Mercurial > repos > ebi-gxa > scpred_train_model

comparison scpred_macros.xml @ 5:33fa4949e080 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit bb88d0eb9c193518eb0d05321e3458a10212d3ab"
author ebi-gxa
date Fri, 14 Aug 2020 10:56:40 -0400
parents 03d1ed93e523
children b3c543769af9
comparison
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4:03d1ed93e523 5:33fa4949e080
2 <token name="@TOOL_VERSION@">1.0.0</token> 2 <token name="@TOOL_VERSION@">1.0.0</token>
3 <token name="@HELP@">More information can be found at https://joseah.github.io/post/introduction-to-scpred/</token> 3 <token name="@HELP@">More information can be found at https://joseah.github.io/post/introduction-to-scpred/</token>
4 <token name="@PROFILE@">18.01</token> 4 <token name="@PROFILE@">18.01</token>
5 <xml name="requirements"> 5 <xml name="requirements">
6 <requirements> 6 <requirements>
7 <requirement type="package" version="0.0.8">scpred-cli</requirement> 7 <requirement type="package" version="0.0.9">scpred-cli</requirement>
8 <yield/> 8 <yield/>
9 </requirements> 9 </requirements>
10 </xml> 10 </xml>
11 <xml name="version"> 11 <xml name="version">
12 <version_command><![CDATA[ 12 <version_command><![CDATA[
13 echo $(R --version | grep version | grep -v GNU)", scpred version" $(R --vanilla --slave -e "library(scpred); cat(sessionInfo()\$otherPkgs\$scpred\$Version)" 2> /dev/null | grep -v -i "WARNING: ") 13 echo $(R --version | grep version | grep -v GNU)", scpred version" $(R --vanilla --slave -e "library(scpred); cat(sessionInfo()\$otherPkgs\$scpred\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
14 ]]></version_command> 14 ]]></version_command>
15 </xml> 15 </xml>
16 <token name="@VERSION_HISTORY@"><![CDATA[ 16 <token name="@VERSION_HISTORY@"><![CDATA[
17 **Version history** 17 **Version history**
18 1.0.1+galaxy0: Update output format from csv to tsv
18 1.0.0+galaxy0: Initilal contribution. Andrey Solovyev, Expression Atlas team https://www.ebi.ac.uk/gxa/home at EMBL-EBI https://www.ebi.ac.uk/. 19 1.0.0+galaxy0: Initilal contribution. Andrey Solovyev, Expression Atlas team https://www.ebi.ac.uk/gxa/home at EMBL-EBI https://www.ebi.ac.uk/.
19 ]]></token> 20 ]]></token>
20 <xml name="citations"> 21 <xml name="citations">
21 <citations> 22 <citations>
22 <citation type="bibtex"> 23 <citation type="bibtex">