Mercurial > repos > ebi-gxa > seurat_find_clusters

annotate extra/macro_mapper_seurat.yaml @ 6:d541e9e62beb draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
author ebi-gxa
date Sat, 02 Mar 2024 10:42:24 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
6
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
1 ---
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
2 - option_group:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
3 - input-object-file
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
4 - input-format
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
5 pre_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
6 - INPUT_OBJ_PREAMBLE
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
7 post_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
8 - INPUT_OBJECT
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
9 input_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
10 - input_object_params
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
11 - option_group:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
12 - output-object-file
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
13 - output-format
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
14 post_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
15 - OUTPUT_OBJECT
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
16 input_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
17 - output_object_params
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
18 output_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
19 - output_files
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
20 - option_group:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
21 - input-object-files
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
22 - input-format
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
23 pre_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
24 - INPUT_OBJS_PREAMBLE
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
25 post_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
26 - INPUT_OBJECTS
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
27 input_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
28 - input_object_params:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
29 multiple: true
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
30 - option_group:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
31 - reference-object-files
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
32 - reference-format
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
33 pre_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
34 - REFERENCE_OBJS_PREAMBLE
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
35 post_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
36 - REFERENCE_OBJECTS
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
37 input_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
38 - input_object_params:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
39 varname: reference
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
40 multiple: true
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
41 optional: true
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
42 - option_group:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
43 - reference-object-file
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
44 - reference-format
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
45 pre_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
46 - REFERENCE_OBJ_PREAMBLE
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
47 post_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
48 - REFERENCE_OBJECT
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
49 input_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
50 - input_object_params:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
51 varname: reference
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
52 - option_group:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
53 - anchors-object-file
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
54 - anchors-format
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
55 pre_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
56 - ANCHORS_OBJ_PREAMBLE
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
57 post_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
58 - ANCHORS_OBJECT
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
59 input_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
60 - input_object_params:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
61 varname: anchors
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
62 - option_group:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
63 - query-object-file
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
64 - query-format
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
65 pre_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
66 - QUERY_OBJ_PREAMBLE
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
67 post_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
68 - QUERY_OBJECT
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
69 input_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
70 - input_object_params:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
71 varname: query
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
72 - option_group:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
73 - plot-out
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
74 post_command_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
75 - OUTPUT_PLOT
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
76 output_declaration_macros:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
77 - plot_output_files_format:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
78 format: png
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
79 - plot_output_files_format:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
80 format: pdf
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
81 - plot_output_files_format:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
82 format: eps
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
83 - plot_output_files_format:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
84 format: jpg
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
85 - plot_output_files_format:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
86 format: ps
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
87 - plot_output_files_format:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
88 format: tiff
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
89 - plot_output_files_format:
d541e9e62beb planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6
ebi-gxa
parents:
diff changeset
90 format: svg