Mercurial > repos > ebi-gxa > seurat_run_tsne
diff seurat_run_tsne.xml @ 5:8d9ceaec2c7f draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 355bb52d2e9d170b1db237e649657cc14e0a047a"
author | ebi-gxa |
---|---|
date | Fri, 04 Mar 2022 07:27:38 +0000 |
parents | 2d294978b152 |
children |
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--- a/seurat_run_tsne.xml Fri Nov 27 13:49:39 2020 +0000 +++ b/seurat_run_tsne.xml Fri Mar 04 07:27:38 2022 +0000 @@ -1,4 +1,4 @@ -<tool id="seurat_run_tsne" name="Seurat RunTSNE" version="@SEURAT_VERSION@+galaxy0"> +<tool id="seurat_run_tsne" name="Seurat RunTSNE" profile="18.01" version="@SEURAT_VERSION@+galaxy0"> <description>run t-SNE dimensionality reduction</description> <macros> <import>seurat_macros.xml</import> @@ -66,8 +66,12 @@ <tests> <test> - <param name="rds_seurat_file" ftype="rdata" value="pca_seurat.rds"/> - <output name="rds_seurat_file" ftype="rdata" value="tsne_seurat.rds" compare="sim_size" delta="1000000" /> + <param name="rds_seurat_file" ftype="rdata" value="E-MTAB-6077-3k_features_90_cells-clusters.rds"/> + <output name="rds_seurat_file" ftype="rdata" > + <assert_contents> + <has_size value="5067150" delta="200000"/> + </assert_contents> + </output> </test> </tests> <help><![CDATA[