCTCGACAACCAGAACTTGCAGCAACTATGGGACTGGGA-CC -ACCGCAACCTGACCATCAAAGCAGGGAAAATGTACTTTGCTTTCAATCCC -AAATTATGTGTTTCCGAAATTTACCGCATGGAGGAAGTGACGGGGACTAA -AGGGCGCCAAAGCAAAGGGGACATAAACACCAGGAACAACGGGGAGAGAG -CCTCCTGTGAAAGTGACGTCCTGCATTTCACCTCCACCACCACGTCGAAG -AATCGCATCATCATAACCTGGCACCGGTACCGGCCCCCTGACTACAGGGA -TCTCATCAGCTTCACCGTTTACTACAAGGAAGCACCCTTTAAGAATGTCA -CGGAGTATGATGGGCAGGACGCCTGCGGCTCCAACAGCTGGAACATGGTG -GACGTGGACCTCCCGCCCAA---CAAGGACG--------TGGAGCC---- ------CGGCAT-CTTACT-ACATGGGCTGAAGCCCTGGACTCAGTACGCC -GTTTACGTCAAGGCTGTGACCCTCACCATGG-TGGAGAATGACCATATCC -GTGGGGCCAAGAGTGAGATCTTGTACATTCGCACCAATGCTTCAGTTCCT -TCCATTCCCTTGGACGTTCTTTCAGCATCGAACTCCTCTTCTCAGTTAAT -CGTGAAGTGGAACCCTCCCTCTCTGCCCAACGGCAACCTGAGTTACTACA -TTGTGCGCTGGCAGCGGCAGCCTCAGGACGGCTACCTTTACCGGCACAAT -TACTGCTCCAAAGA-CAA--AATCCCCATCAGGAAGTATGCCGACGGCA- -CCATCGACATTGAGGAGGTCACAGAGAACCCCAAGACTGAGGT-GTGTGG -TGGGGAGAA---AGGGCCTTGC-TGCGCCTGCCC-CAAAACTGAAGCCGA -GAAGCAGGCCGAGAAGGAGGAGGCTGAATACCGCAAAGTCTTTGAGAATT -TCCTGCACAACTCCATCTTCGTGCCCAGACCTGAAAGGAAGCGGAGAGAT -GTCATGCAAGTGGCCAACACCACCATGTCCAGCCGAAGCAGGAACACCAC -GGC-CGCAGACAC-CTACAACATCACCGACCCGGAAGAGCTGGAGACAGA -GTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGAACTGTGATTT -CTAACCTTCGGCCTTTCACATTGTACCGCATCGATATCCACAGCTGCAAC -CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTTGTCTTTGCAA -GGACTATGCCCGCAGAAGGAGCAGATGACATTCCTGGGCCAGTGACCTGG -GAGCCAAGGCCTGAAAAC---TCCATCTTTTTAAAGTGGCCGGAACCTGA -GAATCCCAATGGATTGATTCTAATGTATGAAATAAAATACGGATCACAA- ---GTTGAGGAT-CAGCGAGAATGTGTGTCCAGACAGGAATACAGGAAGTA -TGGAGGGGCCAAGCTAAACCGGCTAAACCCGGGGAACTACACAGCCCGGA -TTCAGGCCACATCTCTCTCTGGGAATGGGTCGTGGACAGATCCTGTGTTC -TTCTATGTCCAGGCC-AA----AACAGGATATGAAAACTTCATCCATCTG -ATCATCGCTCTGCCCG---TCGCTGTCCTGTTGATCGTGGGAGGGTTGGT -GATTATGCTGTACGTCTTCCATAGAAAGAGAAATAACAGCAGGCTGGG-G -AATGG-AGTGCTGTATGCCTCTGTGAACCCGGAGTACTT-CAGCGCTGCT -GAT---------------GTGTACGTTCCCGATGAGTGGGAGGTGGCTCG -GGAGAAGATCACCATGAGCCGGGAACTTGGGCAGGGGTCCTTTGGGATGG -TCTATGAAGGAGTTGC-CAAGGGTG--TGGTGAAAGATGAACCTGAAACC -AGAGTGGCCATTAAAACAGTGAACGAGGCCGCAAGCATGCGTGAAAGGAT -TGAGTTTCTCAACGAAGCTTCTGTGATGAAGGAGTTCAATTGTCACCATG -TGGTGCGATTGCTGGGTGTGGTGTCCCAAGGCCAGCCAACACTGGTCATC -ATGGAACTGATGACACGGGGCGATCTCAAAAGTTATCTCCGGTCTCTGAG -GCCAGAAATGGA---GAATAATCCAGTCCTAGCACCTCCAAGCCTGAGCA -AGATGATTCAGATGGCCGGAGAGATTGCAGACGGCATGGCATACCTCAAC -GCCAATAAGTTCGTCCACAGAGACCTTGCTGCCCGGAATTGCATGGTAGC -CGAAGATTTCACAGTCAAAATCGGAGATTTTGGTATGACGCGAGATATCT -ATGAGACAGACTATTACCGGAAAGGAGGGAAAGGGCTGCTGCCCGTGCGC -TGGATGTCTCCCGAGTCCCTCAAGGATGGAGTCTTCACCACTTACTCGGA -CGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACACTGGCCGAGC -AGCCCTACCAGGGCTTGTCCAACGAGCAAGTCCTTCGCTTCGTCATGGAG -GGCGGCCTTCTGGACAAGCCAGACAACTGTCCCGACATGCTGTTTGAACT -GATGCGCATGTGCTGGCAGTATAACCCCAAGATGAGGCCTTCCTTCCTGG -AGATCATCAGCAGCATCAAAGAGGAGATGGAGCCTGGCTTCCGGGAGGTC -TCCTTCTACTACAGCGAGGAGAACAAGCTGCCCGAGCCGGAGGAGCTGGA -----CCT------------GGAGCCAGAGAACATGGAGAGCGTCCCCCTG -GACCCCTCGGC---------CTCCCTGCCACTGCCCGACAGACACTCAGG -ACACAAGGCCGAGAACGGCCCCGGCCCTGGGGTGCTGGTCCTCCGCGCCA -GCTTCGACGAGAGACAG-CCGTACGCACACATGAACGGGGGCCGCAAGAA -CGAGCGGGCCTTGCCGCTGCCCCAGTCTTCGACCTGCTGA diff -r ae69d14b6fbf -r e3507be607eb test-data/output3.msf --- a/test-data/output3.msf Thu Jan 14 12:14:52 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,610 +0,0 @@ -PileUp - - - - MSF: 4240 Type: N Check: 72 .. - - Name: ENSMUST00000091291_musmusculus oo Len: 4240 Check: 4481 Weight: 1.000 - Name: ENSCAFT00000026349_canisfamiliaris oo Len: 4240 Check: 6017 Weight: 1.000 - Name: ENSMUST00000005671_homosapiens oo Len: 4240 Check: 1338 Weight: 1.000 - Name: ENSRNOT00000019267_rattusnorvegicus oo Len: 4240 Check: 6549 Weight: 1.000 - Name: ENSPTRT00000013802_pantroglodytes oo Len: 4240 Check: 1687 Weight: 1.000 - -// - - - -ENSMUST00000091291_musmusculus ATGGG.CTTC GGGAGAGGAT GTGAGACGAC GG.....CTG TGCCATTGCT -ENSCAFT00000026349_canisfamiliaris ATGGCAGT.. .GCCCAGT.. CTGTGCCCAT GG.GTCGC.A TGC..CTGCT -ENSMUST00000005671_homosapiens ATGAA.GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG..GGGCT -ENSRNOT00000019267_rattusnorvegicus ATGAA.GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG..GGGCT -ENSPTRT00000013802_pantroglodytes ATGAA.GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG..GGGCT - - -ENSMUST00000091291_musmusculus GGTGGCCGTG GCCGCGTTGC TGGTGGGCAC AGCCGGCCAC CTGTACCCTG -ENSCAFT00000026349_canisfamiliaris GGTGATCCTC CTCTCCTTGG GATTTGGCCT GGAC...... ......ACAC -ENSMUST00000005671_homosapiens CGTGTTTCTC TCCGCCGCGC TC.TCTCTCT GGCCGA...C .....GAGTG -ENSRNOT00000019267_rattusnorvegicus CGTGTTTCTC TCCGCCGCGC TC.TCGCTCT GGCCGA...C .....GAGTG -ENSPTRT00000013802_pantroglodytes CCTGTTTCTC TCCGCCGCGC TC.TCGCTCT GGCCGA...C .....GAGTG - - -ENSMUST00000091291_musmusculus GAGAGG..TG TG.CCCTGGT ATGGACATCC GGAACAACC. TGACCAGGCT -ENSCAFT00000026349_canisfamiliaris TAGAGG..TG TG.CCCCAGC CTGGACATCC GCTCAGAGGT GGCGG.AGCT -ENSMUST00000005671_homosapiens GAGAAATCTG TGGGCCCGGC ATTGACATCC GCAACGACTA TCAGC.AGCT -ENSRNOT00000019267_rattusnorvegicus GAGAAATTTG TGGGCCCGGC ATTGACATCC GCAACGACTA TCAGC.AGCT -ENSPTRT00000013802_pantroglodytes GAGAAATCTG CGGGCCAGGC ATCGACATCC GCAACGACTA TCAGC.AGCT - - -ENSMUST00000091291_musmusculus ACATGAGCTG GAGAACTGCT CAGTCATTGA GGGCCATCTG CAGATCCTCC -ENSCAFT00000026349_canisfamiliaris GCGCCGGCTG GAGAACTGCA GCGTGGTGGA GGGCCATCTG CAGATCCTGC -ENSMUST00000005671_homosapiens GAAGCGCCTG GAAAACTGCA CGGTGATCGA GGGCTTCCTC CACATCCTGC -ENSRNOT00000019267_rattusnorvegicus GAAGCGCCTG GAAAACTGCA CGGTGATCGA GGGCTTCCTC CACATCCTGC -ENSPTRT00000013802_pantroglodytes GAAGCGCCTG GAGAACTGCA CGGTGATCGA GGGCTACCTC CACATCCTGC - - -ENSMUST00000091291_musmusculus TGATGTTCAA GACCAGACCC GAAGATTTCC GAGACCTCAG TTTCCCCAAA -ENSCAFT00000026349_canisfamiliaris TCATGTTCAC GGCCACGGGC GAGGACTTCC GCGGCCTCAG CTTCCCGCGC -ENSMUST00000005671_homosapiens TCATCTCCAA GG......CC GAGGACTACC GAAGCTACCG CTTCCCCAAG -ENSRNOT00000019267_rattusnorvegicus TCATCTCCAA GG......CC GAGGACTACC GAAGCTACCG CTTCCCCAAG -ENSPTRT00000013802_pantroglodytes TCATCTCCAA GG......CC GAGGACTACC GCAGCTACCG CTTCCCCAAG - - -ENSMUST00000091291_musmusculus CTCATCATGA TCACAGATTA CCTGCTTCTC TTCCGTGTCT ATGGTCTGGA -ENSCAFT00000026349_canisfamiliaris CTCACTCAGG TCACTGACTA CCTGCTGCTC TTCCGCGTGT ATGGCCTGGA -ENSMUST00000005671_homosapiens CTCACCGTCA TCACTGAGTA CTTGCTGCTC TTCCGAGTCG CTGGCCTCGA -ENSRNOT00000019267_rattusnorvegicus CTCACGGTCA TCACCGAGTA CTTGCTGCTG TTTCGAGTGG CCGGCCTCGA -ENSPTRT00000013802_pantroglodytes CTCACGGTCA TTACCGAGTA CTTGCTGCTG TTCCGAGTGG CTGGCCTCGA - - -ENSMUST00000091291_musmusculus AAGTCTGAAA GACCTCTTCC CAAATCTCAC AGTCATCCGA GGCTCCCGTC -ENSCAFT00000026349_canisfamiliaris GAGCCTGCGG GACCTCTTCC CCAACCTCGC GGTCGTGCGT GGCGCCCGCC -ENSMUST00000005671_homosapiens GAGCCTGGGA GACCTCTTCC CCAACCTCAC AGTCATCCGT GGCTGGAAAC -ENSRNOT00000019267_rattusnorvegicus GAGCCTGGGA GACCTCTTCC CGAACCTCAC AGTCATCCGT GGCTGGAAAC -ENSPTRT00000013802_pantroglodytes GAGCCTCGGA GACCTCTTCC CCAACCTCAC GGTCATCCGC GGCTGGAAAC - - -ENSMUST00000091291_musmusculus TCTTCTTCAA CTATGCCCTG GTTATCTTCG AGATGGTCCA CCTGAAGGAG -ENSCAFT00000026349_canisfamiliaris TCTTCCTGGG TTATGCGCTG GTGGTCTACG AGATGCCGCA CCTGCGGGAC -ENSMUST00000005671_homosapiens TCTTCTACAA CTACGCACTG GTCATCTTCG AGATGACCAA TCTCAAGGAT -ENSRNOT00000019267_rattusnorvegicus TCTTCTACAA TTACGCACTG GTCATCTTCG AGATGACCAA TCTCAAGGAT -ENSPTRT00000013802_pantroglodytes TCTTCTACAA CTACGCCCTG GTCATCTTCG AGATGACCAA TCTCAAGGAT - - -ENSMUST00000091291_musmusculus CTGGGGCTTT ATAACCTCAT GAACATCACC CGGGGCTCTG TCCGCATCGA -ENSCAFT00000026349_canisfamiliaris GTGGGGCTGC CGGCGCTGGG GGCCGTGCTG CGTGGGGCCG TGCGGGTGGA -ENSMUST00000005671_homosapiens ATTGGGCTTT ATAATCTGAG GAACATTACT CGGGGGGCCA TCAGGATTGA -ENSRNOT00000019267_rattusnorvegicus ATTGGGCTTT ATAATCTGAG GAACATTACT CGGGGGGCCA TCAGGATTGA -ENSPTRT00000013802_pantroglodytes ATTGGGCTTT ACAACCTGAG GAACATTACT CGGGGGGCCA TCAGGATTGA - - -ENSMUST00000091291_musmusculus GAAGAATAAT GAGCTCTGCT ACCTGGCCAC TATCGACTGG TCCCGTATCC -ENSCAFT00000026349_canisfamiliaris GAAGAACCAG GAGCTCTGTC ATCTCTCCAC CATCGACTGG GGGCTGCTGC -ENSMUST00000005671_homosapiens GAAGAACGCC GACCTCTGTT ACCTCTCCAC CATAGACTGG TCTCTCATCT -ENSRNOT00000019267_rattusnorvegicus GAAAAACGCT GACCTCTGTT ACCTCTCCAC CATAGACTGG TCTCTCATCT -ENSPTRT00000013802_pantroglodytes GAAAAATGCT GACCTCTGTT ACCTCTCCAC TGTGGACTGG TCCCTGATCC - - -ENSMUST00000091291_musmusculus TGGATTCTGT GGAGGACAAC TACATTGTAC TGAACAAAGA TGACAACGAG -ENSCAFT00000026349_canisfamiliaris AGCCCTCGCC CAGCGCCAAC CACATCGTGG GCAACAA.GC TGCGT..GAG -ENSMUST00000005671_homosapiens TGGATGCGGT GTCCAATAAC TACATTGTGG GGAACAA.GC CCCCG..AAG -ENSRNOT00000019267_rattusnorvegicus TGGATGCGGT GTCCAATAAC TACATTGTGG GGAACAA.GC CCCCA..AAG -ENSPTRT00000013802_pantroglodytes TGGATGCGGT GTCCAATAAC TACATTGTGG GGAATAA.GC CCCCA..AAG - - -ENSMUST00000091291_musmusculus GAATGTGGGG ATGTCTGTCC AGGCACCGCC AAGGGCA.AG ACCAA..CTG -ENSCAFT00000026349_canisfamiliaris GAGTGTGCCG ACGTGTGCCC TGGTGTGCTG GGTGCCACCG GCCAGCCCTG -ENSMUST00000005671_homosapiens GAATGTGGGG ACCTGTGTCC AGGGACATTG GAGGAGA.AG CCCAT..GTG -ENSRNOT00000019267_rattusnorvegicus GAATGTGGGG ACCTGTGTCC AGGGACCTTG GAGGAGA.AG CCCAT..GTG -ENSPTRT00000013802_pantroglodytes GAATGTGGGG ACCTGTGTCC AGGGACCATG GAGGAGA.AG CCGAT..GTG - - -ENSMUST00000091291_musmusculus TCCTGCCACT GTCATCAATG GGCAGTTTGT GGAACGGTGC TGGACACACA -ENSCAFT00000026349_canisfamiliaris CGCCAGGACC ACCTTCAGTG GGCACACCGA CTACAGATGC TGGACCTCCA -ENSMUST00000005671_homosapiens TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA -ENSRNOT00000019267_rattusnorvegicus TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA -ENSPTRT00000013802_pantroglodytes TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA - - -ENSMUST00000091291_musmusculus GTCATTGTCA GAAAGTTTGC CCAACCATCT GTAAGTCACA TGGCTGCACA -ENSCAFT00000026349_canisfamiliaris GCCACTGCCA GAGAGTGTGT CCCTGCCCCC ATGGG...CT GGCCTGCACA -ENSMUST00000005671_homosapiens ATCGCTGCCA GAAAATGTGC CCAAGTGTGT GCGGGAAGCG AGCCTGCACC -ENSRNOT00000019267_rattusnorvegicus ATCGCTGCCA GAAAATGTGC CCAAGTGTGT GTGGGAAGCG AGCCTGCACC -ENSPTRT00000013802_pantroglodytes ACCGCTGCCA GAAAATGTGC CCGAGCACGT GTGGGAAGCG GGCGTGCACC - - -ENSMUST00000091291_musmusculus GCTGAAGGCC TGTGCTGCCA CAAAGAGTGC CTGGGCAACT GTTCGGAACC -ENSCAFT00000026349_canisfamiliaris GCTGGGGGTG AGTGCTGCCA CACTGAATGC CTGGGGGGCT GCAGCCGGCC -ENSMUST00000005671_homosapiens GAGAACAACG AGTGCTGCCA CCCGGAGTGC CTGGGCAGCT GCCACACACC -ENSRNOT00000019267_rattusnorvegicus GAGAACAATG AGTGCTGCCA CCCGGAGTGC CTAGGCAGCT GCCACACACC -ENSPTRT00000013802_pantroglodytes GAGAACAACG AGTGCTGCCA CCCCGAGTGC CTGGGCAGCT GCAGCGCGCC - - -ENSMUST00000091291_musmusculus TGATGACCCC ACCAAGTGTG TGGCCTGTCG CAACTTCTAT CTGGATGGTC -ENSCAFT00000026349_canisfamiliaris GGAAGACCCC CGCGCCTGCG TCGCCTGTCG CCACCTCTAC TTCCAGGGTG -ENSMUST00000005671_homosapiens GGACGACAAC ACAACCTGCG TGGCCTGCAG ACACTACTAC TACAAAGGCG -ENSRNOT00000019267_rattusnorvegicus GGACGACAAC ACAACCTGCG TGGCCTGCCG ACACTACTAC TACAAAGGCG -ENSPTRT00000013802_pantroglodytes TGACAACGAC ACGGCCTGTG TAGCTTGCCG CCACTACTAC TATGCCGGTG - - -ENSMUST00000091291_musmusculus AGTGTGTGGA GACCTGCCCG CCACCCTACT ATCACTTCCA GGACTGGCGC -ENSCAFT00000026349_canisfamiliaris CCTGCCACCG GGCCTGCCCT CCAGGCACCT ACCAGCACGA GTCCTGGCGC -ENSMUST00000005671_homosapiens TGTGTGTGCC TGCCTGCCCG CCTGGCACCT ACAGGTTCGA GGGCTGGCGC -ENSRNOT00000019267_rattusnorvegicus TGTGCGTGCC TGCCTGCCCG CCTGGCACCT ACAGGTTCGA GGGCTGGCGC -ENSPTRT00000013802_pantroglodytes TCTGTGTGCC TGCCTGCCCG CCCAACACCT ACAGGTTTGA GGGCTGGCGC - - -ENSMUST00000091291_musmusculus TGTGTGAACT TCAGCTTCTG ..CCAAGACC TTCA.CTTCA AATGCAGGAA -ENSCAFT00000026349_canisfamiliaris TGTGTCACGG CAGAGCGCTG TGCCAGCCTG CG...CTCTG TGCCCGGCCG -ENSMUST00000005671_homosapiens TGTGTGGATC GCGATTTCTG CGCCAACATC CCCAACGCTG AGAGCAGTGA -ENSRNOT00000019267_rattusnorvegicus TGTGTGGACC GGGATTTCTG CGCCAACATC CCCAACGCCG AGAGCAGTGA -ENSPTRT00000013802_pantroglodytes TGTGTGGACC GTGACTTCTG CGCCAACATC CTCAGCGCCG AGAGCAGCGA - - -ENSMUST00000091291_musmusculus CTCTCGGAAG CCTGGCTGCC ACCAATACGT CATTCACAAC AATAAGTGCA -ENSCAFT00000026349_canisfamiliaris CAC....... ........CT CCATCTTTGG CATCCACGAG GGCAGCTGCC -ENSMUST00000005671_homosapiens CTC....... ........GG ATGGCTTCGT TATCCACGAC GATGAGTGCA -ENSRNOT00000019267_rattusnorvegicus CTC....... ........AG ATGGCTTCGT CATCCACGAT GGCGAGTGCA -ENSPTRT00000013802_pantroglodytes CTC....... ........CG AGGGGTTTGT GATCCACGAC GGCGAGTGCA - - -ENSMUST00000091291_musmusculus TCCCCGAGTG CCCGTCTGGC TATACCATGA ATTCCAGC.. .AACTTGATG -ENSCAFT00000026349_canisfamiliaris TGGCCCAGTG CCCTCCGGGC TTCACCCGCA ACGGCAGC.. .AGCATGTTC -ENSMUST00000005671_homosapiens TGCAGGAGTG TCCCTCAGGC TTCATCCGCA ACAGCACCCA