# HG changeset patch # User ebi-gxa # Date 1586341727 14400 # Node ID b17acf485397c62f9b4ab3c37fcf9cfa8e617356 "planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 6ea13bbd7294b94201a5d776307b3f0742847db1" diff -r 000000000000 -r b17acf485397 scpred_macros.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/scpred_macros.xml Wed Apr 08 06:28:47 2020 -0400 @@ -0,0 +1,46 @@ + + 1.0.0 + More information can be found at https://joseah.github.io/post/introduction-to-scpred/ + 18.01 + + + scpred-cli + + + + + /dev/null | grep -v -i "WARNING: ") + ]]> + + + + + + @article{Alquicira-Hernandez2019, + author = {Alquicira-Hernandez, Jose and Sathe, Anuja and Ji, Hanlee P and Nguyen, Quan and Powell, Joseph E}, + journal = {Genome Biology}, + title = {{scPred: accurate supervised method for cell-type classification from single-cell RNA-seq data}}, + url = {https://doi.org/10.1186/s13059-019-1862-5}, + year = {2019} + } + + + @misc{githubscpred-cli.git, + author = {Andrey Solovyev, EBI Gene Expression Team}, + year = {2019}, + title = {scpred-cli: command line interface for ScPred tool}, + publisher = {GitHub}, + journal = {GitHub repository}, + url = {https://github.com/ebi-gene-expression-group/scpred-cli.git}, + } + + + + + + + diff -r 000000000000 -r b17acf485397 scpred_train_model.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/scpred_train_model.xml Wed Apr 08 06:28:47 2020 -0400 @@ -0,0 +1,30 @@ + + Train classification model + + scpred_macros.xml + + + + + + + + + + + + + + + + + + + +