Mercurial > repos > ebi-gxa > scpred_preprocess_data

comparison scpred_preprocess_data.xml @ 2:82087ae9fe4e draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 2f718294665c9d01702ad765904972f463154cd6"
author ebi-gxa
date Fri, 01 May 2020 10:13:02 -0400
parents 03b45c148df7
children ecfdb9347edb
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1:03b45c148df7 2:82087ae9fe4e
1 <tool id="scpred_preprocess_data" name="Scpred pre-process" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> 1 <tool id="scpred_preprocess_data" name="Scpred pre-process" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@">
2 <description>Pre-process input dataset (no train/test split)</description> 2 <description>Pre-process input dataset (no train/test split)</description>
3 <macros> 3 <macros>
4 <import>scpred_macros.xml</import> 4 <import>scpred_macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
15 #end if 15 #end if
16 16
17 ]]></command> 17 ]]></command>
18 <inputs> 18 <inputs>
19 <param type="data" name="input_sce_object" label="SCE object containing expression data" format="rdata" help="File with serialized SingleCellExperiment object that contains expression matrix" /> 19 <param type="data" name="input_sce_object" label="SCE object containing expression data" format="rdata" help="File with serialized SingleCellExperiment object that contains expression matrix" />
20 <param type="text" name="norm_counts_slot" value="normcounts" label="Normalised counts slot" help="Slot containing normalised counts in input SCE object" /> 20 <param type="text" name="norm_counts_slot" optional="true" value="normcounts" label="Normalised counts slot" help="Slot containing normalised counts in input SCE object" />
21 </inputs> 21 </inputs>
22 <outputs> 22 <outputs>
23 <data name="output_mat_object" format="rdata" /> 23 <data name="output_mat_object" format="rdata" />
24 <data name="output_labels" format="txt" /> 24 <data name="output_labels" format="txt" />
25 </outputs> 25 </outputs>