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comparison cb_ivr.xml @ 1:b67730406f1b draft

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planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
author ecology
date Wed, 04 Jan 2023 13:21:30 +0000
parents 8c6142630659
children bcbad4f83dec
comparison
equal deleted inserted replaced
0:8c6142630659 1:b67730406f1b
2 <description>indicator</description> 2 <description>indicator</description>
3 <macros> 3 <macros>
4 <import>macro.xml</import> 4 <import>macro.xml</import>
5 </macros> 5 </macros>
6 <expand macro="cb_requirements"> 6 <expand macro="cb_requirements">
7 <requirement type="package" version="2.16">r-rmarkdown</requirement> 7 <requirement type="package" version="2.19">r-rmarkdown</requirement>
8 <requirement type="package" version="0.2.4">r-officedown</requirement> 8 <requirement type="package" version="0.2.4">r-officedown</requirement>
9 <requirement type="package" version="1.3.2">r-tidyverse</requirement> 9 <requirement type="package" version="1.3.2">r-tidyverse</requirement>
10 <requirement type="package" version="0.4.4">r-officer</requirement> 10 <requirement type="package" version="0.5.0">r-officer</requirement>
11 <requirement type="package" version="0.8.1">r-flextable</requirement> 11 <requirement type="package" version="0.8.3">r-flextable</requirement>
12 <requirement type="package" version="3.3.6">r-ggplot2</requirement> 12 <requirement type="package" version="3.4">r-ggplot2</requirement>
13 </expand> 13 </expand>
14 <required_files> 14 <required_files>
15 <include type="literal" path="test-data/champbloc_ivr.csv"/> 15 <include type="literal" path="test-data/champbloc_ivr.csv"/>
16 <include type="literal" path="test-data/ficheterrain.csv"/> 16 <include type="literal" path="test-data/ficheterrain.csv"/>
17 <include type="literal" path="CB_ivr.tif"/> 17 <include type="literal" path="CB_ivr.tif"/>
35 <inputs> 35 <inputs>
36 <expand macro="cb_input"/> 36 <expand macro="cb_input"/>
37 <param name="input_data" type="data" format="data" label="Input champbloc_ivr.csv"/> 37 <param name="input_data" type="data" format="data" label="Input champbloc_ivr.csv"/>
38 </inputs> 38 </inputs>
39 <outputs> 39 <outputs>
40 <data name="output_ivr" from_work_dir="ivr_val_qu.RDS" format="Rdata" label="IVR Rdata"/> 40 <data name="output_ivr" from_work_dir="ivr_val_qu.RDS" format="rdata" label="IVR Rdata"/>
41 <collection type="list" name="plots" label="IVR plot"> 41 <collection type="list" name="plots" label="IVR plot">
42 <discover_datasets pattern="(?P&lt;designation&gt;.+)\.png" visible="false" format="png"/> 42 <discover_datasets pattern="(?P&lt;designation&gt;.+)\.png" visible="false" format="png"/>
43 </collection> 43 </collection>
44 <collection type="list" name="output_report" label="Reports"> 44 <collection type="list" name="output_report" label="Reports">
45 <discover_datasets pattern="(?P&lt;designation&gt;.+)\.docx" directory="results" visible="false" format="docx"/> 45 <discover_datasets pattern="(?P&lt;designation&gt;.+)\.docx" directory="results" visible="false" format="docx"/>