# HG changeset patch # User ebi-gxa # Date 1568641799 14400 # Node ID 710d112ee5253beed25909bbf2c28168113676bc "planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 815e36252846236124957052433572f1c1247114" diff -r 000000000000 -r 710d112ee525 monocle3-learnGraph.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/monocle3-learnGraph.xml Mon Sep 16 09:49:59 2019 -0400 @@ -0,0 +1,79 @@ + + + between cells in dimensionality reduced space + + monocle3-macros.xml + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff -r 000000000000 -r 710d112ee525 monocle3-macros.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/monocle3-macros.xml Mon Sep 16 09:49:59 2019 -0400 @@ -0,0 +1,64 @@ + + 0.1.2 + More information can be found at https://cole-trapnell-lab.github.io/monocle3/ and https://github.com/ebi-gene-expression-group/monocle-scripts + + + --input-object-format '${input_object_format}' '${input_object_file}' + + + --output-object-format '${output_object_format}' output.RDS +#if $introspective + --introspective +#end if + + +#if $verbose + --verbose +#end if + + + + + monocle3-cli + + + + + + + + 10.1038/nmeth.4402 + + @misc{githubscanpy-scripts, + author = {Ni Huang, Krzysztof Polanski, EBI Gene Expression Team}, + year = {2019}, + title = {Monocle3-cli: command line interface for Monocle3}, + publisher = {GitHub}, + journal = {GitHub repository}, + url = {https://github.com/ebi-gene-expression-group/monocle-scripts}, + } + + + + + + + + + + + + + + + + + + + + +