# HG changeset patch
# User ebi-gxa
# Date 1589535211 14400
# Node ID b78cdc83a479eaa08304ba8ba4c44b961aae0a68
# Parent  5c94e80e428f43bbc5b2e93e88cd1b9c73f3e243
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 53f809e83bf7784787f78f16dc78d7601231dcfa"

diff -r 5c94e80e428f -r b78cdc83a479 scmap_scmap_cell.xml
--- a/scmap_scmap_cell.xml	Wed May 13 05:31:07 2020 -0400
+++ b/scmap_scmap_cell.xml	Fri May 15 05:33:31 2020 -0400
@@ -1,4 +1,4 @@
-<tool id="scmap_scmap_cell" name="Scmap cell projection" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@">
+<tool id="scmap_scmap_cell" name="Scmap cell projection" version="@TOOL_VERSION@+galaxy3" profile="@PROFILE@">
     <description>searches each cell in a query dataset for the nearest neighbours by cosine distance within a collection of reference datasets.</description>
     <macros>
         <import>scmap_macros.xml</import>
@@ -37,7 +37,7 @@
       <data name="closest_cells_text_file" format="csv" />
       <data name="closest_cells_similarities_text_file" format="csv" />
       <data name="closest_cells_clusters_csv" format="csv">
-        <filter>cluster_projection['do_cluster_projection'] == "true"</filter>
+        <filter>cluster_projection['do_cluster_projection']</filter>
       </data>
     </outputs>
     <tests>