Mercurial > repos > ebi-gxa > scanpy_regress_variable

diff scanpy-regress-variable.xml @ 19:59d3ce1cfaa8 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit ebe77c8718ec65277f4dc0d71fa5f4c5677df62d-dirty"
author ebi-gxa
date Wed, 05 May 2021 12:13:12 +0000
parents 8205e95227e4
children 1200b55768ce
line wrap: on
line diff
--- a/scanpy-regress-variable.xml	Mon Apr 12 14:45:25 2021 +0000
+++ b/scanpy-regress-variable.xml	Wed May 05 12:13:12 2021 +0000
@@ -10,6 +10,7 @@
   ln -s '${input_obj_file}' input.h5 &&
   PYTHONIOENCODING=utf-8 scanpy-regress
       --keys '${variable_keys}'
+      @SAVE_MATRIX_OPTS@
       @INPUT_OPTS@
       @OUTPUT_OPTS@
 #else
@@ -25,6 +26,7 @@
         <valid initial="string.printable"/>
       </sanitizer>
     </param>
+    <expand macro="save_matrix_params"/>
   </inputs>
 
   <outputs>