Mercurial > repos > ebi-gxa > salmon_kallisto_mtx_to_10x
diff salmonKallistoMtxTo10x.xml @ 6:17f7e1e51fad draft
planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/salmon-kallisto-mtx-to-10x/.shed.yml commit c06e0424fd25356d1a8c172fb92b383fd9d28e90
| author | ebi-gxa |
|---|---|
| date | Thu, 21 Nov 2019 09:38:48 -0500 |
| parents | cd6007b47199 |
| children | 60fa6080f86f |
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--- a/salmonKallistoMtxTo10x.xml Fri Nov 08 08:49:38 2019 -0500 +++ b/salmonKallistoMtxTo10x.xml Thu Nov 21 09:38:48 2019 -0500 @@ -1,4 +1,4 @@ -<tool id="_salmon_kallisto_mtx_to_10x" name="salmonKallistoMtxTo10x" version="0.0.1+galaxy1"> +<tool id="_salmon_kallisto_mtx_to_10x" name="salmonKallistoMtxTo10x" version="0.0.1+galaxy2"> <description>Transforms .mtx matrix and associated labels into a format compatible with tools expecting old-style 10X data</description> <requirements> <requirement type="package">scipy</requirement> @@ -23,8 +23,8 @@ </inputs> <outputs> - <data name="genes_out" format="txt" from_work_dir="genes.tsv" label="${tool.name} on ${on_string}: genes"/> - <data name="barcodes_out" format="txt" from_work_dir="barcodes.tsv" label="${tool.name} on ${on_string}: barcodes"/> + <data name="genes_out" format="tabular" from_work_dir="genes.tsv" label="${tool.name} on ${on_string}: genes"/> + <data name="barcodes_out" format="tabular" from_work_dir="barcodes.tsv" label="${tool.name} on ${on_string}: barcodes"/> <data name="matrix_out" format="mtx" from_work_dir="matrix.mtx" label="${tool.name} on ${on_string}: matrix" /> </outputs>