GAGCATGTAC -ENSRNOT00000019267_rattusnorvegicus TGCAGGAGTG TCCATCAGGC TTCATCCGCA ACAGCACCCA GAGCATGTAC -ENSPTRT00000013802_pantroglodytes TGCAGGAGTG CCCCTCGGGC TTCATCCGCA ACGGCAGCCA GAGCATGTAC - - -ENSMUST00000091291_musmusculus TGCACCCCAT GTCTGGGACC CTGCCCTAAG GTCTGCCAA. ATCCTC.GAA -ENSCAFT00000026349_canisfamiliaris TGCCACAAGT GTGAGGGGCT GTGCCCCAAA GAGTGCA... AGGT...... -ENSMUST00000005671_homosapiens TGTATCCCCT GCGAAGGCCC CTGCCCCAAA GTCTGCGGCG ATGAAGAGAA -ENSRNOT00000019267_rattusnorvegicus TGTATCCCCT GTGAAGGCCC CTGCCCCAAG GTCTGCGGCG ATGAAGAAAA -ENSPTRT00000013802_pantroglodytes TGCATCCCTT GTGAAGGTCC TTGCCCGAAG GTCTGTG... AGGAAGAAAA - - -ENSMUST00000091291_musmusculus GGTG.AGAAG ACCATTGATT CTGTGACATC TGCCCAGGAG CTCCGAGGCT -ENSCAFT00000026349_canisfamiliaris GGGTACCAAG ACCATCGACT CCACGCAGGC GGCACAGGAC CTGGCGGGCT -ENSMUST00000005671_homosapiens GAAAACGAAA ACCATCGATT CGGTGACTTC TGCTCAAATG CTCCAAGGAT -ENSRNOT00000019267_rattusnorvegicus GAAAACGAAA ACCATCGATT CTGTGACGTC TGCCCAGATG CTCCAAGGGT -ENSPTRT00000013802_pantroglodytes GAAAACAAAG ACCATTGATT CTGTTACTTC TGCTCAGATG CTCCAAGGAT - - -ENSMUST00000091291_musmusculus GCACTGTGAT CAACGGTAGC CTGATCATCA ACATCCGAGG GGGCAACAAC -ENSCAFT00000026349_canisfamiliaris GCACCCACGT GGAGGGGAGC CTCATCATCA ACCTCCGCCA GGGCTACAAC -ENSMUST00000005671_homosapiens GCACCATCCT GAAGGGCAAT CTGCTTATTA ACATCCGGAG AGGCAATAAC -ENSRNOT00000019267_rattusnorvegicus GCACCATTTT GAAGGGCAAT CTGCTTATTA ACATCCGGCG AGGCAATAAC -ENSPTRT00000013802_pantroglodytes GCACCATCTT CAAGGGCAAT TTGCTCATTA ACATCCGACG GGGGAATAAC - - -ENSMUST00000091291_musmusculus CTGGCAGCTG AGCTGGAGGC TAACCTTGGC CTCATTGAAG AAATTTCGGG -ENSCAFT00000026349_canisfamiliaris CTAGAGCTGG AGCTGCAACA GAGCCTGGGG CTGATAGAGA CCATCACTGG -ENSMUST00000005671_homosapiens ATTGCCTCGG AGTTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACCGG -ENSRNOT00000019267_rattusnorvegicus ATTGCCTCGG AATTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACTGG -ENSPTRT00000013802_pantroglodytes ATTGCTTCAG AGCTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACGGG - - -ENSMUST00000091291_musmusculus ATTTCTAAAG ATCCGCCGCT CCTATGCTCT GGTATCACTT TCTTTCTTCA -ENSCAFT00000026349_canisfamiliaris CTTCCTCAAG ATCAAGCACT CCTTTGCCCT CGTGTCCCTG GGCTTTTTCA -ENSMUST00000005671_homosapiens CTACGTGAAG ATCCGCCATT CTCATGCCTT GGTCTCCTTG TCCTTCCTGA -ENSRNOT00000019267_rattusnorvegicus CTACGTGAAG ATCCGCCATT CCCATGCCTT GGTCTCCTTG TCCTTCCTGA -ENSPTRT00000013802_pantroglodytes CTACGTGAAG ATCCGCCATT CTCATGCCTT GGTCTCCTTG TCCTTCCTAA - - -ENSMUST00000091291_musmusculus GGAAGCTACA TCTGATTCGA GGAGAGACCT TGGAAATTGG GAACTATTCT -ENSCAFT00000026349_canisfamiliaris AGAACCTCAA ACTCATCCGA GGGGACGCCA TGGTGGATGG GAACTACACC -ENSMUST00000005671_homosapiens AGAACCTTCG TCTCATCTTA GGAGAGGAGC AGCTGGAAGG GAACTACTCC -ENSRNOT00000019267_rattusnorvegicus AGAACCTTCG TCTCATCTTA GGAGAGGAGC AGCTAGAAGG GAACTACTCC -ENSPTRT00000013802_pantroglodytes AAAACCTTCG CCTCATCTTA GGAGAGGAGC AGCTAGAAGG GAATTACTCC - - -ENSMUST00000091291_musmusculus TTTTATGCCT TGGACAACCA GAACCTGAGG CAACTCTGGG ACTGGAG.CA -ENSCAFT00000026349_canisfamiliaris CTGTATGTGC TGGACAACCA GAACCTACAG CAGCTGGGGG CCTGGGTGGC -ENSMUST00000005671_homosapiens TTCTATGTCC TAGACAACCA GAACTTGCAG CAGCTGTGGG ACTGGAA.CC -ENSRNOT00000019267_rattusnorvegicus TTCTATGTCC TGGACAACCA GAACTTGCAG CAGCTGTGGG ACTGGAA.CC -ENSPTRT00000013802_pantroglodytes TTCTACGTCC TCGACAACCA GAACTTGCAG CAACTATGGG ACTGGGA.CC - - -ENSMUST00000091291_musmusculus AACACAACCT CACCATCACT CAGGGCAAGC TCTTCTTCCA TTACAACCCG -ENSCAFT00000026349_canisfamiliaris TGCGG.GGCT CACCATTCCC GTGGGCAAGA TATACTTCGC TTTCAACCCT -ENSMUST00000005671_homosapiens ACCGGAACCT GACCGTCAGG TCCGGAAAGA TGTACTTTGC TTTCAATCCC -ENSRNOT00000019267_rattusnorvegicus ACCGGAACCT GACCGTCAGG TCAGGGAAAA TGTACTTCGC TTTCAATCCC -ENSPTRT00000013802_pantroglodytes ACCGCAACCT GACCATCAAA GCAGGGAAAA TGTACTTTGC TTTCAATCCC - - -ENSMUST00000091291_musmusculus AAACTCTGCT TGTCTGAAAT TCACAAGATG GAAGAAGTCT CCGGAACTAA -ENSCAFT00000026349_canisfamiliaris CGCCTCTGCT TGGAGCACAT CTACCGCCTG GAAGAGGTGA CCGGCACGCG -ENSMUST00000005671_homosapiens AAGCTGTGTG TCTCCGAAAT TTACCGCATG GAGGAAGTGA CCGGAACCAA -ENSRNOT00000019267_rattusnorvegicus AAGCTGTGTG TCTCTGAAAT TTACCGGATG GAGGAGGTGA CAGGAACAAA -ENSPTRT00000013802_pantroglodytes AAATTATGTG TTTCCGAAAT TTACCGCATG GAGGAAGTGA CGGGGACTAA - - -ENSMUST00000091291_musmusculus GGGCCGTCAG GAGAGGAACG ACATTGCCCT GAAGACCAAT GGGGACCAGG -ENSCAFT00000026349_canisfamiliaris GGGACGGCAA AACAAGGCTG AGATCAACCC CCGCACCAAC GGAGACCGCG -ENSMUST00000005671_homosapiens GGGACGCCAG AGCAAAGGGG ACATAAACAC CAGGAACAAC GGAGAGCGAG -ENSRNOT00000019267_rattusnorvegicus GGGACGGCAG AGCAAAGGAG ACATAAACAC CAGGAACAAC GGAGAGCGAG -ENSPTRT00000013802_pantroglodytes AGGGCGCCAA AGCAAAGGGG ACATAAACAC CAGGAACAAC GGGGAGAGAG - - -ENSMUST00000091291_musmusculus CATCGTGTGA AAATGAATTG CTTAAATTTT CTTTCATTCG GACATCTTTT -ENSCAFT00000026349_canisfamiliaris CCGCCTGCCA AACTCGCACC CTGCGCTTCG TGTCCAACGT GACGCAAGCT -ENSMUST00000005671_homosapiens CTTCCTGTGA AAGTGATGTT CTCCGTTTCA CCTCCACCAC GACCTGGAAG -ENSRNOT00000019267_rattusnorvegicus CTTCCTGTGA AAGTGATGTT CTCCGTTTCA CCTCCACCAC CACCTGGAAG -ENSPTRT00000013802_pantroglodytes CCTCCTGTGA AAGTGACGTC CTGCATTTCA CCTCCACCAC CACGTCGAAG - - -ENSMUST00000091291_musmusculus GACAAGATCC TGTTGAGGTG GGAACCCTAC TGGCCCCCCG ACTTCCGAGA -ENSCAFT00000026349_canisfamiliaris GACAGCATCT TGCTGCGCTG GGAGCGCTAC GAGCCGCTGG AGGCTCGGGA -ENSMUST00000005671_homosapiens AACCGAATCA TCATAACGTG GCACCGGTAC CGGCCGCCGG ACTACCGGGA -ENSRNOT00000019267_rattusnorvegicus AACCGCATCA TCATAACGTG GCACCGGTAC CGGCCGCCGG ACTACCGGGA -ENSPTRT00000013802_pantroglodytes AATCGCATCA TCATAACCTG GCACCGGTAC CGGCCCCCTG ACTACAGGGA - - -ENSMUST00000091291_musmusculus TCTCCTGGGA TTCATGTTGT TCTACAAAGA GGCCCCTTAT CAGAATGTGA -ENSCAFT00000026349_canisfamiliaris CCTGCTCAGC TTCATCGTGT ACTACAAGGA GTCCCCATTC CAGAATGCCA -ENSMUST00000005671_homosapiens TCTCATCAGC TTCACAGTTT ACTACAAGGA GGCACCATTT AAAAACGTTA -ENSRNOT00000019267_rattusnorvegicus TCTCATCAGT TTCACAGTCT ACTACAAGGA GGCACCCTTT AAAAACGTCA -ENSPTRT00000013802_pantroglodytes TCTCATCAGC TTCACCGTTT ACTACAAGGA AGCACCCTTT AAGAATGTCA - - -ENSMUST00000091291_musmusculus CAGAGTTTGA TGGGCAGGAT GCTTGTGGCT CCAACAGCTG GACTGTGGTG -ENSCAFT00000026349_canisfamiliaris CAGAGCACAC AGGTCCAGAT GCCTGTGGAA CCCAGAGCTG GAACCTGCTG -ENSMUST00000005671_homosapiens CGGAATATGA CGGGCAGGAT GCCTGTGGCT CCAACAGCTG GAACATGGTG -ENSRNOT00000019267_rattusnorvegicus CGGAATACGA CGGGCAGGAT GCCTGTGGCT CCAACAGCTG GAACATGGTG -ENSPTRT00000013802_pantroglodytes CGGAGTATGA TGGGCAGGAC GCCTGCGGCT CCAACAGCTG GAACATGGTG - - -ENSMUST00000091291_musmusculus GATATTGACC CGCCCCAGAG GTCCAACGAC CCCAAGTCTC AGACCCCAAG -ENSCAFT00000026349_canisfamiliaris GATGTGGAGC TGCCCTTAAG ...CCGCACC C........A AGAACC.... -ENSMUST00000005671_homosapiens GATGTAGACC TGCCTCCGAA ...CAAGGAG G........G CGAGCC.... -ENSRNOT00000019267_rattusnorvegicus GACGTGGACC TGCCTCCGAA ...CAAGGAG G........G GGAGCC.... -ENSPTRT00000013802_pantroglodytes GACGTGGACC TCCCGCCCAA ...CAAGGAC G........T GGAGCC.... - - -ENSMUST00000091291_musmusculus CCACCCTGGG TGGCTGAT.G CGGGGCCTCA AACCCTGGAC CCAATACGCC -ENSCAFT00000026349_canisfamiliaris .....CGGGG T.AACTCTAG CA.CCCCTCA AGCCCTGGAC ACAATATGCA -ENSMUST00000005671_homosapiens .....TGGCA T.TTTACT.G CATGGGCTGA AGCCCTGGAC CCAGTATGCT -ENSRNOT00000019267_rattusnorvegicus .....TGGCA T.TTTGCT.G CATGGGCTGA AGCCCTGGAC CCAGTATGCA -ENSPTRT00000013802_pantroglodytes .....CGGCA T.CTTACT.A CATGGGCTGA AGCCCTGGAC TCAGTACGCC - - -ENSMUST00000091291_musmusculus ATCTTTGTGA AGACCTTGG. ..TTACCTTC TCTGATGAAC GGC.GGACCT -ENSCAFT00000026349_canisfamiliaris GTGTTTGTAC GGGCCATCAC ACTGACCACT G.CTGAGGAC AGCCCCCACC -ENSMUST00000005671_homosapiens GTCTATGTCA AGGCTGTGAC CCTCACCATG G.TGGAAAAC GACCATATCC -ENSRNOT00000019267_rattusnorvegicus GTCTATGTCA AGGCTGTGAC CCTCACCATG G.TGGAAAAC GACCACATCC -ENSPTRT00000013802_pantroglodytes GTTTACGTCA AGGCTGTGAC CCTCACCATG G.TGGAGAAT GACCATATCC - - -ENSMUST00000091291_musmusculus ATGGAGCCAA AAGTGATATC ATCTATGTGC AAACAGATGC CACTAATCCT -ENSCAFT00000026349_canisfamiliaris AAGGAGCCCA GAGCCCCATC GTCTACCTCC GAACCCTGCC TGCGGCGCCC -ENSMUST00000005671_homosapiens GTGGGGCCAA AAGTGAAATC TTGTACATTC GCACCAATGC TTCAGTCCCT -ENSRNOT00000019267_rattusnorvegicus GTGGGGCCAA AAGTGAAATC TTGTACATTC GCACCAACGC TTCAGTTCCT -ENSPTRT00000013802_pantroglodytes GTGGGGCCAA GAGTGAGATC TTGTACATTC GCACCAATGC TTCAGTTCCT - - -ENSMUST00000091291_musmusculus TCTGTCCCCC TGGATCCCAT ATCAGTTTCT AATTCCTCAT CTCAGATTAT -ENSCAFT00000026349_canisfamiliaris ACTGTGCCCC AGGACGTCAT CTCCACGTCC AATTCCTCGT CCCACCTGCT -ENSMUST00000005671_homosapiens TCCATTCCCC TAGATGTCCT CTCAGCATCA AACTCTTCCT CTCAGCTGAT -ENSRNOT00000019267_rattusnorvegicus TCCATTCCTC TAGATGTCCT CTCGGCATCA AACTCCTCCT CTCAGCTGAT -ENSPTRT00000013802_pantroglodytes TCCATTCCCT TGGACGTTCT TTCAGCATCG AACTCCTCTT CTCAGTTAAT - - -ENSMUST00000091291_musmusculus CTTAAAGTGG AAGCCCCCCT CTGACCCCAA TGGCAACATC ACACACTACC -ENSCAFT00000026349_canisfamiliaris CGTGCGCTGG AAGCCACCGA TTCAGCGCAA CGGGAACATC ACCTACTACC -ENSMUST00000005671_homosapiens TGTGAAGTGG AATCCTCCAA CTCTGCCCAA TGGTAACTTG AGTTACTACA -ENSRNOT00000019267_rattusnorvegicus CGTGAAGTGG AACCCCCCAA CTCTGCCCAA TGGTAACTTG AGTTACTACA -ENSPTRT00000013802_pantroglodytes CGTGAAGTGG AACCCTCCCT CTCTGCCCAA CGGCAACCTG AGTTACTACA - - -ENSMUST00000091291_musmusculus TGGTGTACTG GGAGAGGCAA GCAGAGGACA GCGAGCTGTT TGAGCTGGAT -ENSCAFT00000026349_canisfamiliaris TGGTGCTGTG GCAGCGTCTG GCGGAGGACG GCGACCTCTA TCTCAACGAC -ENSMUST00000005671_homosapiens TTGTGAGGTG GCAGCGGCAG CCCCAGGATG GTTACCTGTA CCGGCACAAC -ENSRNOT00000019267_rattusnorvegicus TTGTGAGGTG GCAGCGGCAG CCGCAGGATG GCTATCTGTT CCGGCACAAC -ENSPTRT00000013802_pantroglodytes TTGTGCGCTG GCAGCGGCAG CCTCAGGACG GCTACCTTTA CCGGCACAAT - - -ENSMUST00000091291_musmusculus TATTGTCTCA AAGGGCTGA. AGCTCCCTTC ACGGACCTGG TC...CCCAC -ENSCAFT00000026349_canisfamiliaris TACTGCCACC GCGGCCTGCG GCTGCCCACC AGCAACAACG AC...CCGC. -ENSMUST00000005671_homosapiens TACTGCTCCA AAGA.CAA.. AATACCCATC AGAAAGTACG CCGATGGTA. -ENSRNOT00000019267_rattusnorvegicus TACTGCTCCA AAGA.CAA.. AATACCCATC AGAAAGTACG CCGATGGTA. -ENSPTRT00000013802_pantroglodytes TACTGCTCCA AAGA.CAA.. AATCCCCATC AGGAAGTATG CCGACGGCA. - - -ENSMUST00000091291_musmusculus CCTTTGAGTC TGATGAT.T. .CTCAGAAGC ACAA.TCAGA .GT.GAGTA. -ENSCAFT00000026349_canisfamiliaris GCTTCGACCG CGAGGA.... .CGGTGAACT CGAAG.CCGA GATGGAGCC. -ENSMUST00000005671_homosapiens CCATCGACGT GGAGGAGGTG ACGGAAAATC CCAAGACAGA AGT.GTGTGG -ENSRNOT00000019267_rattusnorvegicus CCATCGATGT GGAGGAGGTG ACAGAAAATC CCAAGACAGA AGT.GTGCGG -ENSPTRT00000013802_pantroglodytes CCATCGACAT TGAGGAGGTC ACAGAGAACC CCAAGACTGA GGT.GTGTGG - - -ENSMUST00000091291_musmusculus TGACGACTCG GCCAGTGAGT GC.TGCTCAT GCCC.TAAGA CTGACTCTCA -ENSCAFT00000026349_canisfamiliaris .GG.GCTGC. ...TGCCCTT GCCAGCACCC ACCGCCTGGG CAG..GTCCT -ENSMUST00000005671_homosapiens TGGTGATAA. ..AGGGCCAT GC.TGCGCTT GCCC.TAAAA CTGAAGCTGA -ENSRNOT00000019267_rattusnorvegicus TGGTGATAA. ..AGGGCCGT GC.TGTGCCT GTCC.TAAAA CCGAAGCTGA -ENSPTRT00000013802_pantroglodytes TGGGGAGAA. ..AGGGCCTT GC.TGCGCCT GCCC.CAAAA CTGAAGCCGA - - -ENSMUST00000091291_musmusculus GATCCTGAAG GAGCTGGAGG AGTCTTCATT CAGGAAGACC TTCGAGGATT -ENSCAFT00000026349_canisfamiliaris GCCGCCGCTG GAGGCGCAAG AGGCCTCGTT CCAGAAGAAG TTCGAAAACT -ENSMUST00000005671_homosapiens GAAGCAGGCT GAGAAGGAGG AGGCTGAGTA CCGTAAAGTC TTTGAGAATT -ENSRNOT00000019267_rattusnorvegicus GAAGCAGGCT GAGAAGGAGG AGGCTGAGTA CCGTAAAGTC TTTGAGAATT -ENSPTRT00000013802_pantroglodytes GAAGCAGGCC GAGAAGGAGG AGGCTGAATA CCGCAAAGTC TTTGAGAATT - - -ENSMUST00000091291_musmusculus ACCTGCACAA CGTGGTTTTT GTCCCCAGGC CATCCCGAAA GCGAAGATCC -ENSCAFT00000026349_canisfamiliaris TCCTGCACAA CGCCATCACC ATCCCCAAGT CCCCCTGGAA GGTGACGTCC -ENSMUST00000005671_homosapiens TCCTTCACAA TTCCATCTTT GTGCCCAGGC CCGAAAGGAG GCGGAGAGAC -ENSRNOT00000019267_rattusnorvegicus TCCTTCACAA CTCCATCTTT GTGCCCAGAC CTGAGAGGAG GCGGAGAGAT -ENSPTRT00000013802_pantroglodytes TCCTGCACAA CTCCATCTTC GTGCCCAGAC CTGAAAGGAA GCGGAGAGAT - - -ENSMUST00000091291_musmusculus CTTGAAGAGG TGGGGAATGT GACA...GCC ACCACACTCA .CACTTCCAG -ENSCAFT00000026349_canisfamiliaris GTCA.ATAAG AGCCCTCAAA GA.......C ATGCGG.GGA GGCACCGCCG -ENSMUST00000005671_homosapiens GTCATGCAAG TGGCCAACAC GACCATGTCC AGCCGAAGCA GGAACACCAC -ENSRNOT00000019267_rattusnorvegicus GTCCTGCAGG TGGCTAACAC CACCATGTCC AGCCGAAGCA GGAACACCAC -ENSPTRT00000013802_pantroglodytes GTCATGCAAG TGGCCAACAC CACCATGTCC AGCCGAAGCA GGAACACCAC - - -ENSMUST00000091291_musmusculus ATTTCCCCAA CGT.CTCCTC TACCATTGTG CCC.ACAAGT CAG.G.AGGA -ENSCAFT00000026349_canisfamiliaris GGC.GGCCGG GGCGCTCC.. .GGCTTGGGG GC..AACAGC