Mercurial > repos > ebi-gxa > scanpy_plot_trajectory

comparison scanpy-plot-trajectory.xml @ 24:f489ccdd423c draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 6c9d530aa653101e9e21804393ec11f38cddf027-dirty
author ebi-gxa
date Thu, 16 Feb 2023 13:29:41 +0000
parents 2fe4b4cba312
children 9d746af31fe8
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23:629ed290bf30 24:f489ccdd423c
1 <?xml version="1.0" encoding="utf-8"?> 1 <?xml version="1.0" encoding="utf-8"?>
2 <tool id="scanpy_plot_trajectory" name="Scanpy PlotTrajectory" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@"> 2 <tool id="scanpy_plot_trajectory" name="Scanpy PlotTrajectory" version="@TOOL_VERSION@+galaxy9" profile="@PROFILE@">
3 <description>visualise cell trajectories</description> 3 <description>visualise cell trajectories</description>
4 <macros> 4 <macros>
5 <import>scanpy_macros2.xml</import> 5 <import>scanpy_macros2.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
98 <tests> 98 <tests>
99 <test> 99 <test>
100 <param name="input_obj_file" value="paga.h5"/> 100 <param name="input_obj_file" value="paga.h5"/>
101 <param name="input_format" value="anndata"/> 101 <param name="input_format" value="anndata"/>
102 <param name="output_format" value="anndata"/> 102 <param name="output_format" value="anndata"/>
103 <param name="type" value="paga_compare"/>
104 <output name="output_h5" file="plotted_paga.h5" ftype="h5" compare="sim_size"/> 103 <output name="output_h5" file="plotted_paga.h5" ftype="h5" compare="sim_size"/>
105 <output name="output_png" file="paga_compare.png" ftype="png" compare="sim_size"/> 104 <output name="output_png" file="paga_compare.png" ftype="png" compare="sim_size"/>
106 </test> 105 </test>
107 </tests> 106 </tests>
108 107