comparison scanpy_macros2.xml @ 3:8b4dae3748d3 draft

planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit d13a0a5fceabe51e1a6fe763767b963623aa295a
author ebi-gxa
date Mon, 28 Oct 2019 05:23:07 -0400
parents fe900f147809
children c990e40fbd46
comparison
equal deleted inserted replaced
2:fe900f147809 3:8b4dae3748d3
77 <param name="fig_frame" type="boolean" truevalue="--frameon" falsevalue="--frameoff" checked="false" 77 <param name="fig_frame" type="boolean" truevalue="--frameon" falsevalue="--frameoff" checked="false"
78 label="Show plot frame"/> 78 label="Show plot frame"/>
79 </xml> 79 </xml>
80 80
81 <xml name="export_mtx_params"> 81 <xml name="export_mtx_params">
82 <param name="export_mtx" argument="--export-mtx" type="boolean" truevalue="--export-mtx ./" falsevalue="" checked="false" label="Save normalised data to 10x mtx format" help="If enabled, it will generate in addition to the main output in Loom or AnnData an export in 10x format of the normalised data."/> 82 <param name="export_mtx" argument="--export-mtx" type="boolean" truevalue="--export-mtx ./" falsevalue="" checked="false" label="Save to 10x mtx format" help="If enabled, it will generate in addition to the main output in Loom or AnnData an export in 10x format."/>
83 </xml> 83 </xml>
84 84
85 <xml name="export_mtx_outputs"> 85 <xml name="export_mtx_outputs">
86 <data name="matrix_10x" format="txt" from_work_dir="matrix.mtx" label="${tool.name} on ${on_string}: 10x matrix"> 86 <data name="matrix_10x" format="txt" from_work_dir="matrix.mtx" label="${tool.name} on ${on_string}: 10x matrix">
87 <filter>export_mtx</filter> 87 <filter>export_mtx</filter>