Mercurial > repos > ebi-gxa > monocle3_learngraph

comparison monocle3-macros.xml @ 1:98e99ab36505 draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 08ac0ad9182623944c4546f8ea8db6a1a537f7eb
author ebi-gxa
date Wed, 29 Jan 2020 10:38:03 -0500
parents 710d112ee525
children 17e74fba97fd
comparison
equal deleted inserted replaced
0:710d112ee525 1:98e99ab36505
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">0.1.2</token> 2 <token name="@TOOL_VERSION@">0.1.3</token>
3 <token name="@HELP@">More information can be found at https://cole-trapnell-lab.github.io/monocle3/ and https://github.com/ebi-gene-expression-group/monocle-scripts</token> 3 <token name="@HELP@">More information can be found at https://cole-trapnell-lab.github.io/monocle3/ and https://github.com/ebi-gene-expression-group/monocle-scripts</token>
4 <token name="@VERSION_HISTORY@"><![CDATA[ 4 <token name="@VERSION_HISTORY@"><![CDATA[
5 **Version history** 5 **Version history**
6
7 0.1.3+galaxy0: Updated to monocle3-cli 0.0.5 to fix bug with tsv inputs.
6 8
7 0.1.2+galaxy0: Initial version based on monocle3-cli 0.0.3 and monocle3 0.1.2 9 0.1.2+galaxy0: Initial version based on monocle3-cli 0.0.3 and monocle3 0.1.2
8 ]]></token> 10 ]]></token>
9 <token name="@INPUT_OPTS@"> 11 <token name="@INPUT_OPTS@">
10 --input-object-format '${input_object_format}' '${input_object_file}' 12 --input-object-format '${input_object_format}' '${input_object_file}'
21 #end if 23 #end if
22 </token> 24 </token>
23 25
24 <xml name="requirements"> 26 <xml name="requirements">
25 <requirements> 27 <requirements>
26 <requirement type="package" version="0.0.3">monocle3-cli</requirement> 28 <requirement type="package" version="0.0.5">monocle3-cli</requirement>
27 <yield/> 29 <yield/>
28 </requirements> 30 </requirements>
29 </xml> 31 </xml>
30 32
31 <xml name="citations"> 33 <xml name="citations">
55 <param name="output_object_format" argument="--output-object-format" type="select" label="Format of output object"> 57 <param name="output_object_format" argument="--output-object-format" type="select" label="Format of output object">
56 <option value="cds3" selected="true">Monocle3 object in RDS</option> 58 <option value="cds3" selected="true">Monocle3 object in RDS</option>
57 </param> 59 </param>
58 <param name="introspective" argument="--introspective" type="boolean" checked="true" label="Print introspective information of output object"/> 60 <param name="introspective" argument="--introspective" type="boolean" checked="true" label="Print introspective information of output object"/>
59 </xml> 61 </xml>
60 62
61 <xml name="verbose_flag"> 63 <xml name="verbose_flag">
62 <param name="verbose" argument="--verbose" type="boolean" checked="false" label="Emit verbose output"/> 64 <param name="verbose" argument="--verbose" type="boolean" checked="false" label="Emit verbose output"/>
63 </xml> 65 </xml>
64 </macros> 66 </macros>