Mercurial > repos > ebi-gxa > garnett_get_std_output

comparison garnett_get_std_output.xml @ 1:1023eae1b147 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 241c850301f8094f6aa0016e2335a8b550c29aed"
author ebi-gxa
date Fri, 24 Apr 2020 11:22:22 -0400
parents 40b587883bd9
children 5f05e2901299
comparison
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0:40b587883bd9 1:1023eae1b147
3 <macros> 3 <macros>
4 <import>garnett_macros.xml</import> 4 <import>garnett_macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 garnett_get_std_output.R --input-object '${input_object}' --output-file-path '${output_file_path}' 8 garnett_get_std_output.R --input-object '${input_object}' --classifier '${classifier}' --output-file-path '${output_file_path}'
9 ]]></command> 9 ]]></command>
10 <inputs> 10 <inputs>
11 <param type="data" name="input_object" label="input CDS object" format="rdata" help="CDS object with predicted labels" /> 11 <param type="data" name="input_object" label="input CDS object" format="rdata" help="CDS object with predicted labels" />
12 <param type="data" name="classifier" label="classifier object" format="rdata" help="Classifier object in rdata format" />
12 </inputs> 13 </inputs>
13 <outputs> 14 <outputs>
14 <data name="output_file_path" format="txt" /> 15 <data name="output_file_path" format="txt" />
15 </outputs> 16 </outputs>
16 <tests> 17 <tests>