Mercurial > repos > ebi-gxa > scanpy_find_variable_genes

changeset 9:1c59a010bb44 draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit edcca4677d954001b33ad15e22603ea452031d76
author ebi-gxa
date Wed, 11 Mar 2020 06:46:09 -0400
parents 7a68f44c866b
children 710530217502
files scanpy-find-variable-genes.xml scanpy_macros2.xml
diffstat 2 files changed, 6 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/scanpy-find-variable-genes.xml	Thu Feb 20 10:21:14 2020 -0500
+++ b/scanpy-find-variable-genes.xml	Wed Mar 11 06:46:09 2020 -0400
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="scanpy_find_variable_genes" name="Scanpy FindVariableGenes" version="@TOOL_VERSION@+galaxy9" profile="@PROFILE@">
+<tool id="scanpy_find_variable_genes" name="Scanpy FindVariableGenes" version="@TOOL_VERSION@+galaxy10" profile="@PROFILE@">
   <description>based on normalised dispersion of expression</description>
   <macros>
     <import>scanpy_macros2.xml</import>
--- a/scanpy_macros2.xml	Thu Feb 20 10:21:14 2020 -0500
+++ b/scanpy_macros2.xml	Wed Mar 11 06:46:09 2020 -0400
@@ -5,9 +5,11 @@
   <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
 
-1.4.3+galaxy9: Update to scanpy-scripts 0.2.9 (running scanpy ==1.4.3) to address bugfixes in find-variable-genes.
+1.4.3+galaxy10: Update to scanpy-scripts 0.2.10 (running scanpy ==1.4.3) to address bugfixes in run-pca.
 
-1.4.3+galaxy9: Use profile 18.01 for modules.
+1.4.3+galaxy10: Update to scanpy-scripts 0.2.9 (running scanpy ==1.4.3) to address bugfixes in find-variable-genes.
+
+1.4.3+galaxy10: Use profile 18.01 for modules.
 
 1.4.3+galaxy6: Update to scanpy-scripts 0.2.8 (running scanpy ==1.4.3) and wider compatibility with other Galaxy modules. Bug fixes in filtering and plotting improvements.
 
@@ -44,7 +46,7 @@
 
   <xml name="requirements">
     <requirements>
-      <requirement type="package" version="0.2.9">scanpy-scripts</requirement>
+      <requirement type="package" version="0.2.10">scanpy-scripts</requirement>
       <yield/>
     </requirements>
   </xml>