Mercurial > repos > ebi-gxa > ct_combine_tool_outputs

comparison ct_combine_tool_outputs.xml @ 6:844689a7f66e draft default tip

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
author ebi-gxa
date Fri, 27 Nov 2020 13:37:40 +0000
parents f2e01e023137
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5:f2e01e023137 6:844689a7f66e
1 <tool id="ct_combine_tool_outputs" name="Cell types - combine tools outputs" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@"> 1 <tool id="ct_combine_tool_outputs" name="Cell types - combine tools outputs" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
2 <description>Combine predictions for single tool from multiple datasets</description> 2 <description>for single tool from multiple datasets</description>
3 <macros> 3 <macros>
4 <import>ct_macros.xml</import> 4 <import>ct_macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
25 <outputs> 25 <outputs>
26 <data name="output_table" format="txt" /> 26 <data name="output_table" format="txt" />
27 </outputs> 27 </outputs>
28 <tests> 28 <tests>
29 <test> 29 <test>
30 <param name="input_tables" value="prod_outputs_scpred/E-MTAB-6386_scpred_final-labs.tsv,prod_outputs_scpred/OTHER-DATASET_scpred_final-labs.tsv" /> 30 <param name="input_tables" value="prod_outputs_scpred/E-ENAD-27_scpred.txt,prod_outputs_scpred/E-GEOD-81608_scpred.txt" />
31 <param name="scores" value="TRUE" /> 31 <param name="scores" value="TRUE" />
32 <param name="exclusions" value="exclusions.yml" /> 32 <param name="exclusions" value="exclusions.yml" />
33 <output name="output_table" file="combined_results.tsv" compare="sim_size" /> 33 <output name="output_table" file="combined_results.tsv" compare="sim_size" />
34 </test> 34 </test>
35 </tests> 35 </tests>