Mercurial > repos > ebi-gxa > scanpy_run_dpt
comparison scanpy-run-dpt.xml @ 4:34f674af79ff draft
planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 400799f99ee36ad12b990b1ccabf4be16a26c003
| author | ebi-gxa |
|---|---|
| date | Mon, 25 Nov 2019 14:39:12 -0500 |
| parents | f57f57c459d8 |
| children | 4df362cd2aff |
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| 3:202e28c59b59 | 4:34f674af79ff |
|---|---|
| 1 <?xml version="1.0" encoding="utf-8"?> | 1 <?xml version="1.0" encoding="utf-8"?> |
| 2 <tool id="scanpy_run_dpt" name="Scanpy DPT" version="@TOOL_VERSION@+galaxy0"> | 2 <tool id="scanpy_run_dpt" name="Scanpy DPT" version="@TOOL_VERSION@+galaxy6"> |
| 3 <description>diffusion pseudotime inference</description> | 3 <description>diffusion pseudotime inference</description> |
| 4 <macros> | 4 <macros> |
| 5 <import>scanpy_macros2.xml</import> | 5 <import>scanpy_macros2.xml</import> |
| 6 </macros> | 6 </macros> |
| 7 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
| 44 <param name="key_added" argument="--key-added" type="text" optional="true" | 44 <param name="key_added" argument="--key-added" type="text" optional="true" |
| 45 label="Additional suffix to the name of the slot to save the calculated trajectory"/> | 45 label="Additional suffix to the name of the slot to save the calculated trajectory"/> |
| 46 </inputs> | 46 </inputs> |
| 47 | 47 |
| 48 <outputs> | 48 <outputs> |
| 49 <data name="output_h5" format="h5" from_work_dir="output.h5" label="${tool.name} on ${on_string}: dpt object"/> | 49 <expand macro="output_data_obj" description="Diffussion pseudotime inference"/> |
| 50 </outputs> | 50 </outputs> |
| 51 | 51 |
| 52 <tests> | 52 <tests> |
| 53 <test> | 53 <test> |
| 54 <param name="input_obj_file" value="diffmap.h5"/> | 54 <param name="input_obj_file" value="diffmap.h5"/> |