Mercurial > repos > ebi-gxa > droplet_barcode_plot

changeset 3:8f605643ccfd draft default tip

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/droplet-rank-plot/.shed.yml commit 39412ddc5dbeb136161a9d9fb0f9f78520159ccc"
author ebi-gxa
date Tue, 24 Mar 2020 12:03:14 -0400
parents 7782648d8b56
children
files dropletBarcodePlot.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/dropletBarcodePlot.xml	Tue Mar 24 07:14:22 2020 -0400
+++ b/dropletBarcodePlot.xml	Tue Mar 24 12:03:14 2020 -0400
@@ -4,7 +4,7 @@
       <requirement type="package" version="0.0.1">scxa-plots</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        $__tool_directory__/dropletBarcodePlot.R --output-plot "${plot_file}" --output-thresholds "${thresholds_file}" --label "${label}" --density-bins "${density_bins}" --roryk-multiplier "${roryk_multiplier}"
+        dropletBarcodePlot.R --output-plot "${plot_file}" --output-thresholds "${thresholds_file}" --label "${label}" --density-bins "${density_bins}" --roryk-multiplier "${roryk_multiplier}"
 #if $input.type == 'mtx_matrix'
 --mtx-matrix ${input.mtx_matrix}
 #if $input.cellsbyrow