TCG.....GA -ENSMUST00000005671_homosapiens GGT.AGCTGA CAC.CTACAA TATCACAGAC CCGGAGGAGT TCGAGACAGA -ENSRNOT00000019267_rattusnorvegicus GGT.AGCTGA CAC.CTACAA TATCACAGAC CCGGAAGAGT TCGAGACAGA -ENSPTRT00000013802_pantroglodytes GGC.CGCAGA CAC.CTACAA CATCACCGAC CCGGAAGAGC TGGAGACAGA - - -ENSMUST00000091291_musmusculus GCACAGGCCA TTTGAGA... AAGTGGTGAA CAAGGAGTCA CTTGTCATCT -ENSCAFT00000026349_canisfamiliaris TTTCGAGATC CAGGAGGACA AAGTGC...C CCGGGAGCGA GCAGTGTTGA -ENSMUST00000005671_homosapiens GTACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGG ACTGTCATCT -ENSRNOT00000019267_rattusnorvegicus ATACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGG ACTGTCATTT -ENSPTRT00000013802_pantroglodytes GTACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGA ACTGTGATTT - - -ENSMUST00000091291_musmusculus CTGGCCTGAG ACACTTCACT GGGTACCGCA TTGAGCTGCA GGCATGCAAT -ENSCAFT00000026349_canisfamiliaris GTGGTCTGCG CCACTTTACG GAATATCGTA TCGACATCCA CGCCTGCAAC -ENSMUST00000005671_homosapiens CCAACCTCCG GCCTTTCACT CTGTACCGCA TCGATATCCA CAGCTGCAAC -ENSRNOT00000019267_rattusnorvegicus CCAACCTCCG GCCTTTCACT CTGTACCGTA TCGATATCCA CAGCTGCAAC -ENSPTRT00000013802_pantroglodytes CTAACCTTCG GCCTTTCACA TTGTACCGCA TCGATATCCA CAGCTGCAAC - - -ENSMUST00000091291_musmusculus CAAGATTCCC CAGAT.GAGA GGTGCAGTGT GGCTGCCTAC GTCAGTGCCC -ENSCAFT00000026349_canisfamiliaris CACGCGGCT. CACACCGTGG GCTGCAGCGC GGCCACGTTC GTCTTCGCGC -ENSMUST00000005671_homosapiens CACGAGGCT. GAGAAGCTGG GCTGCAGCGC CTCCAACTTC GTCTTTGCGA -ENSRNOT00000019267_rattusnorvegicus CACGAGGCT. GAGAAGCTGG GCTGCAGCGC CTCCAACTTT GTCTTTGCAA -ENSPTRT00000013802_pantroglodytes CACGAGGCT. GAGAAGCTGG GCTGCAGCGC CTCCAACTTT GTCTTTGCAA - - -ENSMUST00000091291_musmusculus GGACCATGCC TGAAGCTAAG GCAGATGACA TCGTTGGCCC TGTGACTCAT -ENSCAFT00000026349_canisfamiliaris GCACCATGCC GCACAGAGAA GCTGATGGCA TCCCAGGGAA GGTGGCCTGG -ENSMUST00000005671_homosapiens GAACCATGCC AGCAGAAGGA GCAGATGATA TCCCTGGTCC GGTGACCTGG -ENSRNOT00000019267_rattusnorvegicus GAACCATGCC AGCAGAAGGA GCAGATGACA TTCCTGGCCC AGTGACCTGG -ENSPTRT00000013802_pantroglodytes GGACTATGCC CGCAGAAGGA GCAGATGACA TTCCTGGGCC AGTGACCTGG - - -ENSMUST00000091291_musmusculus GAA...ATCT TTGAGAACAA TGTTGTACAC TTAATGTGGC AAGAGCCAAA -ENSCAFT00000026349_canisfamiliaris GAGGCAGCCA GCAAAAGC.. .AGTGTCCTC CTGCGCTGGC TGGAGCCACC -ENSMUST00000005671_homosapiens GAGCCAAGAC CCGAAAAC.. .TCCATCTTT TTAAAGTGGC CAGAACCCGA -ENSRNOT00000019267_rattusnorvegicus GAGCCAAGAC CTGAAAAC.. .TCCATCTTT TTAAAGTGGC CAGAACCCGA -ENSPTRT00000013802_pantroglodytes GAGCCAAGGC CTGAAAAC.. .TCCATCTTT TTAAAGTGGC CGGAACCTGA - - -ENSMUST00000091291_musmusculus GGAACCTAAT GGTCTGATTG TGCTATATGA AGTGAGCTAT CGCCGATATG -ENSCAFT00000026349_canisfamiliaris TGACCCCAAC GGACTCATCC TCAAGTATGA AATCAAGTAC CGCCGCTTGG -ENSMUST00000005671_homosapiens GAACCCCAAC GGATTGATCC TAATGTATGA AATTAAATAC GGGTCGCAA. -ENSRNOT00000019267_rattusnorvegicus GAACCCCAAC GGATTGATTC TAATGTATGA AATAAAATAC GGATCGCAA. -ENSPTRT00000013802_pantroglodytes GAATCCCAAT GGATTGATTC TAATGTATGA AATAAAATAC GGATCACAA. - - -ENSMUST00000091291_musmusculus GTGATGAGGA G.CTGCACCT CTGTGTCTCC CGGAAGCATT TTGCCCTGGA -ENSCAFT00000026349_canisfamiliaris GAGAGGAGGC CACAGT.GCT ATGTGTGTCC CGCCTACGAT ATGCCAAATT -ENSMUST00000005671_homosapiens ..GTCGAGGA T.CAGCGGGA ATGTGTGTCC AGACAGGAGT ACAGGAAGTA -ENSRNOT00000019267_rattusnorvegicus ..GTCGAGGA T.CAGCGGGA ATGTGTGTCC AGACAGGAGT ACAGGAAGTA -ENSPTRT00000013802_pantroglodytes ..GTTGAGGA T.CAGCGAGA ATGTGTGTCC AGACAGGAAT ACAGGAAGTA - - -ENSMUST00000091291_musmusculus GCGGGGCTGC AGGCTGCGAG GGCTCTCCCC AGGAAACTAC AGTGTTCGAG -ENSCAFT00000026349_canisfamiliaris TGGGGGTGTC CAGCTGGCCC TGCTGCCCCC TGGAAACTAC TCCGCCAGAG -ENSMUST00000005671_homosapiens CGGAGGGGCC AAACTCAACC GTCTAAACCC AGGGAACTAT ACAGCCCGGA -ENSRNOT00000019267_rattusnorvegicus TGGAGGGGCC AAACTTAACC GTCTAAACCC AGGGAACTAT ACGGCCCGGA -ENSPTRT00000013802_pantroglodytes TGGAGGGGCC AAGCTAAACC GGCTAAACCC GGGGAACTAC ACAGCCCGGA - - -ENSMUST00000091291_musmusculus TCCGGGCTAC CTCTCTGGCA GGAAATGGCT CCTGGACAGA ACCCACCTAT -ENSCAFT00000026349_canisfamiliaris TTCGGGCAAC CTCGCTGGCT GGCAACGGCT CCTGGACAGA AAGTATCGCT -ENSMUST00000005671_homosapiens TTCAGGCTAC CTCCCTCTCT GGGAATGGGT CATGGACAGA TCCTGTGTTC -ENSRNOT00000019267_rattusnorvegicus TTCAGGCTAC CTCCCTCTCT GGGAATGGGT CGTGGACAGA TCCTGTGTTC -ENSPTRT00000013802_pantroglodytes TTCAGGCCAC ATCTCTCTCT GGGAATGGGT CGTGGACAGA TCCTGTGTTC - - -ENSMUST00000091291_musmusculus TTTTATGTGA CTGAT.TATT TAGATGTCCC ATCAAA.TAT TGCCAAAATT -ENSCAFT00000026349_canisfamiliaris TTCTACGTCC CAGGCCCA.. ..GAGG.... AGGAAGACTC CGGGGGGCTG -ENSMUST00000005671_homosapiens TTCTATGTCC CCGCC.AA.. ..AACGACGT ATGAGAACTT CATGCATCTG -ENSRNOT00000019267_rattusnorvegicus TTCTATGTCC CAGCC.AA.. ..AACAACGT ATGAGAATTT CATGCATCTG -ENSPTRT00000013802_pantroglodytes TTCTATGTCC AGGCC.AA.. ..AACAGGAT ATGAAAACTT CATCCATCTG - - -ENSMUST00000091291_musmusculus ATCATTGGAC CCCTCATCTT TGTCTTCCTC TTCAGTGTTG ..TGATTGGA -ENSCAFT00000026349_canisfamiliaris CACGTCCTTC TCACTG...T CACCCCCGTG GGGCTCAT.. ....GCTGTT -ENSMUST00000005671_homosapiens ATCATTGCTC TGCCGG...T TGCCATCCTG CTGATCGTTG GGGGGCTGGT -ENSRNOT00000019267_rattusnorvegicus ATCATTGCTC TGCCGG...T TGCCATCCTG CTGATTGTGG GGGGCCTGGT -ENSPTRT00000013802_pantroglodytes ATCATCGCTC TGCCCG...T CGCTGTCCTG TTGATCGTGG GAGGGTTGGT - - -ENSMUST00000091291_musmusculus .AGTAT...T TATCTATTTC TGAGAAAGAG G.....CAGC CGGATGGGCC -ENSCAFT00000026349_canisfamiliaris CATCATTCTT GCCGCCCTCG GTTTCTTC.. ....TACGGC AGGAAGAG.A -ENSMUST00000005671_homosapiens TATCATGCTG TATGTCTTCC ATAGAAAGAG AAATAACAGC AGGTTGGG.C -ENSRNOT00000019267_rattusnorvegicus AATCATGCTG TATGTCTTCC ATAGAAAGAG G.......G. TGTCTGGGCC -ENSPTRT00000013802_pantroglodytes GATTATGCTG TACGTCTTCC ATAGAAAGAG AAATAACAGC AGGCTGGG.G - - -ENSMUST00000091291_musmusculus AATGGGACCA CTGTATGCAT CTTCAAACCC TGAGTACCT. CAGTGCCAGT -ENSCAFT00000026349_canisfamiliaris AACAG.CACC CTCTATGCCT CAGTGAATCC GGAGTACTT. CAGCGCCTCT -ENSMUST00000005671_homosapiens AATGG.AGTG CTGTATGCTT CTGTGAACCC CGAGTATTT. CAGCGCAGCT -ENSRNOT00000019267_rattusnorvegicus AGCAG.AAGG CAGTAG.... TTGGAAA... GGGCCATTTC CATCCTGTCT -ENSPTRT00000013802_pantroglodytes AATGG.AGTG CTGTATGCCT CTGTGAACCC GGAGTACTT. CAGCGCTGCT - - -ENSMUST00000091291_musmusculus GATGTGTTTC CATCTTCTGT GTACGTGCCG GACGAGTGGG AGGTGCCTCG -ENSCAFT00000026349_canisfamiliaris GAT....... ........AT GTACATCCCT GATGAGTGGG AGGTGCCTCG -ENSMUST00000005671_homosapiens GAT....... ........GT GTACGTGCCT GATGAATGGG AGGTAGCTCG -ENSRNOT00000019267_rattusnorvegicus GTT....... ...C.CTAGT GTACGTGCCT GATGAATGGG AGGTAGCTCG -ENSPTRT00000013802_pantroglodytes GAT....... ........GT GTACGTTCCC GATGAGTGGG AGGTGGCTCG - - -ENSMUST00000091291_musmusculus AGAGAAGATC ACCCTTCTTC GAGAGCTGGG GCAGGGATCC TTTGGTATGG -ENSCAFT00000026349_canisfamiliaris GGAGCAGATC TCCATAATCC GAGAGCTGGG CCAGGGCTCC TTTGGGATGG -ENSMUST00000005671_homosapiens AGAGAAGATC ACCATGAACC GGGAGCTCGG ACAAGGGTCC TTTGGGATGG -ENSRNOT00000019267_rattusnorvegicus GGAGAAGATC ACCATGAACC GGGAGCTCGG ACAAGGGTCC TTCGGGATGG -ENSPTRT00000013802_pantroglodytes GGAGAAGATC ACCATGAGCC GGGAACTTGG GCAGGGGTCC TTTGGGATGG - - -ENSMUST00000091291_musmusculus TGTATGAAGG CAATGC.CAA GGATA..TCA TCAAGGGTGA GGCAGAGACC -ENSCAFT00000026349_canisfamiliaris TATATGAAGG CCTGGCACAA GGACTAGAGG CTGGAGAGGA GTCC.ACACC -ENSMUST00000005671_homosapiens TCTATGAAGG AGTGGC.CAA GGGTG..TGG TCAAGGATGA ACCCGAAACC -ENSRNOT00000019267_rattusnorvegicus TCTATGAAGG AGTGGC.CAA GGGCG..TGG TCAAGGACGA GCCTGAAACC -ENSPTRT00000013802_pantroglodytes TCTATGAAGG AGTTGC.CAA GGGTG..TGG TGAAAGATGA ACCTGAAACC - - -ENSMUST00000091291_musmusculus CGTGTTGCGG TTAAGACTGT CAATGAGTCA GCCAGTCTTC GAGAACGGAT -ENSCAFT00000026349_canisfamiliaris C..GTGGCCC TGAAGACAGT GAATGAGTTG GCCAGCCCAC GAGAACGCAT -ENSMUST00000005671_homosapiens AGAGTGGCCA TCAAGACGGT AAACGAGGCT GCAAGTATGC GTGAAAGAAT -ENSRNOT00000019267_rattusnorvegicus AGAGTGGCCA TCAAGACAGT GAATGAGGCT GCAAGTATGC GTGAGAGAAT -ENSPTRT00000013802_pantroglodytes AGAGTGGCCA TTAAAACAGT GAACGAGGCC GCAAGCATGC GTGAAAGGAT - - -ENSMUST00000091291_musmusculus CGAGTTCCTC AATGAGGCAT CAGTCATGAA GGGATTCACC TGCCATCATG -ENSCAFT00000026349_canisfamiliaris TGAGTTCCTC AAGGAAGCTT CTGTCATGAA GGCATTCAAG TGTCACCATG -ENSMUST00000005671_homosapiens CGAGTTTCTC AACGAGGCCT CGGTGATGAA GGAGTTCAAT TGTCACCATG -ENSRNOT00000019267_rattusnorvegicus TGAGTTTCTC AACGAGGCCT CAGTGATGAA GGAGTTCAAC TGTCACCATG -ENSPTRT00000013802_pantroglodytes TGAGTTTCTC AACGAAGCTT CTGTGATGAA GGAGTTCAAT TGTCACCATG - - -ENSMUST00000091291_musmusculus TGGTCCGCCT TCTTGGGGTG GTATCCAAAG GACAGCCAAC GCTGGTAGTG -ENSCAFT00000026349_canisfamiliaris TGGTACGTCT CCTGGGTGTT GTGTCTCAAG GCCAGCCAAC TCTGGTCATC -ENSMUST00000005671_homosapiens TGGTCCGGTT GCTGGGTGTG GTATCCCAAG GCCAGCCCAC CCTGGTCATC -ENSRNOT00000019267_rattusnorvegicus TGGTCCGGTT GCTGGGTGTA GTATCCCAAG GCCAGCCCAC CCTGGTCATC -ENSPTRT00000013802_pantroglodytes TGGTGCGATT GCTGGGTGTG GTGTCCCAAG GCCAGCCAAC ACTGGTCATC - - -ENSMUST00000091291_musmusculus ATGGAATTGA TGGCTCATGG AGACCTGAAA AGTCACCTCC GTTCTCTGAG -ENSCAFT00000026349_canisfamiliaris ATGGAGTTAA TGACTCGTGG GGACCTCAAG AGCCATCTTC GATCTCTGCG -ENSMUST00000005671_homosapiens ATGGAACTAA TGACACGCGG TGATCTCAAA AGTTATCTCC GGTCTCTGAG -ENSRNOT00000019267_rattusnorvegicus ATGGAACTAA TGACACGTGG CGATCTCAAA AGTTATCTCC GGTCTCTAAG -ENSPTRT00000013802_pantroglodytes ATGGAACTGA TGACACGGGG CGATCTCAAA AGTTATCTCC GGTCTCTGAG - - -ENSMUST00000091291_musmusculus GCCAGATGCT GA...GAATA ACCCAGGCCG CCCTCCCCCT ACCTTGCAAG -ENSCAFT00000026349_canisfamiliaris GCCTGAGGCA GA...GAACA ACCCTGGGCT CCCACGGCCA GCACTGGGAG -ENSMUST00000005671_homosapiens GCCAGAAGTG GAGCAGAATA ATCTAGTCCT CATTCCTCCG AGCTTAAGCA -ENSRNOT00000019267_rattusnorvegicus GCCAGAGGTG GA...GAATA ATCTAGTCCT GATTCCTCCG AGCTTAAGCA -ENSPTRT00000013802_pantroglodytes GCCAGAAATG GA...GAATA ATCCAGTCCT AGCACCTCCA AGCCTGAGCA - - -ENSMUST00000091291_musmusculus AAATGATTCA GATGACAGCA GAAATTGCTG ATGGCATGGC ATACTTGAAC -ENSCAFT00000026349_canisfamiliaris ATATGATCCA GATGGCTGGT GAGATTGCAG ATGGCATGGC TTACCTCGCT -ENSMUST00000005671_homosapiens AGATGATCCA GATGGCTGGA GAGATTGCAG ATGGCATGGC CTACCTCAAT -ENSRNOT00000019267_rattusnorvegicus AGATGATCCA GATGGCTGGA GAGATTGCAG ATGGCATGGC CTACCTCAAT -ENSPTRT00000013802_pantroglodytes AGATGATTCA GATGGCCGGA GAGATTGCAG ACGGCATGGC ATACCTCAAC - - -ENSMUST00000091291_musmusculus GCCAAGAAGT TTGTGCACCG GGACCTGGCA GCTCGAAACT GCATGGTTGC -ENSCAFT00000026349_canisfamiliaris GCCAACAAGT TTGTGCATCG AGACCTGGCA GCCAGAAACT GCATGGTGTC -ENSMUST00000005671_homosapiens GCCAACAAGT TCGTCCACAG AGACCTTGCT GCTAGGAACT GCATGGTAGC -ENSRNOT00000019267_rattusnorvegicus GCCAACAAGT TCGTCCACAG AGACCTGGCT GCTCGGAACT GCATGGTAGC -ENSPTRT00000013802_pantroglodytes GCCAATAAGT TCGTCCACAG AGACCTTGCT GCCCGGAATT GCATGGTAGC - - -ENSMUST00000091291_musmusculus CCATGATTTT ACTGTCAAAA TTGGAGACTT TGGAATGACA AGGGACATCT -ENSCAFT00000026349_canisfamiliaris CCAGGACTTC ACCGTCAAGA TTGGGGACTT CGGGATGACT CGAGACGTGT -ENSMUST00000005671_homosapiens CGAAGATTTC ACAGTCAAAA TTGGAGATTT CGGTATGACA CGAGACATCT -ENSRNOT00000019267_rattusnorvegicus TGAAGATTTC ACAGTCAAAA TTGGAGATTT TGGTATGACA CGAGACATCT -ENSPTRT00000013802_pantroglodytes CGAAGATTTC ACAGTCAAAA TCGGAGATTT TGGTATGACG CGAGATATCT - - -ENSMUST00000091291_musmusculus ACGAGACAGA TTACTATCGG AAAGGGGGCA AGGGACTGCT TCCTGTGAGG -ENSCAFT00000026349_canisfamiliaris ACGAGACAGA CTATTACCGC AAGGGCGGGA AAGGGCTGCT GCCCGTGCGC -ENSMUST00000005671_homosapiens ACGAGACGGA CTACTACCGG AAAGGCGGGA AGGGGTTGCT GCCTGTGCGC -ENSRNOT00000019267_rattusnorvegicus ACGAGACGGA CTACTACCGG AAAGGCGGGA AGGGCTTGCT GCCTGTGCGC -ENSPTRT00000013802_pantroglodytes ATGAGACAGA CTATTACCGG AAAGGAGGGA AAGGGCTGCT GCCCGTGCGC - - -ENSMUST00000091291_musmusculus TGGATGTCAC CTGAGTCCCT GAAGGATGGA GTCTTTACTG CTTCTTCTGA -ENSCAFT00000026349_canisfamiliaris TGGATGGCCC CCGAGTCCCT CAAAGATGGA ATCTTCACCA CACATTCGGA -ENSMUST00000005671_homosapiens TGGATGTCTC CCGAGTCCCT CAAGGATGGT GTCTTCACTA CTCATTCTGA -ENSRNOT00000019267_rattusnorvegicus TGGATGTCTC CCGAGTCCCT CAAGGATGGC GTCTTCACCA CTCATTCCGA -ENSPTRT00000013802_pantroglodytes TGGATGTCTC CCGAGTCCCT CAAGGATGGA GTCTTCACCA CTTACTCGGA - - -ENSMUST00000091291_musmusculus TATGTGGTCC TTTGGGGTGG TCCTTTGGGA AATCACTAGC CTGGCTGAGC -ENSCAFT00000026349_canisfamiliaris TGTTTGGTCC TTCGGGGTGG TGCTCTGGGA GATCGTGACC CTAGCTGAAC -ENSMUST00000005671_homosapiens TGTCTGGTCC TTCGGGGTCG TCCTCTGGGA GATCGCCACG CTGGCTGAGC -ENSRNOT00000019267_rattusnorvegicus TGTCTGGTCC TTTGGGGTCG TCCTCTGGGA GATCGCCACT CTGGCTGAGC -ENSPTRT00000013802_pantroglodytes CGTCTGGTCC TTCGGGGTCG TCCTCTGGGA GATCGCCACA CTGGCCGAGC - - -ENSMUST00000091291_musmusculus AACCTTATCA AGGCCTGTCT AATGAACAGG TGTTGAAGTT TGTCATGGAT -ENSCAFT00000026349_canisfamiliaris AGCCCTACCA GGGTTTATCC AACGAGCAGG TGCTCAAGTT TGTCATGGAT -ENSMUST00000005671_homosapiens AGCCCTACCA GGGCTTGTCC AACGAGCAAG TTCTTCGTTT CGTCATGGAG -ENSRNOT00000019267_rattusnorvegicus AGCCGTACCA GGGCCTGTCC AACGAGCAAG TTCTTCGTTT CGTCATGGAG -ENSPTRT00000013802_pantroglodytes AGCCCTACCA GGGCTTGTCC AACGAGCAAG TCCTTCGCTT CGTCATGGAG - - -ENSMUST00000091291_musmusculus GGAGGCTATC TGGATCCCCC TGATAACTGT CCAGAGAGAC TCACTGACCT -ENSCAFT00000026349_canisfamiliaris GGTGGGGTCC TGGAGGAGCT GGAGAGCTGT CCCCTTCAGC TGCAAGAACT -ENSMUST00000005671_homosapiens GGTGGCCTTC TGGACAAGCC GGACAACTGC CCTGATATGC TGTTTGAACT -ENSRNOT00000019267_rattusnorvegicus GGCGGCCTTC TGGACAAGCC GGATAACTGC CCCGATATGC TGTTTGAACT -ENSPTRT00000013802_pantroglodytes GGCGGCCTTC TGGACAAGCC AGACAACTGT CCCGACATGC TGTTTGAACT - - -ENSMUST00000091291_musmusculus GATGCGCATG TGCTGGCAGT TCAACCCCAA GATGAGGCCA ACCTTCCTGG -ENSCAFT00000026349_canisfamiliaris GATGAGCCGC TGCTGGCAGC AGAACCCACG CCTGCGGCCC ACCTTCACCC -ENSMUST00000005671_homosapiens TATGCGCATG TGCTGGCAGT ATAACCCCAA GATGCGGCCC TCCTTCCTGG -ENSRNOT00000019267_rattusnorvegicus TATGCGCATG TGCTGGCAGT ACAACCCCAA GATGCGGCCC TCCTTCCTGG -ENSPTRT00000013802_pantroglodytes GATGCGCATG TGCTGGCAGT ATAACCCCAA GATGAGGCCT TCCTTCCTGG - - -ENSMUST00000091291_musmusculus AAATCGTCAA CCTGCTCAAG GATGACCTCC ACCCCAGCTT TCCAGAAGTT -ENSCAFT00000026349_canisfamiliaris ACATCCTGGA CAGCATTCGG GGGGAACTGC GGCCCTCTTT CCGCCTCTTT -ENSMUST00000005671_homosapiens AGATCATCGG CAGCATCAAG GATGAGATGG AGCCCAGCTT CCAGGAGGTC -ENSRNOT00000019267_rattusnorvegicus AGATCATCGG AAGCATCAAG GATGAGATGG AGCCCAGTTT CCAGGAGGTC -ENSPTRT00000013802_pantroglodytes AGATCATCAG CAGCATCAAA GAGGAGATGG AGCCTGGCTT CCGGGAGGTC - - -ENSMUST00000091291_musmusculus TCCTTCTTCT ACAGCGAGGA GAACAAGGCT CCTGAGAGTG AGGAGCTGGA -ENSCAFT00000026349_canisfamiliaris TCCTTCTATT ACAGCCCAGA GTG....... ......CCAG GGGAGCCAGG -ENSMUST00000005671_homosapiens TCCTTCTACT ACAGCGAGGA GAACAAGCCT CCCGAGCCAG AGGAGCTGGA -ENSRNOT00000019267_rattusnorvegicus TCCTTCTACT ACAGCGAGGA GAACAAGCCT CCAGAGCCGG AGGAGCTGGA -ENSPTRT00000013802_pantroglodytes TCCTTCTACT ACAGCGAGGA GAACAAGCTG CCCGAGCCGG AGGAGCTGGA - - -ENSMUST00000091291_musmusculus ....GAT... .........G GAGTTTGAAG ACATGGAGAA TGTCCCGTTG -ENSCAFT00000026349_canisfamiliaris GGGCCCT... .........G CTGCCTAATG CC........ .........A -ENSMUST00000005671_homosapiens ....GAT... .........G GAGCCTGAGA ACATGGAGAG CGTCCCACTG -ENSRNOT00000019267_rattusnorvegicus ....GATGGA GCTGGAGCTG GAGCCCGAGA ACATGGAGAG CGTCCCGCTG -ENSPTRT00000013802_pantroglodytes ....CCT... .........G GAGCCAGAGA ACATGGAGAG CGTCCCCCTG - - -ENSMUST00000091291_musmusculus GATCGTTC.. .......... ....CTCTCA CTGTCAGAGA GAA...GAG. -ENSCAFT00000026349_canisfamiliaris AACCCAA... .......... CTCCCTACCA .......... .A........ -ENSMUST00000005671_homosapiens GACCCTTCGG CCTCCTCAGC CTCCCTGCCT CTGCCTGAAA GACACTCAGG -ENSRNOT00000019267_rattusnorvegicus GACCCTTCGG CCTCCTCAGC CTCCCTGCCT CTGCCTGAAA GACACTCAGG -ENSPTRT00000013802_pantroglodytes GACCCCTCGG C......... CTCCCTGCCA CTGCCCGACA GACACTCAGG - - -ENSMUST00000091291_musmusculus GCTGGGGGCC GGGAGGGA.. .GGGTCCTCA ....CTGAGC ATCAAACGGA -ENSCAFT00000026349_canisfamiliaris .......CCC CAGAAGGG.. ...GCTC... .........C CTC....... -ENSMUST00000005671_homosapiens ACACAAGGCT GAGAATGGCC CGGGCCCTGG CGTGCTCGTT CTCCGCGCCA -ENSRNOT00000019267_rattusnorvegicus ACACAAGGCT GAGAACGG.. ....CCCTGG CGTGCTGGTT CTCCGTGCCA -ENSPTRT00000013802_pantroglodytes ACACAAGGCC GAGAACGGCC CCGGCCCTGG GGTGCTGGTC CTCCGCGCCA - - -ENSMUST00000091291_musmusculus CCTATGATGA .ACACATCCC CTATACCCAC ATGAATGGGG GCAAGAAGAA -ENSCAFT00000026349_canisfamiliaris .......... .AGACTG.C. ..ATGCCC.C A.AAATGGGG GTC....... -ENSMUST00000005671_homosapiens GTTTTGATGA GAGACAG.CC TTACGCTCAC ATGAACGGGG GACGCGCCAA -ENSRNOT00000019267_rattusnorvegicus GTTTTGATGA GAGACAG.CC TTACGCTCAC ATGAATGGGG GACGCGCCAA -ENSPTRT00000013802_pantroglodytes GCTTCGACGA GAGACAG.CC GTACGCACAC ATGAACGGGG GCCGCAAGAA - - -ENSMUST00000091291_musmusculus CGGACGTGTC CTTACCCTGC CAAGGTCAAA CCCTTCCTAA -ENSCAFT00000026349_canisfamiliaris .......... C......... ..AGGGC... .....ACTGA -ENSMUST00000005671_homosapiens CGAGAGGGCC TTGCCTCTGC CCCAGTCCTC GACCTGCTGA -ENSRNOT00000019267_rattusnorvegicus CGAGAGGGCC TTGCCTCTGC CCCAGTCCTC AA...CCTGC -ENSPTRT00000013802_pantroglodytes CGAGCGGGCC TTGCCGCTGC CCCAGTCTTC GACCTGCTGA - diff -r ae69d14b6fbf -r e3507be607eb test-data/output3.phylip --- a/test-data/output3.phylip Thu Jan 14 12:14:52 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,429 +0,0 @@ - 5 4240 -ENSMUST000 ATGGG-CTTC GGGAGAGGAT GTGAGACGAC GG-----CTG TGCCATTGCT GGTGGCCGTG -ENSCAFT000 ATGGCAGT-- -GCCCAGT-- CTGTGCCCAT GG-GTCGC-A TGC--CTGCT GGTGATCCTC -ENSMUST000 ATGAA-GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG--GGGCT CGTGTTTCTC -ENSRNOT000 ATGAA-GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG--GGGCT CGTGTTTCTC -ENSPTRT000 ATGAA-GTCT GGCTCCGGAG GAGGGTCCCC GACCTCGCTG TGG--GGGCT CCTGTTTCTC - - GCCGCGTTGC TGGTGGGCAC AGCCGGCCAC CTGTACCCTG GAGAGG--TG TG-CCCTGGT - CTCTCCTTGG GATTTGGCCT GGAC------ ------ACAC TAGAGG--TG TG-CCCCAGC - TCCGCCGCGC TC-TCTCTCT GGCCGA---C -----GAGTG GAGAAATCTG TGGGCCCGGC - TCCGCCGCGC TC-TCGCTCT GGCCGA---C -----GAGTG GAGAAATTTG TGGGCCCGGC - TCCGCCGCGC TC-TCGCTCT GGCCGA---C -----GAGTG GAGAAATCTG CGGGCCAGGC - - ATGGACATCC GGAACAACC- TGACCAGGCT ACATGAGCTG GAGAACTGCT CAGTCATTGA - CTGGACATCC GCTCAGAGGT GGCGG-AGCT GCGCCGGCTG GAGAACTGCA GCGTGGTGGA - ATTGACATCC GCAACGACTA TCAGC-AGCT GAAGCGCCTG GAAAACTGCA CGGTGATCGA - ATTGACATCC GCAACGACTA TCAGC-AGCT GAAGCGCCTG GAAAACTGCA CGGTGATCGA - ATCGACATCC GCAACGACTA TCAGC-AGCT GAAGCGCCTG GAGAACTGCA CGGTGATCGA - - GGGCCATCTG CAGATCCTCC TGATGTTCAA GACCAGACCC GAAGATTTCC GAGACCTCAG - GGGCCATCTG CAGATCCTGC TCATGTTCAC GGCCACGGGC GAGGACTTCC GCGGCCTCAG - GGGCTTCCTC CACATCCTGC TCATCTCCAA GG------CC GAGGACTACC GAAGCTACCG - GGGCTTCCTC CACATCCTGC TCATCTCCAA GG------CC GAGGACTACC GAAGCTACCG - GGGCTACCTC CACATCCTGC TCATCTCCAA GG------CC GAGGACTACC GCAGCTACCG - - TTTCCCCAAA CTCATCATGA TCACAGATTA CCTGCTTCTC TTCCGTGTCT ATGGTCTGGA - CTTCCCGCGC CTCACTCAGG TCACTGACTA CCTGCTGCTC TTCCGCGTGT ATGGCCTGGA - CTTCCCCAAG CTCACCGTCA TCACTGAGTA CTTGCTGCTC TTCCGAGTCG CTGGCCTCGA - CTTCCCCAAG CTCACGGTCA TCACCGAGTA CTTGCTGCTG TTTCGAGTGG CCGGCCTCGA - CTTCCCCAAG CTCACGGTCA TTACCGAGTA CTTGCTGCTG TTCCGAGTGG CTGGCCTCGA - - AAGTCTGAAA GACCTCTTCC CAAATCTCAC AGTCATCCGA GGCTCCCGTC TCTTCTTCAA - GAGCCTGCGG GACCTCTTCC CCAACCTCGC GGTCGTGCGT GGCGCCCGCC TCTTCCTGGG - GAGCCTGGGA GACCTCTTCC CCAACCTCAC AGTCATCCGT GGCTGGAAAC TCTTCTACAA - GAGCCTGGGA GACCTCTTCC CGAACCTCAC AGTCATCCGT GGCTGGAAAC TCTTCTACAA - GAGCCTCGGA GACCTCTTCC CCAACCTCAC GGTCATCCGC GGCTGGAAAC TCTTCTACAA - - CTATGCCCTG GTTATCTTCG AGATGGTCCA CCTGAAGGAG CTGGGGCTTT ATAACCTCAT - TTATGCGCTG GTGGTCTACG AGATGCCGCA CCTGCGGGAC GTGGGGCTGC CGGCGCTGGG - CTACGCACTG GTCATCTTCG AGATGACCAA TCTCAAGGAT ATTGGGCTTT ATAATCTGAG - TTACGCACTG GTCATCTTCG AGATGACCAA TCTCAAGGAT ATTGGGCTTT ATAATCTGAG - CTACGCCCTG GTCATCTTCG AGATGACCAA TCTCAAGGAT ATTGGGCTTT ACAACCTGAG - - GAACATCACC CGGGGCTCTG TCCGCATCGA GAAGAATAAT GAGCTCTGCT ACCTGGCCAC - GGCCGTGCTG CGTGGGGCCG TGCGGGTGGA GAAGAACCAG GAGCTCTGTC ATCTCTCCAC - GAACATTACT CGGGGGGCCA TCAGGATTGA GAAGAACGCC GACCTCTGTT ACCTCTCCAC - GAACATTACT CGGGGGGCCA TCAGGATTGA GAAAAACGCT GACCTCTGTT ACCTCTCCAC - GAACATTACT CGGGGGGCCA TCAGGATTGA GAAAAATGCT GACCTCTGTT ACCTCTCCAC - - TATCGACTGG TCCCGTATCC TGGATTCTGT GGAGGACAAC TACATTGTAC TGAACAAAGA - CATCGACTGG GGGCTGCTGC AGCCCTCGCC CAGCGCCAAC CACATCGTGG GCAACAA-GC - CATAGACTGG TCTCTCATCT TGGATGCGGT GTCCAATAAC TACATTGTGG GGAACAA-GC - CATAGACTGG TCTCTCATCT TGGATGCGGT GTCCAATAAC TACATTGTGG GGAACAA-GC - TGTGGACTGG TCCCTGATCC TGGATGCGGT GTCCAATAAC TACATTGTGG GGAATAA-GC - - TGACAACGAG GAATGTGGGG ATGTCTGTCC AGGCACCGCC AAGGGCA-AG ACCAA--CTG - TGCGT--GAG GAGTGTGCCG ACGTGTGCCC TGGTGTGCTG GGTGCCACCG GCCAGCCCTG - CCCCG--AAG GAATGTGGGG ACCTGTGTCC AGGGACATTG GAGGAGA-AG CCCAT--GTG - CCCCA--AAG GAATGTGGGG ACCTGTGTCC AGGGACCTTG GAGGAGA-AG CCCAT--GTG - CCCCA--AAG GAATGTGGGG ACCTGTGTCC AGGGACCATG GAGGAGA-AG CCGAT--GTG - - TCCTGCCACT GTCATCAATG GGCAGTTTGT GGAACGGTGC TGGACACACA GTCATTGTCA - CGCCAGGACC ACCTTCAGTG GGCACACCGA CTACAGATGC TGGACCTCCA GCCACTGCCA - TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA ATCGCTGCCA - TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA ATCGCTGCCA - TGAGAAGACC ACCATCAACA ATGAGTACAA CTACCGCTGC TGGACCACAA ACCGCTGCCA - - GAAAGTTTGC CCAACCATCT GTAAGTCACA TGGCTGCACA GCTGAAGGCC TGTGCTGCCA - GAGAGTGTGT CCCTGCCCCC ATGGG---CT GGCCTGCACA GCTGGGGGTG AGTGCTGCCA - GAAAATGTGC CCAAGTGTGT GCGGGAAGCG AGCCTGCACC GAGAACAACG AGTGCTGCCA - GAAAATGTGC CCAAGTGTGT GTGGGAAGCG AGCCTGCACC GAGAACAATG AGTGCTGCCA - GAAAATGTGC CCGAGCACGT GTGGGAAGCG GGCGTGCACC GAGAACAACG AGTGCTGCCA - - CAAAGAGTGC CTGGGCAACT GTTCGGAACC TGATGACCCC ACCAAGTGTG TGGCCTGTCG - CACTGAATGC CTGGGGGGCT GCAGCCGGCC GGAAGACCCC CGCGCCTGCG TCGCCTGTCG - CCCGGAGTGC CTGGGCAGCT GCCACACACC GGACGACAAC ACAACCTGCG TGGCCTGCAG - CCCGGAGTGC CTAGGCAGCT GCCACACACC GGACGACAAC ACAACCTGCG TGGCCTGCCG - CCCCGAGTGC CTGGGCAGCT GCAGCGCGCC TGACAACGAC ACGGCCTGTG TAGCTTGCCG - - CAACTTCTAT CTGGATGGTC AGTGTGTGGA GACCTGCCCG CCACCCTACT ATCACTTCCA - CCACCTCTAC TTCCAGGGTG CCTGCCACCG GGCCTGCCCT CCAGGCACCT ACCAGCACGA - ACACTACTAC TACAAAGGCG TGTGTGTGCC TGCCTGCCCG CCTGGCACCT ACAGGTTCGA - ACACTACTAC TACAAAGGCG TGTGCGTGCC TGCCTGCCCG CCTGGCACCT ACAGGTTCGA - CCACTACTAC TATGCCGGTG TCTGTGTGCC TGCCTGCCCG CCCAACACCT ACAGGTTTGA - - GGACTGGCGC TGTGTGAACT TCAGCTTCTG --CCAAGACC TTCA-CTTCA AATGCAGGAA - GTCCTGGCGC TGTGTCACGG CAGAGCGCTG TGCCAGCCTG CG---CTCTG TGCCCGGCCG - GGGCTGGCGC TGTGTGGATC GCGATTTCTG CGCCAACATC CCCAACGCTG AGAGCAGTGA - GGGCTGGCGC TGTGTGGACC GGGATTTCTG CGCCAACATC CCCAACGCCG AGAGCAGTGA - GGGCTGGCGC TGTGTGGACC GTGACTTCTG CGCCAACATC CTCAGCGCCG AGAGCAGCGA - - CTCTCGGAAG CCTGGCTGCC ACCAATACGT CATTCACAAC AATAAGTGCA TCCCCGAGTG - CAC------- --------CT CCATCTTTGG CATCCACGAG GGCAGCTGCC TGGCCCAGTG - CTC------- --------GG ATGGCTTCGT TATCCACGAC GATGAGTGCA TGCAGGAGTG - CTC------- --------AG ATGGCTTCGT CATCCACGAT GGCGAGTGCA TGCAGGAGTG - CTC------- --------CG AGGGGTTTGT GATCCACGAC GGCGAGTGCA TGCAGGAGTG - - CCCGTCTGGC TATACCATGA ATTCCAGC-- -AACTTGATG TGCACCCCAT GTCTGGGACC - CCCTCCGGGC TTCACCCGCA ACGGCAGC-- -AGCATGTTC TGCCACAAGT GTGAGGGGCT - TCCCTCAGGC TTCATCCGCA ACAGCACCCA GAGCATGTAC TGTATCCCCT GCGAAGGCCC - TCCATCAGGC TTCATCCGCA ACAGCACCCA GAGCATGTAC TGTATCCCCT GTGAAGGCCC - CCCCTCGGGC TTCATCCGCA ACGGCAGCCA GAGCATGTAC TGCATCCCTT GTGAAGGTCC - - CTGCCCTAAG GTCTGCCAA- ATCCTC-GAA GGTG-AGAAG ACCATTGATT CTGTGACATC - GTGCCCCAAA GAGTGCA--- AGGT------ GGGTACCAAG ACCATCGACT CCACGCAGGC - CTGCCCCAAA GTCTGCGGCG ATGAAGAGAA GAAAACGAAA ACCATCGATT CGGTGACTTC - CTGCCCCAAG GTCTGCGGCG ATGAAGAAAA GAAAACGAAA ACCATCGATT CTGTGACGTC - TTGCCCGAAG GTCTGTG--- AGGAAGAAAA GAAAACAAAG ACCATTGATT CTGTTACTTC - - TGCCCAGGAG CTCCGAGGCT GCACTGTGAT CAACGGTAGC CTGATCATCA ACATCCGAGG - GGCACAGGAC CTGGCGGGCT GCACCCACGT GGAGGGGAGC CTCATCATCA ACCTCCGCCA - TGCTCAAATG CTCCAAGGAT GCACCATCCT GAAGGGCAAT CTGCTTATTA ACATCCGGAG - TGCCCAGATG CTCCAAGGGT GCACCATTTT GAAGGGCAAT CTGCTTATTA ACATCCGGCG - TGCTCAGATG CTCCAAGGAT GCACCATCTT CAAGGGCAAT TTGCTCATTA ACATCCGACG - - GGGCAACAAC CTGGCAGCTG AGCTGGAGGC TAACCTTGGC CTCATTGAAG AAATTTCGGG - GGGCTACAAC CTAGAGCTGG AGCTGCAACA GAGCCTGGGG CTGATAGAGA CCATCACTGG - AGGCAATAAC ATTGCCTCGG AGTTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACCGG - AGGCAATAAC ATTGCCTCGG AATTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACTGG - GGGGAATAAC ATTGCTTCAG AGCTGGAGAA CTTCATGGGG CTCATCGAGG TGGTGACGGG - - ATTTCTAAAG ATCCGCCGCT CCTATGCTCT GGTATCACTT TCTTTCTTCA GGAAGCTACA - CTTCCTCAAG ATCAAGCACT CCTTTGCCCT CGTGTCCCTG GGCTTTTTCA AGAACCTCAA - CTACGTGAAG ATCCGCCATT CTCATGCCTT GGTCTCCTTG TCCTTCCTGA AGAACCTTCG - CTACGTGAAG ATCCGCCATT CCCATGCCTT GGTCTCCTTG TCCTTCCTGA AGAACCTTCG - CTACGTGAAG ATCCGCCATT CTCATGCCTT GGTCTCCTTG TCCTTCCTAA AAAACCTTCG - - TCTGATTCGA GGAGAGACCT TGGAAATTGG GAACTATTCT TTTTATGCCT TGGACAACCA - ACTCATCCGA GGGGACGCCA TGGTGGATGG GAACTACACC CTGTATGTGC TGGACAACCA - TCTCATCTTA GGAGAGGAGC AGCTGGAAGG GAACTACTCC TTCTATGTCC TAGACAACCA - TCTCATCTTA GGAGAGGAGC AGCTAGAAGG GAACTACTCC TTCTATGTCC TGGACAACCA - CCTCATCTTA GGAGAGGAGC AGCTAGAAGG GAATTACTCC TTCTACGTCC TCGACAACCA - - GAACCTGAGG CAACTCTGGG ACTGGAG-CA AACACAACCT CACCATCACT CAGGGCAAGC - GAACCTACAG CAGCTGGGGG CCTGGGTGGC TGCGG-GGCT CACCATTCCC GTGGGCAAGA - GAACTTGCAG CAGCTGTGGG ACTGGAA-CC ACCGGAACCT GACCGTCAGG TCCGGAAAGA - GAACTTGCAG CAGCTGTGGG ACTGGAA-CC ACCGGAACCT GACCGTCAGG TCAGGGAAAA - GAACTTGCAG CAACTATGGG ACTGGGA-CC ACCGCAACCT GACCATCAAA GCAGGGAAAA - - TCTTCTTCCA TTACAACCCG AAACTCTGCT TGTCTGAAAT TCACAAGATG GAAGAAGTCT - TATACTTCGC TTTCAACCCT CGCCTCTGCT TGGAGCACAT CTACCGCCTG GAAGAGGTGA - TGTACTTTGC TTTCAATCCC AAGCTGTGTG TCTCCGAAAT TTACCGCATG GAGGAAGTGA - TGTACTTCGC TTTCAATCCC AAGCTGTGTG TCTCTGAAAT TTACCGGATG GAGGAGGTGA - TGTACTTTGC TTTCAATCCC AAATTATGTG TTTCCGAAAT TTACCGCATG GAGGAAGTGA - - CCGGAACTAA GGGCCGTCAG GAGAGGAACG ACATTGCCCT GAAGACCAAT GGGGACCAGG - CCGGCACGCG GGGACGGCAA AACAAGGCTG AGATCAACCC CCGCACCAAC GGAGACCGCG - CCGGAACCAA GGGACGCCAG AGCAAAGGGG ACATAAACAC CAGGAACAAC GGAGAGCGAG - CAGGAACAAA GGGACGGCAG AGCAAAGGAG ACATAAACAC CAGGAACAAC GGAGAGCGAG - CGGGGACTAA AGGGCGCCAA AGCAAAGGGG ACATAAACAC CAGGAACAAC GGGGAGAGAG - - CATCGTGTGA AAATGAATTG CTTAAATTTT CTTTCATTCG GACATCTTTT GACAAGATCC - CCGCCTGCCA AACTCGCACC CTGCGCTTCG TGTCCAACGT GACGCAAGCT GACAGCATCT - CTTCCTGTGA AAGTGATGTT CTCCGTTTCA CCTCCACCAC GACCTGGAAG AACCGAATCA - CTTCCTGTGA AAGTGATGTT CTCCGTTTCA CCTCCACCAC CACCTGGAAG AACCGCATCA - CCTCCTGTGA AAGTGACGTC CTGCATTTCA CCTCCACCAC CACGTCGAAG AATCGCATCA - - TGTTGAGGTG GGAACCCTAC TGGCCCCCCG ACTTCCGAGA TCTCCTGGGA TTCATGTTGT - TGCTGCGCTG GGAGCGCTAC GAGCCGCTGG AGGCTCGGGA CCTGCTCAGC TTCATCGTGT - TCATAACGTG GCACCGGTAC CGGCCGCCGG ACTACCGGGA TCTCATCAGC TTCACAGTTT - TCATAACGTG GCACCGGTAC CGGCCGCCGG ACTACCGGGA TCTCATCAGT TTCACAGTCT - TCATAACCTG GCACCGGTAC CGGCCCCCTG ACTACAGGGA TCTCATCAGC TTCACCGTTT - - TCTACAAAGA GGCCCCTTAT CAGAATGTGA CAGAGTTTGA TGGGCAGGAT GCTTGTGGCT - ACTACAAGGA GTCCCCATTC CAGAATGCCA CAGAGCACAC AGGTCCAGAT GCCTGTGGAA - ACTACAAGGA GGCACCATTT AAAAACGTTA CGGAATATGA CGGGCAGGAT GCCTGTGGCT - ACTACAAGGA GGCACCCTTT AAAAACGTCA CGGAATACGA CGGGCAGGAT GCCTGTGGCT - ACTACAAGGA AGCACCCTTT AAGAATGTCA CGGAGTATGA TGGGCAGGAC GCCTGCGGCT - - CCAACAGCTG GACTGTGGTG GATATTGACC CGCCCCAGAG GTCCAACGAC CCCAAGTCTC - CCCAGAGCTG GAACCTGCTG GATGTGGAGC TGCCCTTAAG ---CCGCACC C--------A - CCAACAGCTG GAACATGGTG GATGTAGACC TGCCTCCGAA ---CAAGGAG G--------G - CCAACAGCTG GAACATGGTG GACGTGGACC TGCCTCCGAA ---CAAGGAG G--------G - CCAACAGCTG GAACATGGTG GACGTGGACC TCCCGCCCAA ---CAAGGAC G--------T - - AGACCCCAAG CCACCCTGGG TGGCTGAT-G CGGGGCCTCA AACCCTGGAC CCAATACGCC - AGAACC---- -----CGGGG T-AACTCTAG CA-CCCCTCA AGCCCTGGAC ACAATATGCA - CGAGCC---- -----TGGCA T-TTTACT-G CATGGGCTGA AGCCCTGGAC CCAGTATGCT - GGAGCC---- -----TGGCA T-TTTGCT-G CATGGGCTGA AGCCCTGGAC CCAGTATGCA - GGAGCC---- -----CGGCA T-CTTACT-A CATGGGCTGA AGCCCTGGAC TCAGTACGCC - - ATCTTTGTGA AGACCTTGG- --TTACCTTC TCTGATGAAC GGC-GGACCT ATGGAGCCAA - GTGTTTGTAC GGGCCATCAC ACTGACCACT G-CTGAGGAC AGCCCCCACC AAGGAGCCCA - GTCTATGTCA AGGCTGTGAC CCTCACCATG G-TGGAAAAC GACCATATCC GTGGGGCCAA - GTCTATGTCA AGGCTGTGAC CCTCACCATG G-TGGAAAAC GACCACATCC GTGGGGCCAA - GTTTACGTCA AGGCTGTGAC CCTCACCATG G-TGGAGAAT GACCATATCC GTGGGGCCAA - - AAGTGATATC ATCTATGTGC AAACAGATGC CACTAATCCT TCTGTCCCCC TGGATCCCAT - GAGCCCCATC GTCTACCTCC GAACCCTGCC TGCGGCGCCC ACTGTGCCCC AGGACGTCAT - AAGTGAAATC TTGTACATTC GCACCAATGC TTCAGTCCCT TCCATTCCCC TAGATGTCCT - AAGTGAAATC TTGTACATTC GCACCAACGC TTCAGTTCCT TCCATTCCTC TAGATGTCCT - GAGTGAGATC TTGTACATTC GCACCAATGC TTCAGTTCCT TCCATTCCCT TGGACGTTCT - - ATCAGTTTCT AATTCCTCAT CTCAGATTAT CTTAAAGTGG AAGCCCCCCT CTGACCCCAA - CTCCACGTCC AATTCCTCGT CCCACCTGCT CGTGCGCTGG AAGCCACCGA TTCAGCGCAA - CTCAGCATCA AACTCTTCCT CTCAGCTGAT TGTGAAGTGG AATCCTCCAA CTCTGCCCAA - CTCGGCATCA AACTCCTCCT CTCAGCTGAT CGTGAAGTGG AACCCCCCAA CTCTGCCCAA - TTCAGCATCG AACTCCTCTT CTCAGTTAAT CGTGAAGTGG AACCCTCCCT CTCTGCCCAA - - TGGCAACATC ACACACTACC TGGTGTACTG GGAGAGGCAA GCAGAGGACA GCGAGCTGTT - CGGGAACATC ACCTACTACC TGGTGCTGTG GCAGCGTCTG GCGGAGGACG GCGACCTCTA - TGGTAACTTG AGTTACTACA TTGTGAGGTG GCAGCGGCAG CCCCAGGATG GTTACCTGTA - TGGTAACTTG AGTTACTACA TTGTGAGGTG GCAGCGGCAG CCGCAGGATG GCTATCTGTT - CGGCAACCTG AGTTACTACA TTGTGCGCTG GCAGCGGCAG CCTCAGGACG GCTACCTTTA - - TGAGCTGGAT TATTGTCTCA AAGGGCTGA- AGCTCCCTTC ACGGACCTGG TC---CCCAC - TCTCAACGAC TACTGCCACC GCGGCCTGCG GCTGCCCACC AGCAACAACG AC---CCGC- - CCGGCACAAC TACTGCTCCA AAGA-CAA-- AATACCCATC AGAAAGTACG CCGATGGTA- - CCGGCACAAC TACTGCTCCA AAGA-CAA-- AATACCCATC AGAAAGTACG CCGATGGTA- - CCGGCACAAT TACTGCTCCA AAGA-CAA-- AATCCCCATC AGGAAGTATG CCGACGGCA- - - CCTTTGAGTC TGATGAT-T- -CTCAGAAGC ACAA-TCAGA -GT-GAGTA- TGACGACTCG - GCTTCGACCG CGAGGA---- -CGGTGAACT CGAAG-CCGA GATGGAGCC- -GG-GCTGC- - CCATCGACGT GGAGGAGGTG ACGGAAAATC CCAAGACAGA AGT-GTGTGG TGGTGATAA- - CCATCGATGT GGAGGAGGTG ACAGAAAATC CCAAGACAGA AGT-GTGCGG TGGTGATAA- - CCATCGACAT TGAGGAGGTC ACAGAGAACC CCAAGACTGA GGT-GTGTGG TGGGGAGAA- - - GCCAGTGAGT GC-TGCTCAT GCCC-TAAGA CTGACTCTCA GATCCTGAAG GAGCTGGAGG - ---TGCCCTT GCCAGCACCC ACCGCCTGGG CAG--GTCCT GCCGCCGCTG GAGGCGCAAG - --AGGGCCAT GC-TGCGCTT GCCC-TAAAA CTGAAGCTGA GAAGCAGGCT GAGAAGGAGG - --AGGGCCGT GC-TGTGCCT GTCC-TAAAA CCGAAGCTGA GAAGCAGGCT GAGAAGGAGG - --AGGGCCTT GC-TGCGCCT GCCC-CAAAA CTGAAGCCGA GAAGCAGGCC GAGAAGGAGG - - AGTCTTCATT CAGGAAGACC TTCGAGGATT ACCTGCACAA CGTGGTTTTT GTCCCCAGGC - AGGCCTCGTT CCAGAAGAAG TTCGAAAACT TCCTGCACAA CGCCATCACC ATCCCCAAGT - AGGCTGAGTA CCGTAAAGTC TTTGAGAATT TCCTTCACAA TTCCATCTTT GTGCCCAGGC - AGGCTGAGTA CCGTAAAGTC TTTGAGAATT TCCTTCACAA CTCCATCTTT GTGCCCAGAC - AGGCTGAATA CCGCAAAGTC TTTGAGAATT TCCTGCACAA CTCCATCTTC GTGCCCAGAC - - CATCCCGAAA GCGAAGATCC CTTGAAGAGG TGGGGAATGT GACA---GCC ACCACACTCA - CCCCCTGGAA GGTGACGTCC GTCA-ATAAG AGCCCTCAAA GA-------C ATGCGG-GGA - CCGAAAGGAG GCGGAGAGAC GTCATGCAAG TGGCCAACAC GACCATGTCC AGCCGAAGCA - CTGAGAGGAG GCGGAGAGAT GTCCTGCAGG TGGCTAACAC CACCATGTCC AGCCGAAGCA - CTGAAAGGAA GCGGAGAGAT GTCATGCAAG TGGCCAACAC CACCATGTCC AGCCGAAGCA - - -CACTTCCAG ATTTCCCCAA CGT-CTCCTC TACCATTGTG CCC-ACAAGT CAG-G-AGGA - GGCACCGCCG GGC-GGCCGG GGCGCTCC-- -GGCTTGGGG GC--AACAGC TCG-----GA - GGAACACCAC GGT-AGCTGA CAC-CTACAA TATCACAGAC CCGGAGGAGT TCGAGACAGA - GGAACACCAC GGT-AGCTGA CAC-CTACAA TATCACAGAC CCGGAAGAGT TCGAGACAGA - GGAACACCAC GGC-CGCAGA CAC-CTACAA CATCACCGAC CCGGAAGAGC TGGAGACAGA - - GCACAGGCCA TTTGAGA--- AAGTGGTGAA CAAGGAGTCA CTTGTCATCT CTGGCCTGAG - TTTCGAGATC CAGGAGGACA AAGTGC---C CCGGGAGCGA GCAGTGTTGA GTGGTCTGCG - GTACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGG ACTGTCATCT CCAACCTCCG - ATACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGG ACTGTCATTT CCAACCTCCG - GTACCCTTTC TTTGAGAGCA GAGTGGATAA CAAGGAGAGA ACTGTGATTT CTAACCTTCG - - ACACTTCACT GGGTACCGCA TTGAGCTGCA GGCATGCAAT CAAGATTCCC CAGAT-GAGA - CCACTTTACG GAATATCGTA TCGACATCCA CGCCTGCAAC CACGCGGCT- CACACCGTGG - GCCTTTCACT CTGTACCGCA TCGATATCCA CAGCTGCAAC CACGAGGCT- GAGAAGCTGG - GCCTTTCACT CTGTACCGTA TCGATATCCA CAGCTGCAAC CACGAGGCT- GAGAAGCTGG - GCCTTTCACA TTGTACCGCA TCGATATCCA CAGCTGCAAC CACGAGGCT- GAGAAGCTGG - - GGTGCAGTGT GGCTGCCTAC GTCAGTGCCC GGACCATGCC TGAAGCTAAG GCAGATGACA - GCTGCAGCGC GGCCACGTTC GTCTTCGCGC GCACCATGCC GCACAGAGAA GCTGATGGCA - GCTGCAGCGC CTCCAACTTC GTCTTTGCGA GAACCATGCC AGCAGAAGGA GCAGATGATA - GCTGCAGCGC CTCCAACTTT GTCTTTGCAA GAACCATGCC AGCAGAAGGA GCAGATGACA - GCTGCAGCGC CTCCAACTTT GTCTTTGCAA GGACTATGCC CGCAGAAGGA GCAGATGACA - - TCGTTGGCCC TGTGACTCAT GAA---ATCT TTGAGAACAA TGTTGTACAC TTAATGTGGC - TCCCAGGGAA GGTGGCCTGG GAGGCAGCCA GCAAAAGC-- -AGTGTCCTC CTGCGCTGGC - TCCCTGGTCC GGTGACCTGG GAGCCAAGAC CCGAAAAC-- -TCCATCTTT TTAAAGTGGC - TTCCTGGCCC AGTGACCTGG GAGCCAAGAC CTGAAAAC-- -TCCATCTTT TTAAAGTGGC - TTCCTGGGCC AGTGACCTGG GAGCCAAGGC CTGAAAAC-- -TCCATCTTT TTAAAGTGGC - - AAGAGCCAAA GGAACCTAAT GGTCTGATTG TGCTATATGA AGTGAGCTAT CGCCGATATG - TGGAGCCACC TGACCCCAAC GGACTCATCC TCAAGTATGA AATCAAGTAC CGCCGCTTGG - CAGAACCCGA GAACCCCAAC GGATTGATCC TAATGTATGA AATTAAATAC GGGTCGCAA- - CAGAACCCGA GAACCCCAAC GGATTGATTC TAATGTATGA AATAAAATAC GGATCGCAA- - CGGAACCTGA GAATCCCAAT GGATTGATTC TAATGTATGA AATAAAATAC GGATCACAA- - - GTGATGAGGA G-CTGCACCT CTGTGTCTCC CGGAAGCATT TTGCCCTGGA GCGGGGCTGC - GAGAGGAGGC CACAGT-GCT ATGTGTGTCC CGCCTACGAT ATGCCAAATT TGGGGGTGTC - --GTCGAGGA T-CAGCGGGA ATGTGTGTCC AGACAGGAGT ACAGGAAGTA CGGAGGGGCC - --GTCGAGGA T-CAGCGGGA ATGTGTGTCC AGACAGGAGT ACAGGAAGTA TGGAGGGGCC - --GTTGAGGA T-CAGCGAGA ATGTGTGTCC AGACAGGAAT ACAGGAAGTA TGGAGGGGCC - - AGGCTGCGAG GGCTCTCCCC AGGAAACTAC AGTGTTCGAG TCCGGGCTAC CTCTCTGGCA - CAGCTGGCCC TGCTGCCCCC TGGAAACTAC TCCGCCAGAG TTCGGGCAAC CTCGCTGGCT - AAACTCAACC GTCTAAACCC AGGGAACTAT ACAGCCCGGA TTCAGGCTAC CTCCCTCTCT - AAACTTAACC GTCTAAACCC AGGGAACTAT ACGGCCCGGA TTCAGGCTAC CTCCCTCTCT - AAGCTAAACC GGCTAAACCC GGGGAACTAC ACAGCCCGGA TTCAGGCCAC ATCTCTCTCT - - GGAAATGGCT CCTGGACAGA ACCCACCTAT TTTTATGTGA CTGAT-TATT TAGATGTCCC - GGCAACGGCT CCTGGACAGA AAGTATCGCT TTCTACGTCC CAGGCCCA-- --GAGG---- - GGGAATGGGT CATGGACAGA TCCTGTGTTC TTCTATGTCC CCGCC-AA-- --AACGACGT - GGGAATGGGT CGTGGACAGA TCCTGTGTTC TTCTATGTCC CAGCC-AA-- --AACAACGT - GGGAATGGGT CGTGGACAGA TCCTGTGTTC TTCTATGTCC AGGCC-AA-- --AACAGGAT - - ATCAAA-TAT TGCCAAAATT ATCATTGGAC CCCTCATCTT TGTCTTCCTC TTCAGTGTTG - AGGAAGACTC CGGGGGGCTG CACGTCCTTC TCACTG---T CACCCCCGTG GGGCTCAT-- - ATGAGAACTT CATGCATCTG ATCATTGCTC TGCCGG---T TGCCATCCTG CTGATCGTTG - ATGAGAATTT CATGCATCTG ATCATTGCTC TGCCGG---T TGCCATCCTG CTGATTGTGG - ATGAAAACTT CATCCATCTG ATCATCGCTC TGCCCG---T CGCTGTCCTG TTGATCGTGG - - --TGATTGGA -AGTAT---T TATCTATTTC TGAGAAAGAG G-----CAGC CGGATGGGCC - ----GCTGTT CATCATTCTT GCCGCCCTCG GTTTCTTC-- ----TACGGC AGGAAGAG-A - GGGGGCTGGT TATCATGCTG TATGTCTTCC ATAGAAAGAG AAATAACAGC AGGTTGGG-C - GGGGCCTGGT AATCATGCTG TATGTCTTCC ATAGAAAGAG G-------G- TGTCTGGGCC - GAGGGTTGGT GATTATGCTG TACGTCTTCC ATAGAAAGAG AAATAACAGC AGGCTGGG-G - - AATGGGACCA CTGTATGCAT CTTCAAACCC TGAGTACCT- CAGTGCCAGT GATGTGTTTC - AACAG-CACC CTCTATGCCT CAGTGAATCC GGAGTACTT- CAGCGCCTCT GAT------- - AATGG-AGTG CTGTATGCTT CTGTGAACCC CGAGTATTT- CAGCGCAGCT GAT------- - AGCAG-AAGG CAGTAG---- TTGGAAA--- GGGCCATTTC CATCCTGTCT GTT------- - AATGG-AGTG CTGTATGCCT CTGTGAACCC GGAGTACTT- CAGCGCTGCT GAT------- - - CATCTTCTGT GTACGTGCCG GACGAGTGGG AGGTGCCTCG AGAGAAGATC ACCCTTCTTC - --------AT GTACATCCCT GATGAGTGGG AGGTGCCTCG GGAGCAGATC TCCATAATCC - --------GT GTACGTGCCT GATGAATGGG AGGTAGCTCG AGAGAAGATC ACCATGAACC - ---C-CTAGT GTACGTGCCT GATGAATGGG AGGTAGCTCG GGAGAAGATC ACCATGAACC - --------GT GTACGTTCCC GATGAGTGGG AGGTGGCTCG GGAGAAGATC ACCATGAGCC - - GAGAGCTGGG GCAGGGATCC TTTGGTATGG TGTATGAAGG CAATGC-CAA GGATA--TCA - GAGAGCTGGG CCAGGGCTCC TTTGGGATGG TATATGAAGG CCTGGCACAA GGACTAGAGG - GGGAGCTCGG ACAAGGGTCC TTTGGGATGG TCTATGAAGG AGTGGC-CAA GGGTG--TGG - GGGAGCTCGG ACAAGGGTCC TTCGGGATGG TCTATGAAGG AGTGGC-CAA GGGCG--TGG - GGGAACTTGG GCAGGGGTCC TTTGGGATGG TCTATGAAGG AGTTGC-CAA GGGTG--TGG - - TCAAGGGTGA GGCAGAGACC CGTGTTGCGG TTAAGACTGT CAATGAGTCA GCCAGTCTTC - CTGGAGAGGA GTCC-ACACC C--GTGGCCC TGAAGACAGT GAATGAGTTG GCCAGCCCAC - TCAAGGATGA ACCCGAAACC AGAGTGGCCA TCAAGACGGT AAACGAGGCT GCAAGTATGC - TCAAGGACGA GCCTGAAACC AGAGTGGCCA TCAAGACAGT GAATGAGGCT GCAAGTATGC - TGAAAGATGA ACCTGAAACC AGAGTGGCCA TTAAAACAGT GAACGAGGCC GCAAGCATGC - - GAGAACGGAT CGAGTTCCTC AATGAGGCAT CAGTCATGAA GGGATTCACC TGCCATCATG - GAGAACGCAT TGAGTTCCTC AAGGAAGCTT CTGTCATGAA GGCATTCAAG TGTCACCATG - GTGAAAGAAT CGAGTTTCTC AACGAGGCCT CGGTGATGAA GGAGTTCAAT TGTCACCATG - GTGAGAGAAT TGAGTTTCTC AACGAGGCCT CAGTGATGAA GGAGTTCAAC TGTCACCATG - GTGAAAGGAT TGAGTTTCTC AACGAAGCTT CTGTGATGAA GGAGTTCAAT TGTCACCATG - - TGGTCCGCCT TCTTGGGGTG GTATCCAAAG GACAGCCAAC GCTGGTAGTG ATGGAATTGA - TGGTACGTCT CCTGGGTGTT GTGTCTCAAG GCCAGCCAAC TCTGGTCATC ATGGAGTTAA - TGGTCCGGTT GCTGGGTGTG GTATCCCAAG GCCAGCCCAC CCTGGTCATC ATGGAACTAA - TGGTCCGGTT GCTGGGTGTA GTATCCCAAG GCCAGCCCAC CCTGGTCATC ATGGAACTAA - TGGTGCGATT GCTGGGTGTG GTGTCCCAAG GCCAGCCAAC ACTGGTCATC ATGGAACTGA - - TGGCTCATGG AGACCTGAAA AGTCACCTCC GTTCTCTGAG GCCAGATGCT GA---GAATA - TGACTCGTGG GGACCTCAAG AGCCATCTTC GATCTCTGCG GCCTGAGGCA GA---GAACA - TGACACGCGG TGATCTCAAA AGTTATCTCC GGTCTCTGAG GCCAGAAGTG GAGCAGAATA - TGACACGTGG CGATCTCAAA AGTTATCTCC GGTCTCTAAG GCCAGAGGTG GA---GAATA - TGACACGGGG CGATCTCAAA AGTTATCTCC GGTCTCTGAG GCCAGAAATG GA---GAATA - - ACCCAGGCCG CCCTCCCCCT ACCTTGCAAG AAATGATTCA GATGACAGCA GAAATTGCTG - ACCCTGGGCT CCCACGGCCA GCACTGGGAG ATATGATCCA GATGGCTGGT GAGATTGCAG - ATCTAGTCCT CATTCCTCCG AGCTTAAGCA AGATGATCCA GATGGCTGGA GAGATTGCAG - ATCTAGTCCT GATTCCTCCG AGCTTAAGCA AGATGATCCA GATGGCTGGA GAGATTGCAG - ATCCAGTCCT AGCACCTCCA AGCCTGAGCA AGATGATTCA GATGGCCGGA GAGATTGCAG - - ATGGCATGGC ATACTTGAAC GCCAAGAAGT TTGTGCACCG GGACCTGGCA GCTCGAAACT - ATGGCATGGC TTACCTCGCT GCCAACAAGT TTGTGCATCG AGACCTGGCA GCCAGAAACT - ATGGCATGGC CTACCTCAAT GCCAACAAGT TCGTCCACAG AGACCTTGCT GCTAGGAACT - ATGGCATGGC CTACCTCAAT GCCAACAAGT TCGTCCACAG AGACCTGGCT GCTCGGAACT - ACGGCATGGC ATACCTCAAC GCCAATAAGT TCGTCCACAG AGACCTTGCT GCCCGGAATT - - GCATGGTTGC CCATGATTTT ACTGTCAAAA TTGGAGACTT TGGAATGACA AGGGACATCT - GCATGGTGTC CCAGGACTTC ACCGTCAAGA TTGGGGACTT CGGGATGACT CGAGACGTGT - GCATGGTAGC CGAAGATTTC ACAGTCAAAA TTGGAGATTT CGGTATGACA CGAGACATCT - GCATGGTAGC TGAAGATTTC ACAGTCAAAA TTGGAGATTT TGGTATGACA CGAGACATCT - GCATGGTAGC CGAAGATTTC ACAGTCAAAA TCGGAGATTT TGGTATGACG