Mercurial > repos > ebi-gxa > scanpy_multiplet_scrublet

diff scanpy-multiplet-scrublet.xml @ 8:53ce0e336840 draft default tip

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 1161fdc6d874689d9a7a10bbe22b7758b2edc4bf-dirty
author ebi-gxa
date Wed, 15 May 2024 09:40:10 +0000
parents 2f9517a24c73
children
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--- a/scanpy-multiplet-scrublet.xml	Tue Feb 27 16:42:08 2024 +0000
+++ b/scanpy-multiplet-scrublet.xml	Wed May 15 09:40:10 2024 +0000
@@ -114,7 +114,7 @@
 
     Predict cell doublets using a nearest-neighbor classifier of observed transcriptomes and simulated doublets. Works best if the input is a raw (unnormalized) counts matrix from a single sample or a collection of similar samples from the same experiment. This function is a wrapper around functions that pre-process using Scanpy and directly call functions of Scrublet(). 
 
-    This is a wrapper around the Scanpy wrapper for Scrublet- see https://scanpy.readthedocs.io/en/stable/generated/scanpy.external.pp.scrublet.html.
+    This is a wrapper around the Scanpy wrapper for Scrublet- see https://scanpy.readthedocs.io/en/stable/api/generated/scanpy.pp.scrublet.html.
 
     **Note**