Mercurial > repos > ebi-gxa > seurat_find_clusters

comparison seurat_find_clusters.xml @ 4:8ed848ef86fd draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
author ebi-gxa
date Fri, 27 Nov 2020 13:47:46 +0000
parents 0715bcb14547
children eefaffdcd441
comparison
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3:11a008daee84 4:8ed848ef86fd
76 </outputs> 76 </outputs>
77 77
78 <tests> 78 <tests>
79 <!-- Ensure count matrix input works --> 79 <!-- Ensure count matrix input works -->
80 <test> 80 <test>
81 <param name="input" ftype="rdata" value="out_runpca.rds"/> 81 <param name="rds_seurat_file" ftype="rdata" value="neighbours_seurat.rds"/>
82 <output name="rds_seurat_file" ftype="rdata" value="out_findclust.rds" compare="sim_size"/> 82 <output name="rds_seurat_file" ftype="rdata" value="cluster_seurat.rds" compare="sim_size"/>
83 <output name="output_tab" value="clusters.txt" compare="sim_size" delta="1000000" />
83 </test> 84 </test>
84 </tests> 85 </tests>
85 <help><![CDATA[ 86 <help><![CDATA[
86 .. class:: infomark 87 .. class:: infomark
87 88