Mercurial > repos > ebi-gxa > scmap_scmap_cluster
diff scmap_scmap_cluster.xml @ 10:0a1dabbae5fa draft default tip
planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 8350493268ce3ced12b1133b9b0f734a288deb75
| author | ebi-gxa |
|---|---|
| date | Tue, 23 Apr 2024 07:48:14 +0000 |
| parents | a0da1d3155dd |
| children |
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--- a/scmap_scmap_cluster.xml Fri Nov 27 13:44:34 2020 +0000 +++ b/scmap_scmap_cluster.xml Tue Apr 23 07:48:14 2024 +0000 @@ -13,15 +13,24 @@ <param name="threshold" type="float" label="Threshold" value="0.7" help="Threshold on similarity (or probability for SVM and RF)." /> </inputs> <outputs> - <data name="output_single_cell_experiment" format="rdata" /> - <data name="output_txt" format="tabular" /> + <data name="output_single_cell_experiment" format="rdata" label="${tool.name} on ${on_string}: RDS object"/> + <data name="output_txt" format="tabular" label="${tool.name} on ${on_string}: table"/> </outputs> <tests> <test> <param name="index_single_cell_experiment" value="index_cluster.rds" ftype="rdata"/> <param name="project_single_cell_experiment" value="test_sce_processed.rds" ftype="rdata"/> - <output name="output_single_cell_experiment" file="project_cluster.rds" compare="sim_size"/> - <output name="output_txt" file="project_cluster.tsv" compare="sim_size"/> + <output name="output_single_cell_experiment"> + <assert_contents> + <has_size value="6100k" delta="500k"/> + </assert_contents> + </output> + <output name="output_txt"> + <assert_contents> + <has_n_lines n="91"/> + <has_text text="zygote"/> + </assert_contents> + </output> </test> </tests> <help><![CDATA[