Mercurial > repos > ebi-gxa > scanpy_plot_embed

diff scanpy-plot-embedding.xml @ 17:9fafbfcdee0d draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit ebe77c8718ec65277f4dc0d71fa5f4c5677df62d-dirty"
author ebi-gxa
date Wed, 05 May 2021 12:12:20 +0000
parents f48cfaa2e515
children a71086d2e55f
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line diff
--- a/scanpy-plot-embedding.xml	Mon Apr 12 14:44:32 2021 +0000
+++ b/scanpy-plot-embedding.xml	Wed May 05 12:12:20 2021 +0000
@@ -89,6 +89,7 @@
       <param name="input_format" value="anndata"/>
       <param name="basis" value="X_pca"/>
       <param name="color_by" value="louvain"/>
+      <param name="use_raw" value="false"/>
       <output name="output_png" file="plot_embed.png" ftype="png" compare="sim_size"/>
     </test>
   </tests>