CGAGATATCT - - ACGAGACAGA TTACTATCGG AAAGGGGGCA AGGGACTGCT TCCTGTGAGG TGGATGTCAC - ACGAGACAGA CTATTACCGC AAGGGCGGGA AAGGGCTGCT GCCCGTGCGC TGGATGGCCC - ACGAGACGGA CTACTACCGG AAAGGCGGGA AGGGGTTGCT GCCTGTGCGC TGGATGTCTC - ACGAGACGGA CTACTACCGG AAAGGCGGGA AGGGCTTGCT GCCTGTGCGC TGGATGTCTC - ATGAGACAGA CTATTACCGG AAAGGAGGGA AAGGGCTGCT GCCCGTGCGC TGGATGTCTC - - CTGAGTCCCT GAAGGATGGA GTCTTTACTG CTTCTTCTGA TATGTGGTCC TTTGGGGTGG - CCGAGTCCCT CAAAGATGGA ATCTTCACCA CACATTCGGA TGTTTGGTCC TTCGGGGTGG - CCGAGTCCCT CAAGGATGGT GTCTTCACTA CTCATTCTGA TGTCTGGTCC TTCGGGGTCG - CCGAGTCCCT CAAGGATGGC GTCTTCACCA CTCATTCCGA TGTCTGGTCC TTTGGGGTCG - CCGAGTCCCT CAAGGATGGA GTCTTCACCA CTTACTCGGA CGTCTGGTCC TTCGGGGTCG - - TCCTTTGGGA AATCACTAGC CTGGCTGAGC AACCTTATCA AGGCCTGTCT AATGAACAGG - TGCTCTGGGA GATCGTGACC CTAGCTGAAC AGCCCTACCA GGGTTTATCC AACGAGCAGG - TCCTCTGGGA GATCGCCACG CTGGCTGAGC AGCCCTACCA GGGCTTGTCC AACGAGCAAG - TCCTCTGGGA GATCGCCACT CTGGCTGAGC AGCCGTACCA GGGCCTGTCC AACGAGCAAG - TCCTCTGGGA GATCGCCACA CTGGCCGAGC AGCCCTACCA GGGCTTGTCC AACGAGCAAG - - TGTTGAAGTT TGTCATGGAT GGAGGCTATC TGGATCCCCC TGATAACTGT CCAGAGAGAC - TGCTCAAGTT TGTCATGGAT GGTGGGGTCC TGGAGGAGCT GGAGAGCTGT CCCCTTCAGC - TTCTTCGTTT CGTCATGGAG GGTGGCCTTC TGGACAAGCC GGACAACTGC CCTGATATGC - TTCTTCGTTT CGTCATGGAG GGCGGCCTTC TGGACAAGCC GGATAACTGC CCCGATATGC - TCCTTCGCTT CGTCATGGAG GGCGGCCTTC TGGACAAGCC AGACAACTGT CCCGACATGC - - TCACTGACCT GATGCGCATG TGCTGGCAGT TCAACCCCAA GATGAGGCCA ACCTTCCTGG - TGCAAGAACT GATGAGCCGC TGCTGGCAGC AGAACCCACG CCTGCGGCCC ACCTTCACCC - TGTTTGAACT TATGCGCATG TGCTGGCAGT ATAACCCCAA GATGCGGCCC TCCTTCCTGG - TGTTTGAACT TATGCGCATG TGCTGGCAGT ACAACCCCAA GATGCGGCCC TCCTTCCTGG - TGTTTGAACT GATGCGCATG TGCTGGCAGT ATAACCCCAA GATGAGGCCT TCCTTCCTGG - - AAATCGTCAA CCTGCTCAAG GATGACCTCC ACCCCAGCTT TCCAGAAGTT TCCTTCTTCT - ACATCCTGGA CAGCATTCGG GGGGAACTGC GGCCCTCTTT CCGCCTCTTT TCCTTCTATT - AGATCATCGG CAGCATCAAG GATGAGATGG AGCCCAGCTT CCAGGAGGTC TCCTTCTACT - AGATCATCGG AAGCATCAAG GATGAGATGG AGCCCAGTTT CCAGGAGGTC TCCTTCTACT - AGATCATCAG CAGCATCAAA GAGGAGATGG AGCCTGGCTT CCGGGAGGTC TCCTTCTACT - - ACAGCGAGGA GAACAAGGCT CCTGAGAGTG AGGAGCTGGA ----GAT--- ---------G - ACAGCCCAGA GTG------- ------CCAG GGGAGCCAGG GGGCCCT--- ---------G - ACAGCGAGGA GAACAAGCCT CCCGAGCCAG AGGAGCTGGA ----GAT--- ---------G - ACAGCGAGGA GAACAAGCCT CCAGAGCCGG AGGAGCTGGA ----GATGGA GCTGGAGCTG - ACAGCGAGGA GAACAAGCTG CCCGAGCCGG AGGAGCTGGA ----CCT--- ---------G - - GAGTTTGAAG ACATGGAGAA TGTCCCGTTG GATCGTTC-- ---------- ----CTCTCA - CTGCCTAATG CC-------- ---------A AACCCAA--- ---------- CTCCCTACCA - GAGCCTGAGA ACATGGAGAG CGTCCCACTG GACCCTTCGG CCTCCTCAGC CTCCCTGCCT - GAGCCCGAGA ACATGGAGAG CGTCCCGCTG GACCCTTCGG CCTCCTCAGC CTCCCTGCCT - GAGCCAGAGA ACATGGAGAG CGTCCCCCTG GACCCCTCGG C--------- CTCCCTGCCA - - CTGTCAGAGA GAA---GAG- GCTGGGGGCC GGGAGGGA-- -GGGTCCTCA ----CTGAGC - ---------- -A-------- -------CCC CAGAAGGG-- ---GCTC--- ---------C - CTGCCTGAAA GACACTCAGG ACACAAGGCT GAGAATGGCC CGGGCCCTGG CGTGCTCGTT - CTGCCTGAAA GACACTCAGG ACACAAGGCT GAGAACGG-- ----CCCTGG CGTGCTGGTT - CTGCCCGACA GACACTCAGG ACACAAGGCC GAGAACGGCC CCGGCCCTGG GGTGCTGGTC - - ATCAAACGGA CCTATGATGA -ACACATCCC CTATACCCAC ATGAATGGGG GCAAGAAGAA - CTC------- ---------- -AGACTG-C- --ATGCCC-C A-AAATGGGG GTC------- - CTCCGCGCCA GTTTTGATGA GAGACAG-CC TTACGCTCAC ATGAACGGGG GACGCGCCAA - CTCCGTGCCA GTTTTGATGA GAGACAG-CC TTACGCTCAC ATGAATGGGG GACGCGCCAA - CTCCGCGCCA GCTTCGACGA GAGACAG-CC GTACGCACAC ATGAACGGGG GCCGCAAGAA - - CGGACGTGTC CTTACCCTGC CAAGGTCAAA CCCTTCCTAA - ---------- C--------- --AGGGC--- -----ACTGA - CGAGAGGGCC TTGCCTCTGC CCCAGTCCTC GACCTGCTGA - CGAGAGGGCC TTGCCTCTGC CCCAGTCCTC AA---CCTGC - CGAGCGGGCC TTGCCGCTGC CCCAGTCTTC GACCTGCTGA - - - diff -r ae69d14b6fbf -r e3507be607eb test-data/output3.pir_aln --- a/test-data/output3.pir_aln Thu Jan 14 12:14:52 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,440 +0,0 @@ ->DL;ENSMUST00000091291_musmusculus - -ATGGG-CTTCGGGAGAGGATGTGAGACGACGG-----CTGTGCCATTGCT -GGTGGCCGTGGCCGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTG -GAGAGG--TGTG-CCCTGGTATGGACATCCGGAACAACC-TGACCAGGCT -ACATGAGCTGGAGAACTGCTCAGTCATTGAGGGCCATCTGCAGATCCTCC -TGATGTTCAAGACCAGACCCGAAGATTTCCGAGACCTCAGTTTCCCCAAA -CTCATCATGATCACAGATTACCTGCTTCTCTTCCGTGTCTATGGTCTGGA -AAGTCTGAAAGACCTCTTCCCAAATCTCACAGTCATCCGAGGCTCCCGTC -TCTTCTTCAACTATGCCCTGGTTATCTTCGAGATGGTCCACCTGAAGGAG -CTGGGGCTTTATAACCTCATGAACATCACCCGGGGCTCTGTCCGCATCGA -GAAGAATAATGAGCTCTGCTACCTGGCCACTATCGACTGGTCCCGTATCC -TGGATTCTGTGGAGGACAACTACATTGTACTGAACAAAGATGACAACGAG -GAATGTGGGGATGTCTGTCCAGGCACCGCCAAGGGCA-AGACCAA--CTG -TCCTGCCACTGTCATCAATGGGCAGTTTGTGGAACGGTGCTGGACACACA -GTCATTGTCAGAAAGTTTGCCCAACCATCTGTAAGTCACATGGCTGCACA -GCTGAAGGCCTGTGCTGCCACAAAGAGTGCCTGGGCAACTGTTCGGAACC -TGATGACCCCACCAAGTGTGTGGCCTGTCGCAACTTCTATCTGGATGGTC -AGTGTGTGGAGACCTGCCCGCCACCCTACTATCACTTCCAGGACTGGCGC -TGTGTGAACTTCAGCTTCTG--CCAAGACCTTCA-CTTCAAATGCAGGAA -CTCTCGGAAGCCTGGCTGCCACCAATACGTCATTCACAACAATAAGTGCA -TCCCCGAGTGCCCGTCTGGCTATACCATGAATTCCAGC---AACTTGATG -TGCACCCCATGTCTGGGACCCTGCCCTAAGGTCTGCCAA-ATCCTC-GAA -GGTG-AGAAGACCATTGATTCTGTGACATCTGCCCAGGAGCTCCGAGGCT -GCACTGTGATCAACGGTAGCCTGATCATCAACATCCGAGGGGGCAACAAC -CTGGCAGCTGAGCTGGAGGCTAACCTTGGCCTCATTGAAGAAATTTCGGG -ATTTCTAAAGATCCGCCGCTCCTATGCTCTGGTATCACTTTCTTTCTTCA -GGAAGCTACATCTGATTCGAGGAGAGACCTTGGAAATTGGGAACTATTCT -TTTTATGCCTTGGACAACCAGAACCTGAGGCAACTCTGGGACTGGAG-CA -AACACAACCTCACCATCACTCAGGGCAAGCTCTTCTTCCATTACAACCCG -AAACTCTGCTTGTCTGAAATTCACAAGATGGAAGAAGTCTCCGGAACTAA -GGGCCGTCAGGAGAGGAACGACATTGCCCTGAAGACCAATGGGGACCAGG -CATCGTGTGAAAATGAATTGCTTAAATTTTCTTTCATTCGGACATCTTTT -GACAAGATCCTGTTGAGGTGGGAACCCTACTGGCCCCCCGACTTCCGAGA -TCTCCTGGGATTCATGTTGTTCTACAAAGAGGCCCCTTATCAGAATGTGA -CAGAGTTTGATGGGCAGGATGCTTGTGGCTCCAACAGCTGGACTGTGGTG -GATATTGACCCGCCCCAGAGGTCCAACGACCCCAAGTCTCAGACCCCAAG -CCACCCTGGGTGGCTGAT-GCGGGGCCTCAAACCCTGGACCCAATACGCC -ATCTTTGTGAAGACCTTGG---TTACCTTCTCTGATGAACGGC-GGACCT -ATGGAGCCAAAAGTGATATCATCTATGTGCAAACAGATGCCACTAATCCT -TCTGTCCCCCTGGATCCCATATCAGTTTCTAATTCCTCATCTCAGATTAT -CTTAAAGTGGAAGCCCCCCTCTGACCCCAATGGCAACATCACACACTACC -TGGTGTACTGGGAGAGGCAAGCAGAGGACAGCGAGCTGTTTGAGCTGGAT -TATTGTCTCAAAGGGCTGA-AGCTCCCTTCACGGACCTGGTC---CCCAC -CCTTTGAGTCTGATGAT-T--CTCAGAAGCACAA-TCAGA-GT-GAGTA- -TGACGACTCGGCCAGTGAGTGC-TGCTCATGCCC-TAAGACTGACTCTCA -GATCCTGAAGGAGCTGGAGGAGTCTTCATTCAGGAAGACCTTCGAGGATT -ACCTGCACAACGTGGTTTTTGTCCCCAGGCCATCCCGAAAGCGAAGATCC -CTTGAAGAGGTGGGGAATGTGACA---GCCACCACACTCA-CACTTCCAG -ATTTCCCCAACGT-CTCCTCTACCATTGTGCCC-ACAAGTCAG-G-AGGA -GCACAGGCCATTTGAGA---AAGTGGTGAACAAGGAGTCACTTGTCATCT -CTGGCCTGAGACACTTCACTGGGTACCGCATTGAGCTGCAGGCATGCAAT -CAAGATTCCCCAGAT-GAGAGGTGCAGTGTGGCTGCCTACGTCAGTGCCC -GGACCATGCCTGAAGCTAAGGCAGATGACATCGTTGGCCCTGTGACTCAT -GAA---ATCTTTGAGAACAATGTTGTACACTTAATGTGGCAAGAGCCAAA -GGAACCTAATGGTCTGATTGTGCTATATGAAGTGAGCTATCGCCGATATG -GTGATGAGGAG-CTGCACCTCTGTGTCTCCCGGAAGCATTTTGCCCTGGA -GCGGGGCTGCAGGCTGCGAGGGCTCTCCCCAGGAAACTACAGTGTTCGAG -TCCGGGCTACCTCTCTGGCAGGAAATGGCTCCTGGACAGAACCCACCTAT -TTTTATGTGACTGAT-TATTTAGATGTCCCATCAAA-TATTGCCAAAATT -ATCATTGGACCCCTCATCTTTGTCTTCCTCTTCAGTGTTG--TGATTGGA --AGTAT---TTATCTATTTCTGAGAAAGAGG-----CAGCCGGATGGGCC -AATGGGACCACTGTATGCATCTTCAAACCCTGAGTACCT-CAGTGCCAGT -GATGTGTTTCCATCTTCTGTGTACGTGCCGGACGAGTGGGAGGTGCCTCG -AGAGAAGATCACCCTTCTTCGAGAGCTGGGGCAGGGATCCTTTGGTATGG -TGTATGAAGGCAATGC-CAAGGATA--TCATCAAGGGTGAGGCAGAGACC -CGTGTTGCGGTTAAGACTGTCAATGAGTCAGCCAGTCTTCGAGAACGGAT -CGAGTTCCTCAATGAGGCATCAGTCATGAAGGGATTCACCTGCCATCATG -TGGTCCGCCTTCTTGGGGTGGTATCCAAAGGACAGCCAACGCTGGTAGTG -ATGGAATTGATGGCTCATGGAGACCTGAAAAGTCACCTCCGTTCTCTGAG -GCCAGATGCTGA---GAATAACCCAGGCCGCCCTCCCCCTACCTTGCAAG -AAATGATTCAGATGACAGCAGAAATTGCTGATGGCATGGCATACTTGAAC -GCCAAGAAGTTTGTGCACCGGGACCTGGCAGCTCGAAACTGCATGGTTGC -CCATGATTTTACTGTCAAAATTGGAGACTTTGGAATGACAAGGGACATCT -ACGAGACAGATTACTATCGGAAAGGGGGCAAGGGACTGCTTCCTGTGAGG -TGGATGTCACCTGAGTCCCTGAAGGATGGAGTCTTTACTGCTTCTTCTGA -TATGTGGTCCTTTGGGGTGGTCCTTTGGGAAATCACTAGCCTGGCTGAGC -AACCTTATCAAGGCCTGTCTAATGAACAGGTGTTGAAGTTTGTCATGGAT -GGAGGCTATCTGGATCCCCCTGATAACTGTCCAGAGAGACTCACTGACCT -GATGCGCATGTGCTGGCAGTTCAACCCCAAGATGAGGCCAACCTTCCTGG -AAATCGTCAACCTGCTCAAGGATGACCTCCACCCCAGCTTTCCAGAAGTT -TCCTTCTTCTACAGCGAGGAGAACAAGGCTCCTGAGAGTGAGGAGCTGGA -----GAT------------GGAGTTTGAAGACATGGAGAATGTCCCGTTG -GATCGTTC----------------CTCTCACTGTCAGAGAGAA---GAG- -GCTGGGGGCCGGGAGGGA---GGGTCCTCA----CTGAGCATCAAACGGA -CCTATGATGA-ACACATCCCCTATACCCACATGAATGGGGGCAAGAAGAA -CGGACGTGTCCTTACCCTGCCAAGGTCAAACCCTTCCTAA -* ->DL;ENSCAFT00000026349_canisfamiliaris - -ATGGCAGT---GCCCAGT--CTGTGCCCATGG-GTCGC-ATGC--CTGCT -GGTGATCCTCCTCTCCTTGGGATTTGGCCTGGAC------------ACAC -TAGAGG--TGTG-CCCCAGCCTGGACATCCGCTCAGAGGTGGCGG-AGCT -GCGCCGGCTGGAGAACTGCAGCGTGGTGGAGGGCCATCTGCAGATCCTGC -TCATGTTCACGGCCACGGGCGAGGACTTCCGCGGCCTCAGCTTCCCGCGC -CTCACTCAGGTCACTGACTACCTGCTGCTCTTCCGCGTGTATGGCCTGGA -GAGCCTGCGGGACCTCTTCCCCAACCTCGCGGTCGTGCGTGGCGCCCGCC -TCTTCCTGGGTTATGCGCTGGTGGTCTACGAGATGCCGCACCTGCGGGAC -GTGGGGCTGCCGGCGCTGGGGGCCGTGCTGCGTGGGGCCGTGCGGGTGGA -GAAGAACCAGGAGCTCTGTCATCTCTCCACCATCGACTGGGGGCTGCTGC -AGCCCTCGCCCAGCGCCAACCACATCGTGGGCAACAA-GCTGCGT--GAG -GAGTGTGCCGACGTGTGCCCTGGTGTGCTGGGTGCCACCGGCCAGCCCTG -CGCCAGGACCACCTTCAGTGGGCACACCGACTACAGATGCTGGACCTCCA -GCCACTGCCAGAGAGTGTGTCCCTGCCCCCATGGG---CTGGCCTGCACA -GCTGGGGGTGAGTGCTGCCACACTGAATGCCTGGGGGGCTGCAGCCGGCC -GGAAGACCCCCGCGCCTGCGTCGCCTGTCGCCACCTCTACTTCCAGGGTG -CCTGCCACCGGGCCTGCCCTCCAGGCACCTACCAGCACGAGTCCTGGCGC -TGTGTCACGGCAGAGCGCTGTGCCAGCCTGCG---CTCTGTGCCCGGCCG -CAC---------------CTCCATCTTTGGCATCCACGAGGGCAGCTGCC -TGGCCCAGTGCCCTCCGGGCTTCACCCGCAACGGCAGC---AGCATGTTC -TGCCACAAGTGTGAGGGGCTGTGCCCCAAAGAGTGCA---AGGT------ -GGGTACCAAGACCATCGACTCCACGCAGGCGGCACAGGACCTGGCGGGCT -GCACCCACGTGGAGGGGAGCCTCATCATCAACCTCCGCCAGGGCTACAAC -CTAGAGCTGGAGCTGCAACAGAGCCTGGGGCTGATAGAGACCATCACTGG -CTTCCTCAAGATCAAGCACTCCTTTGCCCTCGTGTCCCTGGGCTTTTTCA -AGAACCTCAAACTCATCCGAGGGGACGCCATGGTGGATGGGAACTACACC -CTGTATGTGCTGGACAACCAGAACCTACAGCAGCTGGGGGCCTGGGTGGC -TGCGG-GGCTCACCATTCCCGTGGGCAAGATATACTTCGCTTTCAACCCT -CGCCTCTGCTTGGAGCACATCTACCGCCTGGAAGAGGTGACCGGCACGCG -GGGACGGCAAAACAAGGCTGAGATCAACCCCCGCACCAACGGAGACCGCG -CCGCCTGCCAAACTCGCACCCTGCGCTTCGTGTCCAACGTGACGCAAGCT -GACAGCATCTTGCTGCGCTGGGAGCGCTACGAGCCGCTGGAGGCTCGGGA -CCTGCTCAGCTTCATCGTGTACTACAAGGAGTCCCCATTCCAGAATGCCA -CAGAGCACACAGGTCCAGATGCCTGTGGAACCCAGAGCTGGAACCTGCTG -GATGTGGAGCTGCCCTTAAG---CCGCACCC--------AAGAACC---- ------CGGGGT-AACTCTAGCA-CCCCTCAAGCCCTGGACACAATATGCA -GTGTTTGTACGGGCCATCACACTGACCACTG-CTGAGGACAGCCCCCACC -AAGGAGCCCAGAGCCCCATCGTCTACCTCCGAACCCTGCCTGCGGCGCCC -ACTGTGCCCCAGGACGTCATCTCCACGTCCAATTCCTCGTCCCACCTGCT -CGTGCGCTGGAAGCCACCGATTCAGCGCAACGGGAACATCACCTACTACC -TGGTGCTGTGGCAGCGTCTGGCGGAGGACGGCGACCTCTATCTCAACGAC -TACTGCCACCGCGGCCTGCGGCTGCCCACCAGCAACAACGAC---CCGC- -GCTTCGACCGCGAGGA-----CGGTGAACTCGAAG-CCGAGATGGAGCC- --GG-GCTGC----TGCCCTTGCCAGCACCCACCGCCTGGGCAG--GTCCT -GCCGCCGCTGGAGGCGCAAGAGGCCTCGTTCCAGAAGAAGTTCGAAAACT -TCCTGCACAACGCCATCACCATCCCCAAGTCCCCCTGGAAGGTGACGTCC -GTCA-ATAAGAGCCCTCAAAGA-------CATGCGG-GGAGGCACCGCCG -GGC-GGCCGGGGCGCTCC---GGCTTGGGGGC--AACAGCTCG-----GA -TTTCGAGATCCAGGAGGACAAAGTGC---CCCGGGAGCGAGCAGTGTTGA -GTGGTCTGCGCCACTTTACGGAATATCGTATCGACATCCACGCCTGCAAC -CACGCGGCT-CACACCGTGGGCTGCAGCGCGGCCACGTTCGTCTTCGCGC -GCACCATGCCGCACAGAGAAGCTGATGGCATCCCAGGGAAGGTGGCCTGG -GAGGCAGCCAGCAAAAGC---AGTGTCCTCCTGCGCTGGCTGGAGCCACC -TGACCCCAACGGACTCATCCTCAAGTATGAAATCAAGTACCGCCGCTTGG -GAGAGGAGGCCACAGT-GCTATGTGTGTCCCGCCTACGATATGCCAAATT -TGGGGGTGTCCAGCTGGCCCTGCTGCCCCCTGGAAACTACTCCGCCAGAG -TTCGGGCAACCTCGCTGGCTGGCAACGGCTCCTGGACAGAAAGTATCGCT -TTCTACGTCCCAGGCCCA----GAGG----AGGAAGACTCCGGGGGGCTG -CACGTCCTTCTCACTG---TCACCCCCGTGGGGCTCAT------GCTGTT -CATCATTCTTGCCGCCCTCGGTTTCTTC------TACGGCAGGAAGAG-A -AACAG-CACCCTCTATGCCTCAGTGAATCCGGAGTACTT-CAGCGCCTCT -GAT---------------ATGTACATCCCTGATGAGTGGGAGGTGCCTCG -GGAGCAGATCTCCATAATCCGAGAGCTGGGCCAGGGCTCCTTTGGGATGG -TATATGAAGGCCTGGCACAAGGACTAGAGGCTGGAGAGGAGTCC-ACACC -C--GTGGCCCTGAAGACAGTGAATGAGTTGGCCAGCCCACGAGAACGCAT -TGAGTTCCTCAAGGAAGCTTCTGTCATGAAGGCATTCAAGTGTCACCATG -TGGTACGTCTCCTGGGTGTTGTGTCTCAAGGCCAGCCAACTCTGGTCATC -ATGGAGTTAATGACTCGTGGGGACCTCAAGAGCCATCTTCGATCTCTGCG -GCCTGAGGCAGA---GAACAACCCTGGGCTCCCACGGCCAGCACTGGGAG -ATATGATCCAGATGGCTGGTGAGATTGCAGATGGCATGGCTTACCTCGCT -GCCAACAAGTTTGTGCATCGAGACCTGGCAGCCAGAAACTGCATGGTGTC -CCAGGACTTCACCGTCAAGATTGGGGACTTCGGGATGACTCGAGACGTGT -ACGAGACAGACTATTACCGCAAGGGCGGGAAAGGGCTGCTGCCCGTGCGC -TGGATGGCCCCCGAGTCCCTCAAAGATGGAATCTTCACCACACATTCGGA -TGTTTGGTCCTTCGGGGTGGTGCTCTGGGAGATCGTGACCCTAGCTGAAC -AGCCCTACCAGGGTTTATCCAACGAGCAGGTGCTCAAGTTTGTCATGGAT -GGTGGGGTCCTGGAGGAGCTGGAGAGCTGTCCCCTTCAGCTGCAAGAACT -GATGAGCCGCTGCTGGCAGCAGAACCCACGCCTGCGGCCCACCTTCACCC -ACATCCTGGACAGCATTCGGGGGGAACTGCGGCCCTCTTTCCGCCTCTTT -TCCTTCTATTACAGCCCAGAGTG-------------CCAGGGGAGCCAGG -GGGCCCT------------GCTGCCTAATGCC-----------------A -AACCCAA-------------CTCCCTACCA-----------A-------- --------CCCCAGAAGGG-----GCTC------------CCTC------- ------------AGACTG-C---ATGCCC-CA-AAATGGGGGTC------- -----------C-----------AGGGC--------ACTGA -* ->DL;ENSMUST00000005671_homosapiens - -ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT -CGTGTTTCTCTCCGCCGCGCTC-TCTCTCTGGCCGA---C-----GAGTG -GAGAAATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGC-AGCT -GAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGC -TCATCTCCAAGG------CCGAGGACTACCGAAGCTACCGCTTCCCCAAG -CTCACCGTCATCACTGAGTACTTGCTGCTCTTCCGAGTCGCTGGCCTCGA -GAGCCTGGGAGACCTCTTCCCCAACCTCACAGTCATCCGTGGCTGGAAAC -TCTTCTACAACTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGAT -ATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA -GAAGAACGCCGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCT -TGGATGCGGTGTCCAATAACTACATTGTGGGGAACAA-GCCCCCG--AAG -GAATGTGGGGACCTGTGTCCAGGGACATTGGAGGAGA-AGCCCAT--GTG -TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA -ATCGCTGCCAGAAAATGTGCCCAAGTGTGTGCGGGAAGCGAGCCTGCACC -GAGAACAACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACC -GGACGACAACACAACCTGCGTGGCCTGCAGACACTACTACTACAAAGGCG -TGTGTGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGC -TGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGA -CTC---------------GGATGGCTTCGTTATCCACGACGATGAGTGCA -TGCAGGAGTGTCCCTCAGGCTTCATCCGCAACAGCACCCAGAGCATGTAC -TGTATCCCCTGCGAAGGCCCCTGCCCCAAAGTCTGCGGCGATGAAGAGAA -GAAAACGAAAACCATCGATTCGGTGACTTCTGCTCAAATGCTCCAAGGAT -GCACCATCCTGAAGGGCAATCTGCTTATTAACATCCGGAGAGGCAATAAC -ATTGCCTCGGAGTTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACCGG -CTACGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTGA -AGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTGGAAGGGAACTACTCC -TTCTATGTCCTAGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAA-CC -ACCGGAACCTGACCGTCAGGTCCGGAAAGATGTACTTTGCTTTCAATCCC -AAGCTGTGTGTCTCCGAAATTTACCGCATGGAGGAAGTGACCGGAACCAA -GGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAG -CTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTCCACCACGACCTGGAAG -AACCGAATCATCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGA -TCTCATCAGCTTCACAGTTTACTACAAGGAGGCACCATTTAAAAACGTTA -CGGAATATGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTG -GATGTAGACCTGCCTCCGAA---CAAGGAGG--------GCGAGCC---- ------TGGCAT-TTTACT-GCATGGGCTGAAGCCCTGGACCCAGTATGCT -GTCTATGTCAAGGCTGTGACCCTCACCATGG-TGGAAAACGACCATATCC -GTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAATGCTTCAGTCCCT -TCCATTCCCCTAGATGTCCTCTCAGCATCAAACTCTTCCTCTCAGCTGAT -TGTGAAGTGGAATCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACA -TTGTGAGGTGGCAGCGGCAGCCCCAGGATGGTTACCTGTACCGGCACAAC -TACTGCTCCAAAGA-CAA--AATACCCATCAGAAAGTACGCCGATGGTA- -CCATCGACGTGGAGGAGGTGACGGAAAATCCCAAGACAGAAGT-GTGTGG -TGGTGATAA---AGGGCCATGC-TGCGCTTGCCC-TAAAACTGAAGCTGA -GAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATT -TCCTTCACAATTCCATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGAC -GTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCAC -GGT-AGCTGACAC-CTACAATATCACAGACCCGGAGGAGTTCGAGACAGA -GTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATCT -CCAACCTCCGGCCTTTCACTCTGTACCGCATCGATATCCACAGCTGCAAC -CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTCGTCTTTGCGA -GAACCATGCCAGCAGAAGGAGCAGATGATATCCCTGGTCCGGTGACCTGG -GAGCCAAGACCCGAAAAC---TCCATCTTTTTAAAGTGGCCAGAACCCGA -GAACCCCAACGGATTGATCCTAATGTATGAAATTAAATACGGGTCGCAA- ---GTCGAGGAT-CAGCGGGAATGTGTGTCCAGACAGGAGTACAGGAAGTA -CGGAGGGGCCAAACTCAACCGTCTAAACCCAGGGAACTATACAGCCCGGA -TTCAGGCTACCTCCCTCTCTGGGAATGGGTCATGGACAGATCCTGTGTTC -TTCTATGTCCCCGCC-AA----AACGACGTATGAGAACTTCATGCATCTG -ATCATTGCTCTGCCGG---TTGCCATCCTGCTGATCGTTGGGGGGCTGGT -TATCATGCTGTATGTCTTCCATAGAAAGAGAAATAACAGCAGGTTGGG-C -AATGG-AGTGCTGTATGCTTCTGTGAACCCCGAGTATTT-CAGCGCAGCT -GAT---------------GTGTACGTGCCTGATGAATGGGAGGTAGCTCG -AGAGAAGATCACCATGAACCGGGAGCTCGGACAAGGGTCCTTTGGGATGG -TCTATGAAGGAGTGGC-CAAGGGTG--TGGTCAAGGATGAACCCGAAACC -AGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGTATGCGTGAAAGAAT -CGAGTTTCTCAACGAGGCCTCGGTGATGAAGGAGTTCAATTGTCACCATG -TGGTCCGGTTGCTGGGTGTGGTATCCCAAGGCCAGCCCACCCTGGTCATC -ATGGAACTAATGACACGCGGTGATCTCAAAAGTTATCTCCGGTCTCTGAG -GCCAGAAGTGGAGCAGAATAATCTAGTCCTCATTCCTCCGAGCTTAAGCA -AGATGATCCAGATGGCTGGAGAGATTGCAGATGGCATGGCCTACCTCAAT -GCCAACAAGTTCGTCCACAGAGACCTTGCTGCTAGGAACTGCATGGTAGC -CGAAGATTTCACAGTCAAAATTGGAGATTTCGGTATGACACGAGACATCT -ACGAGACGGACTACTACCGGAAAGGCGGGAAGGGGTTGCTGCCTGTGCGC -TGGATGTCTCCCGAGTCCCTCAAGGATGGTGTCTTCACTACTCATTCTGA -TGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACGCTGGCTGAGC -AGCCCTACCAGGGCTTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAG -GGTGGCCTTCTGGACAAGCCGGACAACTGCCCTGATATGCTGTTTGAACT -TATGCGCATGTGCTGGCAGTATAACCCCAAGATGCGGCCCTCCTTCCTGG -AGATCATCGGCAGCATCAAGGATGAGATGGAGCCCAGCTTCCAGGAGGTC -TCCTTCTACTACAGCGAGGAGAACAAGCCTCCCGAGCCAGAGGAGCTGGA -----GAT------------GGAGCCTGAGAACATGGAGAGCGTCCCACTG -GACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGG -ACACAAGGCTGAGAATGGCCCGGGCCCTGGCGTGCTCGTTCTCCGCGCCA -GTTTTGATGAGAGACAG-CCTTACGCTCACATGAACGGGGGACGCGCCAA -CGAGAGGGCCTTGCCTCTGCCCCAGTCCTCGACCTGCTGA -* ->DL;ENSRNOT00000019267_rattusnorvegicus - -ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT -CGTGTTTCTCTCCGCCGCGCTC-TCGCTCTGGCCGA---C-----GAGTG -GAGAAATTTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGC-AGCT -GAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCTTCCTCCACATCCTGC -TCATCTCCAAGG------CCGAGGACTACCGAAGCTACCGCTTCCCCAAG -CTCACGGTCATCACCGAGTACTTGCTGCTGTTTCGAGTGGCCGGCCTCGA -GAGCCTGGGAGACCTCTTCCCGAACCTCACAGTCATCCGTGGCTGGAAAC -TCTTCTACAATTACGCACTGGTCATCTTCGAGATGACCAATCTCAAGGAT -ATTGGGCTTTATAATCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA -GAAAAACGCTGACCTCTGTTACCTCTCCACCATAGACTGGTCTCTCATCT -TGGATGCGGTGTCCAATAACTACATTGTGGGGAACAA-GCCCCCA--AAG -GAATGTGGGGACCTGTGTCCAGGGACCTTGGAGGAGA-AGCCCAT--GTG -TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA -ATCGCTGCCAGAAAATGTGCCCAAGTGTGTGTGGGAAGCGAGCCTGCACC -GAGAACAATGAGTGCTGCCACCCGGAGTGCCTAGGCAGCTGCCACACACC -GGACGACAACACAACCTGCGTGGCCTGCCGACACTACTACTACAAAGGCG -TGTGCGTGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGGGCTGGCGC -TGTGTGGACCGGGATTTCTGCGCCAACATCCCCAACGCCGAGAGCAGTGA -CTC---------------AGATGGCTTCGTCATCCACGATGGCGAGTGCA -TGCAGGAGTGTCCATCAGGCTTCATCCGCAACAGCACCCAGAGCATGTAC -TGTATCCCCTGTGAAGGCCCCTGCCCCAAGGTCTGCGGCGATGAAGAAAA -GAAAACGAAAACCATCGATTCTGTGACGTCTGCCCAGATGCTCCAAGGGT -GCACCATTTTGAAGGGCAATCTGCTTATTAACATCCGGCGAGGCAATAAC -ATTGCCTCGGAATTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACTGG -CTACGTGAAGATCCGCCATTCCCATGCCTTGGTCTCCTTGTCCTTCCTGA -AGAACCTTCGTCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAACTACTCC -TTCTATGTCCTGGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAA-CC -ACCGGAACCTGACCGTCAGGTCAGGGAAAATGTACTTCGCTTTCAATCCC -AAGCTGTGTGTCTCTGAAATTTACCGGATGGAGGAGGTGACAGGAACAAA -GGGACGGCAGAGCAAAGGAGACATAAACACCAGGAACAACGGAGAGCGAG -CTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTCCACCACCACCTGGAAG -AACCGCATCATCATAACGTGGCACCGGTACCGGCCGCCGGACTACCGGGA -TCTCATCAGTTTCACAGTCTACTACAAGGAGGCACCCTTTAAAAACGTCA -CGGAATACGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTG -GACGTGGACCTGCCTCCGAA---CAAGGAGG--------GGGAGCC---- ------TGGCAT-TTTGCT-GCATGGGCTGAAGCCCTGGACCCAGTATGCA -GTCTATGTCAAGGCTGTGACCCTCACCATGG-TGGAAAACGACCACATCC -GTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAACGCTTCAGTTCCT -TCCATTCCTCTAGATGTCCTCTCGGCATCAAACTCCTCCTCTCAGCTGAT -CGTGAAGTGGAACCCCCCAACTCTGCCCAATGGTAACTTGAGTTACTACA -TTGTGAGGTGGCAGCGGCAGCCGCAGGATGGCTATCTGTTCCGGCACAAC -TACTGCTCCAAAGA-CAA--AATACCCATCAGAAAGTACGCCGATGGTA- -CCATCGATGTGGAGGAGGTGACAGAAAATCCCAAGACAGAAGT-GTGCGG -TGGTGATAA---AGGGCCGTGC-TGTGCCTGTCC-TAAAACCGAAGCTGA -GAAGCAGGCTGAGAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATT -TCCTTCACAACTCCATCTTTGTGCCCAGACCTGAGAGGAGGCGGAGAGAT -GTCCTGCAGGTGGCTAACACCACCATGTCCAGCCGAAGCAGGAACACCAC -GGT-AGCTGACAC-CTACAATATCACAGACCCGGAAGAGTTCGAGACAGA -ATACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATTT -CCAACCTCCGGCCTTTCACTCTGTACCGTATCGATATCCACAGCTGCAAC -CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTTGTCTTTGCAA -GAACCATGCCAGCAGAAGGAGCAGATGACATTCCTGGCCCAGTGACCTGG -GAGCCAAGACCTGAAAAC---TCCATCTTTTTAAAGTGGCCAGAACCCGA -GAACCCCAACGGATTGATTCTAATGTATGAAATAAAATACGGATCGCAA- ---GTCGAGGAT-CAGCGGGAATGTGTGTCCAGACAGGAGTACAGGAAGTA -TGGAGGGGCCAAACTTAACCGTCTAAACCCAGGGAACTATACGGCCCGGA -TTCAGGCTACCTCCCTCTCTGGGAATGGGTCGTGGACAGATCCTGTGTTC -TTCTATGTCCCAGCC-AA----AACAACGTATGAGAATTTCATGCATCTG -ATCATTGCTCTGCCGG---TTGCCATCCTGCTGATTGTGGGGGGCCTGGT -AATCATGCTGTATGTCTTCCATAGAAAGAGG-------G-TGTCTGGGCC -AGCAG-AAGGCAGTAG----TTGGAAA---GGGCCATTTCCATCCTGTCT -GTT----------C-CTAGTGTACGTGCCTGATGAATGGGAGGTAGCTCG -GGAGAAGATCACCATGAACCGGGAGCTCGGACAAGGGTCCTTCGGGATGG -TCTATGAAGGAGTGGC-CAAGGGCG--TGGTCAAGGACGAGCCTGAAACC -AGAGTGGCCATCAAGACAGTGAATGAGGCTGCAAGTATGCGTGAGAGAAT -TGAGTTTCTCAACGAGGCCTCAGTGATGAAGGAGTTCAACTGTCACCATG -TGGTCCGGTTGCTGGGTGTAGTATCCCAAGGCCAGCCCACCCTGGTCATC -ATGGAACTAATGACACGTGGCGATCTCAAAAGTTATCTCCGGTCTCTAAG -GCCAGAGGTGGA---GAATAATCTAGTCCTGATTCCTCCGAGCTTAAGCA -AGATGATCCAGATGGCTGGAGAGATTGCAGATGGCATGGCCTACCTCAAT -GCCAACAAGTTCGTCCACAGAGACCTGGCTGCTCGGAACTGCATGGTAGC -TGAAGATTTCACAGTCAAAATTGGAGATTTTGGTATGACACGAGACATCT -ACGAGACGGACTACTACCGGAAAGGCGGGAAGGGCTTGCTGCCTGTGCGC -TGGATGTCTCCCGAGTCCCTCAAGGATGGCGTCTTCACCACTCATTCCGA -TGTCTGGTCCTTTGGGGTCGTCCTCTGGGAGATCGCCACTCTGGCTGAGC -AGCCGTACCAGGGCCTGTCCAACGAGCAAGTTCTTCGTTTCGTCATGGAG -GGCGGCCTTCTGGACAAGCCGGATAACTGCCCCGATATGCTGTTTGAACT -TATGCGCATGTGCTGGCAGTACAACCCCAAGATGCGGCCCTCCTTCCTGG -AGATCATCGGAAGCATCAAGGATGAGATGGAGCCCAGTTTCCAGGAGGTC -TCCTTCTACTACAGCGAGGAGAACAAGCCTCCAGAGCCGGAGGAGCTGGA -----GATGGAGCTGGAGCTGGAGCCCGAGAACATGGAGAGCGTCCCGCTG -GACCCTTCGGCCTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGG -ACACAAGGCTGAGAACGG------CCCTGGCGTGCTGGTTCTCCGTGCCA -GTTTTGATGAGAGACAG-CCTTACGCTCACATGAATGGGGGACGCGCCAA -CGAGAGGGCCTTGCCTCTGCCCCAGTCCTCAA---CCTGC -* ->DL;ENSPTRT00000013802_pantroglodytes - -ATGAA-GTCTGGCTCCGGAGGAGGGTCCCCGACCTCGCTGTGG--GGGCT -CCTGTTTCTCTCCGCCGCGCTC-TCGCTCTGGCCGA---C-----GAGTG -GAGAAATCTGCGGGCCAGGCATCGACATCCGCAACGACTATCAGC-AGCT -GAAGCGCCTGGAGAACTGCACGGTGATCGAGGGCTACCTCCACATCCTGC -TCATCTCCAAGG------CCGAGGACTACCGCAGCTACCGCTTCCCCAAG -CTCACGGTCATTACCGAGTACTTGCTGCTGTTCCGAGTGGCTGGCCTCGA -GAGCCTCGGAGACCTCTTCCCCAACCTCACGGTCATCCGCGGCTGGAAAC -TCTTCTACAACTACGCCCTGGTCATCTTCGAGATGACCAATCTCAAGGAT -ATTGGGCTTTACAACCTGAGGAACATTACTCGGGGGGCCATCAGGATTGA -GAAAAATGCTGACCTCTGTTACCTCTCCACTGTGGACTGGTCCCTGATCC -TGGATGCGGTGTCCAATAACTACATTGTGGGGAATAA-GCCCCCA--AAG -GAATGTGGGGACCTGTGTCCAGGGACCATGGAGGAGA-AGCCGAT--GTG -TGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAA -ACCGCTGCCAGAAAATGTGCCCGAGCACGTGTGGGAAGCGGGCGTGCACC -GAGAACAACGAGTGCTGCCACCCCGAGTGCCTGGGCAGCTGCAGCGCGCC -TGACAACGACACGGCCTGTGTAGCTTGCCGCCACTACTACTATGCCGGTG -TCTGTGTGCCTGCCTGCCCGCCCAACACCTACAGGTTTGAGGGCTGGCGC -TGTGTGGACCGTGACTTCTGCGCCAACATCCTCAGCGCCGAGAGCAGCGA -CTC---------------CGAGGGGTTTGTGATCCACGACGGCGAGTGCA -TGCAGGAGTGCCCCTCGGGCTTCATCCGCAACGGCAGCCAGAGCATGTAC -TGCATCCCTTGTGAAGGTCCTTGCCCGAAGGTCTGTG---AGGAAGAAAA -GAAAACAAAGACCATTGATTCTGTTACTTCTGCTCAGATGCTCCAAGGAT -GCACCATCTTCAAGGGCAATTTGCTCATTAACATCCGACGGGGGAATAAC -ATTGCTTCAGAGCTGGAGAACTTCATGGGGCTCATCGAGGTGGTGACGGG -CTACGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTTGTCCTTCCTAA -AAAACCTTCGCCTCATCTTAGGAGAGGAGCAGCTAGAAGGGAATTACTCC -TTCTACGTCCTCGACAACCAGAACTTGCAGCAACTATGGGACTGGGA-CC -ACCGCAACCTGACCATCAAAGCAGGGAAAATGTACTTTGCTTTCAATCCC -AAATTATGTGTTTCCGAAATTTACCGCATGGAGGAAGTGACGGGGACTAA -AGGGCGCCAAAGCAAAGGGGACATAAACACCAGGAACAACGGGGAGAGAG -CCTCCTGTGAAAGTGACGTCCTGCATTTCACCTCCACCACCACGTCGAAG -AATCGCATCATCATAACCTGGCACCGGTACCGGCCCCCTGACTACAGGGA -TCTCATCAGCTTCACCGTTTACTACAAGGAAGCACCCTTTAAGAATGTCA -CGGAGTATGATGGGCAGGACGCCTGCGGCTCCAACAGCTGGAACATGGTG -GACGTGGACCTCCCGCCCAA---CAAGGACG--------TGGAGCC---- ------CGGCAT-CTTACT-ACATGGGCTGAAGCCCTGGACTCAGTACGCC -GTTTACGTCAAGGCTGTGACCCTCACCATGG-TGGAGAATGACCATATCC -GTGGGGCCAAGAGTGAGATCTTGTACATTCGCACCAATGCTTCAGTTCCT -TCCATTCCCTTGGACGTTCTTTCAGCATCGAACTCCTCTTCTCAGTTAAT -CGTGAAGTGGAACCCTCCCTCTCTGCCCAACGGCAACCTGAGTTACTACA -TTGTGCGCTGGCAGCGGCAGCCTCAGGACGGCTACCTTTACCGGCACAAT -TACTGCTCCAAAGA-CAA--AATCCCCATCAGGAAGTATGCCGACGGCA- -CCATCGACATTGAGGAGGTCACAGAGAACCCCAAGACTGAGGT-GTGTGG -TGGGGAGAA---AGGGCCTTGC-TGCGCCTGCCC-CAAAACTGAAGCCGA -GAAGCAGGCCGAGAAGGAGGAGGCTGAATACCGCAAAGTCTTTGAGAATT -TCCTGCACAACTCCATCTTCGTGCCCAGACCTGAAAGGAAGCGGAGAGAT -GTCATGCAAGTGGCCAACACCACCATGTCCAGCCGAAGCAGGAACACCAC -GGC-CGCAGACAC-CTACAACATCACCGACCCGGAAGAGCTGGAGACAGA -GTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGGAGAGAACTGTGATTT -CTAACCTTCGGCCTTTCACATTGTACCGCATCGATATCCACAGCTGCAAC -CACGAGGCT-GAGAAGCTGGGCTGCAGCGCCTCCAACTTTGTCTTTGCAA -GGACTATGCCCGCAGAAGGAGCAGATGACATTCCTGGGCCAGTGACCTGG -GAGCCAAGGCCTGAAAAC---TCCATCTTTTTAAAGTGGCCGGAACCTGA -GAATCCCAATGGATTGATTCTAATGTATGAAATAAAATACGGATCACAA- ---GTTGAGGAT-CAGCGAGAATGTGTGTCCAGACAGGAATACAGGAAGTA -TGGAGGGGCCAAGCTAAACCGGCTAAACCCGGGGAACTACACAGCCCGGA -TTCAGGCCACATCTCTCTCTGGGAATGGGTCGTGGACAGATCCTGTGTTC -TTCTATGTCCAGGCC-AA----AACAGGATATGAAAACTTCATCCATCTG -ATCATCGCTCTGCCCG---TCGCTGTCCTGTTGATCGTGGGAGGGTTGGT -GATTATGCTGTACGTCTTCCATAGAAAGAGAAATAACAGCAGGCTGGG-G -AATGG-AGTGCTGTATGCCTCTGTGAACCCGGAGTACTT-CAGCGCTGCT -GAT---------------GTGTACGTTCCCGATGAGTGGGAGGTGGCTCG -GGAGAAGATCACCATGAGCCGGGAACTTGGGCAGGGGTCCTTTGGGATGG -TCTATGAAGGAGTTGC-CAAGGGTG--TGGTGAAAGATGAACCTGAAACC -AGAGTGGCCATTAAAACAGTGAACGAGGCCGCAAGCATGCGTGAAAGGAT -TGAGTTTCTCAACGAAGCTTCTGTGATGAAGGAGTTCAATTGTCACCATG -TGGTGCGATTGCTGGGTGTGGTGTCCCAAGGCCAGCCAACACTGGTCATC -ATGGAACTGATGACACGGGGCGATCTCAAAAGTTATCTCCGGTCTCTGAG -GCCAGAAATGGA---GAATAATCCAGTCCTAGCACCTCCAAGCCTGAGCA -AGATGATTCAGATGGCCGGAGAGATTGCAGACGGCATGGCATACCTCAAC -GCCAATAAGTTCGTCCACAGAGACCTTGCTGCCCGGAATTGCATGGTAGC -CGAAGATTTCACAGTCAAAATCGGAGATTTTGGTATGACGCGAGATATCT -ATGAGACAGACTATTACCGGAAAGGAGGGAAAGGGCTGCTGCCCGTGCGC -TGGATGTCTCCCGAGTCCCTCAAGGATGGAGTCTTCACCACTTACTCGGA -CGTCTGGTCCTTCGGGGTCGTCCTCTGGGAGATCGCCACACTGGCCGAGC -AGCCCTACCAGGGCTTGTCCAACGAGCAAGTCCTTCGCTTCGTCATGGAG -GGCGGCCTTCTGGACAAGCCAGACAACTGTCCCGACATGCTGTTTGAACT -GATGCGCATGTGCTGGCAGTATAACCCCAAGATGAGGCCTTCCTTCCTGG -AGATCATCAGCAGCATCAAAGAGGAGATGGAGCCTGGCTTCCGGGAGGTC -TCCTTCTACTACAGCGAGGAGAACAAGCTGCCCGAGCCGGAGGAGCTGGA -----CCT------------GGAGCCAGAGAACATGGAGAGCGTCCCCCTG -GACCCCTCGGC---------CTCCCTGCCACTGCCCGACAGACACTCAGG -ACACAAGGCCGAGAACGGCCCCGGCCCTGGGGTGCTGGTCCTCCGCGCCA -GCTTCGACGAGAGACAG-CCGTACGCACACATGAACGGGGGCCGCAAGAA -CGAGCGGGCCTTGCCGCTGCCCCAGTCTTCGACCTGCTGA -* diff -r ae69d14b6fbf -r e3507be607eb test-data/output3.txt --- a/test-data/output3.txt Thu Jan 14 12:14:52 2021 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,585 +0,0 @@ -T-COFFEE, Version_13.45.0.4846264 (2020-10-15 17:52:11 - Revision 5becd5d - Build 620) -Cedric Notredame -CPU TIME:0 sec. -SCORE=891 -* - BAD AVG GOOD -* -ENSMUST00000091291_musmusculus : 85 -ENSCAFT00000026349_canisfamiliaris : 85 -ENSMUST00000005671_homosapiens : 88 -ENSRNOT00000019267_rattusnorvegicus : 87 -ENSPTRT00000013802_pantroglodytes : 88 -cons : 89 - -ENSMUST00000091291_musmusculus 99964-33222333333322333333332223-----33333211334444444444444 -ENSCAFT00000026349_canisfamiliaris 88853122---2222222--222222322222-22223-2333--334444554544443 -ENSMUST00000005671_homosapiens 99975-4433344443333333444444444333333434554--445555555554444 -ENSRNOT00000019267_rattusnorvegicus 99975-4433344443333333333333333323333333443--344444454544444 -ENSPTRT00000013802_pantroglodytes 99975-4433334433333333444444444333333434554--445555555444444 -cons 998631322222222222222222333222222222232233300334444444443333 - - -ENSMUST00000091291_musmusculus 3333222222221222222222222211121122223444555555--5554-5678899 -ENSCAFT00000026349_canisfamiliaris 333322222222122222232222------------2233444444--5554-5677889 -ENSMUST00000005671_homosapiens 433333333333-2222333333333---3-----3444455555544555545678899 -ENSRNOT00000019267_rattusnorvegicus 433333333333-2222333433333---3-----3444445555544555545678899 -ENSPTRT00000013802_pantroglodytes 433333333333-3333334444333---3-----3444455555544555545677999 -cons 322222222221011112222222220002000002233344444433555434677899 - - -ENSMUST00000091291_musmusculus 9999999999999998876-4444525888888888999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 9999999999999888876444566-7999999999999999999999999889999999 -ENSMUST00000005671_homosapiens 9999999999999999887555667-7899998899999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 9999999999999999887555667-7899998899999999999999999899999999 -ENSPTRT00000013802_pantroglodytes 9999999999999999887555667-7899998899999999999999999899999999 -cons 999999999999998887644455616899998889999999999999999899999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999999999898874444447999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999999999999999999999999999888874444448999999999999999999999 -ENSMUST00000005671_homosapiens 99999999999999999999999999889888------8899999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 99999999999999999999999999889888------8899999999999999999999 -ENSPTRT00000013802_pantroglodytes 99999999999999999999999999889888------8899999999999999999999 -cons 999999999999999999999999998888873222227899999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999999999999999999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999999999999999888999999999999999999999999999999999999999999 -ENSMUST00000005671_homosapiens 999999999999999999999999999999999999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999999999999999999999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999999999999999999999999999999999999999999 -cons 999999999999999998999999999999999999999999999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999999999999999999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999999999999999999999999999999999999999999999999999999999999 -ENSMUST00000005671_homosapiens 999999999999999999999999999999999999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999999999999999999999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999999999999999999999999999999999999999999 -cons 999999999999999999999999999999999999999999999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999999999999999999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999999999999999999999999999999999999999999999999999889999999 -ENSMUST00000005671_homosapiens 999999999999999999999999999999999999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999999999999999999999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999999999999999999999999999999999999999999 -cons 999999999999999999999999999999999999999999999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999999999999999999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999988888999999999999999999999999999999999999999999999999999 -ENSMUST00000005671_homosapiens 999999988999999999999999999999999999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999988999999999999999999999999999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999988999999999999999999999999999999999999999999999999999 -cons 999999888999999999999999999999999999999999999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999888888888888888999999999999999999999986266 -ENSCAFT00000026349_canisfamiliaris 999999999999999888777777777766777889998999999999999999987-77 -ENSMUST00000005671_homosapiens 999999999999999999888888888888888988999999999999999999987-77 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999888888888888888988999999999999999999987-77 -ENSPTRT00000013802_pantroglodytes 999999999999999999888888888888888988999999999999999999987-77 -cons 999999999999999988888887888777788888999999999999999999987177 - - -ENSMUST00000091291_musmusculus 66555226999999999999999999999999998877777766656-6666676--677 -ENSCAFT00000026349_canisfamiliaris 77666--79999999999999999999999999877666665544442445555422566 -ENSMUST00000005671_homosapiens 76666--7999999999999999999999999998877777766666-6666676--777 -ENSRNOT00000019267_rattusnorvegicus 77667--7999999999999999999999999998877777766666-6666676--777 -ENSPTRT00000013802_pantroglodytes 77667--7999999999999999999999999998877777766666-6666666--677 -cons 666561169999999999999999999999999887777776655551555666511677 - - -ENSMUST00000091291_musmusculus 766555666666777776666667778889999999999999998644578999999999 -ENSCAFT00000026349_canisfamiliaris 766666777777777777666666778889999999999999999776889999999999 -ENSMUST00000005671_homosapiens 877666777777777777777767777889999999999999999766788999999999 -ENSRNOT00000019267_rattusnorvegicus 877666777777777777777767777889999999999999999766788999999999 -ENSPTRT00000013802_pantroglodytes 877777777777777777777767777889999999999999999766788999999999 -cons 776656677777777777666666777889999999999999999666688999999999 - - -ENSMUST00000091291_musmusculus 999999999999999888898887666688899999999999888889999999999999 -ENSCAFT00000026349_canisfamiliaris 9999999999999888888877765---77899999999999888899999999999999 -ENSMUST00000005671_homosapiens 999999999999999888898887666689999999999999888899999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999888898887666689999999999999888899999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999987666688999999999999888899999999999999 -cons 999999999999999888888877655688899999999999888889999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999998889999999999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999999999999999999999999999999999999999988999999999999999999 -ENSMUST00000005671_homosapiens 999999999999999999999999999999999999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999999999999999999999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999999999999999999999999999999999999999999 -cons 999999999999999999999998999999999999999998999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999999999998899999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999999999999999999999999999988899999999999999999999999999999 -ENSMUST00000005671_homosapiens 999999999999999999999999999998899999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999999999999998899999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999999999998899999999999999999999999999999 -cons 999999999999999999999999999998899999999999999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999976655666777876--677765444433-344444444444445 -ENSCAFT00000026349_canisfamiliaris 999999999999999764444566778887667876654433---343333333334434 -ENSMUST00000005671_homosapiens 999999999999999976656677788988667887765554443455554544455555 -ENSRNOT00000019267_rattusnorvegicus 999999999999999976655667788888667887765544444455544455555555 -ENSPTRT00000013802_pantroglodytes 999999999999999976666677788988667887765544443455555555556655 -cons 999999999999999865555566778887666777654433333344333333444444 - - -ENSMUST00000091291_musmusculus 443222222222222222444445578999999999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 433---------------333444678899999999999999999999999999999999 -ENSMUST00000005671_homosapiens 555---------------445555678999999999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 555---------------444555678999999999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 555---------------555556678999999999999999999999999999999999 -cons 443111110100111110333444578999999999999999999999999999999999 - - -ENSMUST00000091291_musmusculus 9999999999999999888999887776---67888888899999999999999999999 -ENSCAFT00000026349_canisfamiliaris 9989899999999999999999998876---67999999999999999999999999999 -ENSMUST00000005671_homosapiens 999999999999999999999999888744588999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999999999888744588999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999999998744588999999999999999999999999999 -cons 999999999999999999999999887633478898889999999999999999999999 - - -ENSMUST00000091291_musmusculus 9999999999999987421-222212-2223344-5789999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 99999999999999853---2222------223346899999999999999999998999 -ENSMUST00000005671_homosapiens 999999999999999853222222222223444557899999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999853222232222223344557899999999999999999999999 -ENSPTRT00000013802_pantroglodytes 99999999999999864---3322222223344557899999999999999999999999 -cons 999999999999998631112221111122223446899999999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999999999999999999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999999999999999999999999999999999999999999999999999999999999 -ENSMUST00000005671_homosapiens 999999999999999999999999999999999999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999999999999999999999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999999999999999999999999999999999999999999 -cons 999999999999999999999999999999999999999999999999999999999999 - - -ENSMUST00000091291_musmusculus 999999999999999999999999999999999999999999999999999999999999 -ENSCAFT00000026349_canisfamiliaris 999999999999999888999999999999999999999999999999999999999999 -ENSMUST00000005671_homosapiens 999999999999999999999999999999999999999999999999999999999999 -ENSRNOT00000019267_rattusnorvegicus 999999999999999999999999999999999999999999999999999999999999 -ENSPTRT00000013802_pantroglodytes 999999999999999999999999999999999999999999999999999999999999 -cons 999999999999999989999999999999999999999999999999999999999999 - 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