Mercurial > repos > ebi-gxa > scanpy_filter_cells
diff scanpy-filter-cells.xml @ 14:cf3fb754ddde draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 62f47287c7e8449c59a1f1f454852ddc669b1b1e-dirty"
author | ebi-gxa |
---|---|
date | Mon, 07 Sep 2020 14:03:18 +0000 |
parents | 3dcc1629e420 |
children | 7fd39eb52f38 |
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--- a/scanpy-filter-cells.xml Fri Jun 05 08:56:09 2020 -0400 +++ b/scanpy-filter-cells.xml Mon Sep 07 14:03:18 2020 +0000 @@ -1,5 +1,5 @@ <?xml version="1.0" encoding="utf-8"?> -<tool id="scanpy_filter_cells" name="Scanpy FilterCells" version="@TOOL_VERSION@+galaxy10" profile="@PROFILE@" > +<tool id="scanpy_filter_cells" name="Scanpy FilterCells" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@" > <description>based on counts and numbers of genes expressed</description> <macros> <import>scanpy_macros2.xml</import> @@ -79,14 +79,14 @@ <repeat name="parameters"> <param name="name" value="n_genes"/> <param name="min" value="200"/> - <param name="max" value="2500"/> + <param name="max" value="20000"/> </repeat> <repeat name="parameters"> <param name="name" value="n_counts"/> <param name="min" value="0"/> <param name="max" value="1e9"/> </repeat> - <output name="output_h5" file="output.h5" ftype="h5" compare="sim_size"/> + <output name="output_h5" file="filter_cells.h5" ftype="h5" compare="sim_size"/> </test> </tests>