Mercurial > repos > ebi-gxa > seurat_find_neighbours
diff seurat_find_neighbours.xml @ 3:ab622ffd7c7f draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
author | ebi-gxa |
---|---|
date | Fri, 27 Nov 2020 13:48:19 +0000 |
parents | bba8b14264c2 |
children | 99d628557c47 |
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--- a/seurat_find_neighbours.xml Sat Jul 11 08:42:53 2020 -0400 +++ b/seurat_find_neighbours.xml Fri Nov 27 13:48:19 2020 +0000 @@ -86,8 +86,10 @@ <tests> <test> - <param name="input" ftype="rdata" value="seurat.rds"/> - <output name="rds_seurat_file" ftype="rdata" value="out_filter.rds" compare="sim_size"/> + <param name="rds_seurat_file" ftype="rdata" value="pca_seurat.rds"/> + <param name="compute_snn" value="True" /> + <param name="reduction" value="pca" /> + <output name="rds_seurat_file" ftype="rdata" value="neighbours_seurat.rds" compare="sim_size" delta="10000000" /> </test> </tests> <help><![CDATA[