Mercurial > repos > ebi-gxa > scanpy_plot_embed

diff scanpy-plot-embedding.xml @ 26:7d5c97823f8b draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit ee197a80b2d591c393e1662854bc119b2ecab11e-dirty
author ebi-gxa
date Tue, 27 Feb 2024 16:42:32 +0000
parents bfb4d298d75f
children
line wrap: on
line diff
--- a/scanpy-plot-embedding.xml	Fri Oct 13 14:08:31 2023 +0000
+++ b/scanpy-plot-embedding.xml	Tue Feb 27 16:42:32 2024 +0000
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="scanpy_plot_embed" name="Scanpy PlotEmbed" version="@TOOL_VERSION@+galaxy93" profile="@PROFILE@">
+<tool id="scanpy_plot_embed" name="Scanpy PlotEmbed" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
   <description>visualise cell embeddings</description>
   <macros>
     <import>scanpy_macros2.xml</import>
@@ -90,7 +90,7 @@
       <param name="basis" value="X_pca"/>
       <param name="color_by" value="louvain"/>
       <param name="use_raw" value="false"/>
-      <output name="output_png" file="plot_embed.png" ftype="png" compare="sim_size"/>
+      <output name="output_png" file="plot_embed.png" ftype="png" compare="sim_size" delta_frac="0.1"/>
     </test>
   </tests>