# HG changeset patch
# User ebi-gxa
# Date 1568641829 14400
# Node ID 384b9bcf2807a62e0a1a15c38bbcc211f4391e90
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 815e36252846236124957052433572f1c1247114"
diff -r 000000000000 -r 384b9bcf2807 monocle3-macros.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/monocle3-macros.xml Mon Sep 16 09:50:29 2019 -0400
@@ -0,0 +1,64 @@
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+ 0.1.2
+ More information can be found at https://cole-trapnell-lab.github.io/monocle3/ and https://github.com/ebi-gene-expression-group/monocle-scripts
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+
+ --input-object-format '${input_object_format}' '${input_object_file}'
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+ --output-object-format '${output_object_format}' output.RDS
+#if $introspective
+ --introspective
+#end if
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+#if $verbose
+ --verbose
+#end if
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+ monocle3-cli
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+ 10.1038/nmeth.4402
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+ @misc{githubscanpy-scripts,
+ author = {Ni Huang, Krzysztof Polanski, EBI Gene Expression Team},
+ year = {2019},
+ title = {Monocle3-cli: command line interface for Monocle3},
+ publisher = {GitHub},
+ journal = {GitHub repository},
+ url = {https://github.com/ebi-gene-expression-group/monocle-scripts},
+ }
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diff -r 000000000000 -r 384b9bcf2807 monocle3-preprocess.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/monocle3-preprocess.xml Mon Sep 16 09:50:29 2019 -0400
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+ a Monocle3 object to an initially dimensionally reduced space
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+ monocle3-macros.xml
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