Mercurial > repos > ebi-gxa > scanpy_integrate_mnn

diff scanpy-integrate-mnn.xml @ 6:5bb009f95e03 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit ebe77c8718ec65277f4dc0d71fa5f4c5677df62d-dirty"
author ebi-gxa
date Wed, 05 May 2021 12:11:10 +0000
parents b202e078a83f
children 3ba9371733a2
line wrap: on
line diff
--- a/scanpy-integrate-mnn.xml	Mon Apr 12 14:43:24 2021 +0000
+++ b/scanpy-integrate-mnn.xml	Wed May 05 12:11:10 2021 +0000
@@ -42,6 +42,7 @@
         --svd-mode '${settings.svd_mode}'
     #end if
   #end if
+  @SAVE_MATRIX_OPTS@
 #end if
   @INPUT_OPTS@
   @OUTPUT_OPTS@
@@ -53,6 +54,7 @@
   <inputs>
     <expand macro="input_object_params"/>
     <expand macro="output_object_params"/>
+    <expand macro="save_matrix_params"/>
     <param name="batch_key" type="text" argument="--batch-key" label="The name of the column in adata.obs that differentiates among experiments/batches.">
       <sanitizer>
         <valid initial="string.printable"/>