diff salmonKallistoMtxTo10x.xml @ 6:17f7e1e51fad draft

planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/salmon-kallisto-mtx-to-10x/.shed.yml commit c06e0424fd25356d1a8c172fb92b383fd9d28e90
author ebi-gxa
date Thu, 21 Nov 2019 09:38:48 -0500
parents cd6007b47199
children 60fa6080f86f
line wrap: on
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--- a/salmonKallistoMtxTo10x.xml	Fri Nov 08 08:49:38 2019 -0500
+++ b/salmonKallistoMtxTo10x.xml	Thu Nov 21 09:38:48 2019 -0500
@@ -1,4 +1,4 @@
-<tool id="_salmon_kallisto_mtx_to_10x" name="salmonKallistoMtxTo10x" version="0.0.1+galaxy1">
+<tool id="_salmon_kallisto_mtx_to_10x" name="salmonKallistoMtxTo10x" version="0.0.1+galaxy2">
     <description>Transforms .mtx matrix and associated labels into a format compatible with tools expecting old-style 10X data</description>
     <requirements>
       <requirement type="package">scipy</requirement>
@@ -23,8 +23,8 @@
     </inputs>
 
     <outputs>
-        <data name="genes_out" format="txt" from_work_dir="genes.tsv" label="${tool.name} on ${on_string}: genes"/>
-        <data name="barcodes_out" format="txt" from_work_dir="barcodes.tsv" label="${tool.name} on ${on_string}: barcodes"/>
+        <data name="genes_out" format="tabular" from_work_dir="genes.tsv" label="${tool.name} on ${on_string}: genes"/>
+        <data name="barcodes_out" format="tabular" from_work_dir="barcodes.tsv" label="${tool.name} on ${on_string}: barcodes"/>
         <data name="matrix_out" format="mtx" from_work_dir="matrix.mtx" label="${tool.name} on ${on_string}: matrix" />
     </outputs>