# HG changeset patch
# User ebi-gxa
# Date 1597416266 14400
# Node ID 1543a50e08c9d2b90d3fc9bdc94a42937fb61077
# Parent  bcc0113fa796784913726199abcb51d2093a30c9
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit bb88d0eb9c193518eb0d05321e3458a10212d3ab"

diff -r bcc0113fa796 -r 1543a50e08c9 scmap_scmap_cell.xml
--- a/scmap_scmap_cell.xml	Thu Aug 13 06:15:33 2020 -0400
+++ b/scmap_scmap_cell.xml	Fri Aug 14 10:44:26 2020 -0400
@@ -1,4 +1,4 @@
-<tool id="scmap_scmap_cell" name="Scmap cell projection" version="@TOOL_VERSION@+galaxy0" profile="@PROFILE@">
+<tool id="scmap_scmap_cell" name="Scmap cell projection" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
     <description>searches each cell in a query dataset for the nearest neighbours by cosine distance within a collection of reference datasets.</description>
     <macros>
         <import>scmap_macros.xml</import>
@@ -34,9 +34,9 @@
     </inputs>
     <outputs>
       <data name="output_single_cell_experiment" format="rdata" />
-      <data name="closest_cells_text_file" format="csv" />
-      <data name="closest_cells_similarities_text_file" format="csv" />
-      <data name="closest_cells_clusters_csv" format="csv">
+      <data name="closest_cells_text_file" format="tabular" />
+      <data name="closest_cells_similarities_text_file" format="tabular" />
+      <data name="closest_cells_clusters_csv" format="tabular">
         <filter>cluster_projection['do_cluster_projection']</filter>
       </data>
     </outputs>