Mercurial > repos > ebi-gxa > seurat_find_markers

diff seurat_find_markers.xml @ 4:a1842dbe01cd draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
author ebi-gxa
date Fri, 27 Nov 2020 13:48:02 +0000
parents 4039a99ae846
children 3dd20b758756
line wrap: on
line diff
--- a/seurat_find_markers.xml	Sat Jul 11 08:42:22 2020 -0400
+++ b/seurat_find_markers.xml	Fri Nov 27 13:48:02 2020 +0000
@@ -79,8 +79,8 @@
 
     <tests>
         <test>
-            <param name="input" ftype="rdata" value="out_runtsne.rds"/>
-            <output name="output" ftype="txt" value="out_findmark.txt"/>
+            <param name="rds_seurat_file" ftype="rdata" value="cluster_seurat.rds"/>
+            <output name="output" value="markers.csv" compare="sim_size" delta="1000000"/>
         </test>
     </tests>
     <help><![CDATA[