Mercurial > repos > ebi-gxa > ct_get_tool_perf_table

comparison ct_get_tool_perf_table.xml @ 2:20d192db51d2 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit c6a3af3aa798c106d1a8f3e2bf1aef5251d0bb7e"
author ebi-gxa
date Mon, 27 Apr 2020 09:27:49 -0400
parents 71602426b328
children 71c809e81f66
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1:71602426b328 2:20d192db51d2
50 <param type="text" name="label_col_ref" label="Reference label column" value="cell_type" help="Label column in reference file" /> 50 <param type="text" name="label_col_ref" label="Reference label column" value="cell_type" help="Label column in reference file" />
51 <param type="text" name="label_col_pred" label="Predicted file label column" value="pred_label" help="Name of label field in predictions file" /> 51 <param type="text" name="label_col_pred" label="Predicted file label column" value="pred_label" help="Name of label field in predictions file" />
52 <param type="text" name="semantic_sim_metric" label="Semantic similarity metric" value="edge_resnik" help="Type of semantic similarity metric used" /> 52 <param type="text" name="semantic_sim_metric" label="Semantic similarity metric" value="edge_resnik" help="Type of semantic similarity metric used" />
53 </inputs> 53 </inputs>
54 <outputs> 54 <outputs>
55 <data name="output_path" format="tsv" /> 55 <data name="output_path" format="txt" />
56 </outputs> 56 </outputs>
57 <tests> 57 <tests>
58 <test> 58 <test>
59 <param name="input_files" value="results_dir/garnett_output.txt,results_dir/scmap-cell_output.txt,results_dir/scmap-cluster_output.txt,results_dir/scpred_output.txt" /> 59 <param name="input_files" value="results_dir/garnett_output.txt,results_dir/scmap-cell_output.txt,results_dir/scmap-cluster_output.txt,results_dir/scpred_output.txt" />
60 <param name="ref_file" value="reference_sdrf.tsv" /> 60 <param name="ref_file" value="reference_sdrf.tsv" />