Mercurial > repos > ebi-gxa > scanpy_plot_embed

diff scanpy-plot-embedding.xml @ 3:b2410da4e381 draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 1d069e25584e436d7628694cb8853a15f1f85604
author ebi-gxa
date Wed, 20 Nov 2019 05:17:27 -0500
parents c63bc0b71865
children 109cfa259d8b
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--- a/scanpy-plot-embedding.xml	Mon Oct 28 05:26:00 2019 -0400
+++ b/scanpy-plot-embedding.xml	Wed Nov 20 05:17:27 2019 -0500
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<tool id="scanpy_plot_embed" name="Scanpy PlotEmbed" version="@TOOL_VERSION@+galaxy0">
+<tool id="scanpy_plot_embed" name="Scanpy PlotEmbed" version="@TOOL_VERSION@+galaxy1">
   <description>visualise cell embeddings</description>
   <macros>
     <import>scanpy_macros2.xml</import>
@@ -23,7 +23,11 @@
   <inputs>
     <expand macro="input_object_params"/>
     <param name="basis" argument="--basis" type="text" label="Name of the embedding to plot"/>
-    <param name="color_by" argument="--color" type="text" label="Color by attributes, comma separated texts"/>
+    <param name="color_by" argument="--color" type="text" label="Color by attributes, comma separated texts">
+      <sanitizer>
+        <valid initial="string.printable"/>
+      </sanitizer>
+    </param>
     <param name="use_raw" argument="--use-raw" type="boolean" checked="true" truevalue="--use-raw" falsevalue="--no-raw" label="Use raw attributes if present"/>
     <param name="legend_loc" argument="--legend-loc" type="select" label="Location of legend">
       <option value="right margin" selected="true">Right margin</option>