Mercurial > repos > ecology > ecology_presence_abs_abund
changeset 0:f9bce5117161 draft
"planemo upload for repository https://github.com/Marie59/Data_explo_tools commit 2f883743403105d9cac6d267496d985100da3958"
author | ecology |
---|---|
date | Tue, 27 Jul 2021 16:56:39 +0000 |
parents | |
children | 4ed07d2d442b |
files | LICENSE.md graph_homogeneity_normality.r graph_link_var.r graph_pres_abs_abund.r graph_stat_presence_abs.r macro.xml presence_abs_abund.xml test-data/Data.tabular test-data/Missing_species.txt test-data/Reel_life_survey_fish_modif.tabular test-data/Reel_life_survey_fish_modif2.tabular test-data/data_frenchbbs.tabular test-data/levene.txt test-data/species.txt test-data/test_bbs2.txt test-data/test_fish2.tabular test-data/test_value_fish2.txt |
diffstat | 17 files changed, 2894 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/graph_homogeneity_normality.r Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,130 @@ +#Rscript + +####################################### +## Homogeneity and normality ## +####################################### + +#####Packages : car +# ggplot2 +# ggpubr +# Cowplot + +#####Load arguments + +args <- commandArgs(trailingOnly = TRUE) + +if (length(args) == 0) { + stop("This tool needs at least one argument") +}else{ + table <- args[1] + hr <- args[2] + date <- as.numeric(args[3]) + spe <- as.numeric(args[4]) + var <- as.numeric(args[5]) +} + +if (hr == "false") { + hr <- FALSE +}else{ + hr <- TRUE +} + +#####Import data +data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8") +data <- na.omit(data) +coldate <- colnames(data)[date] +colspe <- colnames(data)[spe] +colvar <- colnames(data)[var] + +#####Your analysis + +####Homogeneity of the variance#### + +##Test of Levene## +testlevene <- function(data, col1, col2) { + data[, col1] <- as.numeric(data[, col1]) + data[, col2] <- as.factor(data[, col2]) + tb_levene <- car::leveneTest(y = data[, col1], group = data[, col2]) + + return(tb_levene) + } +levene <- capture.output(testlevene(data = data, col1 = colvar, col2 = colspe)) + +cat("\nwrite table with levene test. \n--> \"", paste(levene, "\"\n", sep = ""), file = "levene.txt", sep = "", append = TRUE) + +##Two boxplots to visualize it## + +homog_var <- function(data, col1, col2, col3, mult) { + data[, col1] <- as.factor(data[, col1]) + if (mult) { + for (spe in unique(data[, col2])) { + data_cut <- data[data[, col2] == spe, ] + graph_2 <- ggplot2::ggplot(data_cut, ggplot2::aes_string(x = col1, y = col3, color = col1)) + + ggplot2::geom_boxplot() + + ggplot2::theme(legend.position = "none", axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1), panel.background = ggplot2::element_rect(fill = "#d9d4c5", colour = "#d9d4c5", linetype = "solid"), + panel.grid.major = ggplot2::element_line(linetype = "solid", colour = "white"), + panel.grid.minor = ggplot2::element_line(linetype = "solid", colour = "white")) + + ggplot2::ggsave(paste("Homogeneity_of_", spe, ".png"), graph_2, width = 16, height = 9, units = "cm") + } + }else{ + graph_1 <- ggplot2::ggplot(data, ggplot2::aes_string(x = col1, y = col3, color = col1)) + + ggplot2::geom_boxplot() + + ggplot2::theme(legend.position = "none", axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1)) + + #Put multiple panels + graph_2 <- graph_1 + ggplot2::facet_grid(rows = ggplot2::vars(data[, col2]), scales = "free") + + ggplot2::theme(panel.background = ggplot2::element_rect(fill = "#d9d4c5", colour = "#d9d4c5", linetype = "solid"), + panel.grid.major = ggplot2::element_line(linetype = "solid", colour = "white"), + panel.grid.minor = ggplot2::element_line(linetype = "solid", colour = "white")) + + ggplot2::ggsave("Homogeneity.png", graph_2, width = 16, height = 9, units = "cm") + } +} + +####Normality of the distribution#### +# Kolmogorov-Smirnov test + +ks <- capture.output(ks.test(x = data[, var], y = "pnorm", alternative = "two.sided")) + +cat("\nwrite table with Kolmogorov-Smirnov test. \n--> \"", paste(ks, "\"\n", sep = ""), file = "ks.txt", sep = "", append = TRUE) + +#Histogramm with distribution line +graph_hist <- function(data, var1) { + graph_hist <- ggplot2::ggplot(data) + + ggplot2::geom_histogram(ggplot2::aes_string(x = var1), binwidth = 2, color = "black", fill = "white") + + ggplot2::geom_density(ggplot2::aes_string(var1), alpha = 0.12, fill = "red") + + ggplot2::ggtitle("Distribution histogram") + +return(graph_hist) +} + +#Add the mean dashed line +add_mean <- function(graph, var1) { + graph_mean <- graph + ggplot2::geom_vline(xintercept = mean(data[, var1]), + color = "midnightblue", linetype = "dashed", size = 1) + +return(graph_mean) +} + +#Adding a QQplot +graph_qqplot <- function(data, var1) { + graph2 <- ggpubr::ggqqplot(data, var1, color = "midnightblue") + ggplot2::ggtitle("Q-Q plot") + +return(graph2) +} + +#On suppose que les données sont distribuées normalement lorsque les points suivent approximativement la ligne de référence à 45 degrés. + +graph_fin <- function(graph1, graph2) { + graph <- cowplot::plot_grid(graph1, graph2, ncol = 2, nrow = 1) + + ggplot2::ggsave("Normal_distribution.png", graph, width = 10, height = 7, units = "cm") +} + +mult <- ifelse(length(unique(data[, colspe])) == 2, FALSE, TRUE) +homog_var(data, col1 = coldate, col2 = colspe, col3 = colvar, mult = mult) + +graph_hist1 <- graph_hist(data, var1 = colvar) +graph_mean <- add_mean(graph = graph_hist1, var1 = colvar) +graph_fin(graph1 = graph_mean, graph2 = graph_qqplot(data, var1 = colvar))
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/graph_link_var.r Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,296 @@ +#Rscript + +################################################ +## Link between variables and themselves ## +################################################ + +#####Packages : ggplot2 +# Cowplot +# Car +# faraway +# dplyr +# GGally +# FactoMiner +# factoextra +# ggcorrplot + +#####Load arguments + +args <- commandArgs(trailingOnly = TRUE) + +if (length(args) == 0) { + stop("This tool needs at least one argument") +}else{ + table <- args[1] + hr <- args[2] + colli <- as.logical(args[3]) + vif <- as.logical(args[4]) + pca <- as.logical(args[5]) + interr <- as.logical(args[6]) + auto <- as.logical(args[7]) + spe <- as.numeric(args[8]) + col <- as.numeric(strsplit(args[9], ",")[[1]]) + var <- as.numeric(args[10]) + var2 <- as.numeric(args[11]) + var4 <- as.numeric(args[12]) +} + +if (hr == "false") { + hr <- FALSE +}else{ + hr <- TRUE +} + +if (length(col) == 1) { +stop("Please select two or more numerical columns") +} + +#####Import data +data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8") +if (vif | pca) { +data_active <- data[col] +#Define the active individuals and the active variables for the PCA +} + +if (colli | interr) { +colspe <- colnames(data)[spe] +} + +if (colli) { +data_num <- data[col] +data_num$species <- data[, spe] +data_num <- data_num[grep("^$", data_num$spe, invert = TRUE), ] +} + +if (interr | auto) { +colvar <- colnames(data)[var] +} + +if (interr) { +colvar2 <- colnames(data)[var2] +colvar4 <- colnames(data)[var4] +} + +#####Your analysis + +####Independence of the observations#### + +acf_tb <- function(data, var) { +obj <- acf(data[, var], na.action = na.pass) + return(obj) +} + +acf_df <- function(data, var) { + +tb <- data.frame(acf = acf_tb(data, var)$acf, lag = acf_tb(data, var)$lag) + + return(tb) # Lag: intervalle temporel entre mesures, fréquence à laquelle on mesure l'auto corrélation. +# ACF: indépendance temporelle +} + +autocorr <- function(var1, var2) { + cat("\nACF\n", var2$acf, file = "acf.txt", fill = 1, append = TRUE) + graph <- ggplot2::ggplot() + + ggplot2::geom_bar(ggplot2::aes(x = var2$lag, y = var2$acf), stat = "identity", position = "identity", fill = "midnightblue") + + ggplot2::geom_hline(mapping = ggplot2::aes(yintercept = qnorm((1 + 0.95) / 2) / sqrt(var1$n.used)), + linetype = "dashed") + # calcul interval de confiance à 95% sans correction du bruit blanc. + ggplot2::geom_hline(mapping = ggplot2::aes(yintercept = -qnorm((1 + 0.95) / 2) / sqrt(var1$n.used)), linetype = "dashed") + ggplot2::labs(title = "Autocorrelation") + ggplot2::xlab("lag") + ggplot2::ylab("acf") + ggplot2::theme(plot.title = ggplot2::element_text(hjust = 0.5)) + + ggplot2::ggsave("autocorrelation.png", graph) +} + +####Interractions#### + +graph <- function(data, var1, var2, var3) { + graph <- ggplot2::ggplot(data, ggplot2::aes_string(x = var1, y = var2, group = var3, color = var3)) + + ggplot2::geom_point() + + ggplot2::geom_smooth(method = lm, se = FALSE) + + ggplot2::theme(plot.title = ggplot2::element_text(color = "black", size = 12, face = "bold")) + +return(graph) +} + +# Put multiple panels +interraction <- function(data, var1, var2, var3, var4) { + cat("\nSpecies\n", spe, file = "Species.txt", fill = 1, append = TRUE) + if (mult1) { + for (spe in unique(data[, var3])) { + data_cut <- data[data[, var3] == spe, ] + mult_graph <- graph(data_cut, var1, var2, var3) + ggplot2::facet_grid(cols = ggplot2::vars(data_cut[, var4]), scales = "free") + + cowplot::background_grid(major = "xy", minor = "none") + + cowplot::panel_border() + ggplot2::ggtitle("Interactions") + + ggplot2::ggsave(paste("interaction_of_", spe, ".png"), mult_graph, width = 10, height = 7) + } + }else{ + mult_graph <- graph(data, var1, var2, var3) + ggplot2::facet_grid(rows = ggplot2::vars(data[, var3]), cols = ggplot2::vars(data[, var4]), scales = "free") + + cowplot::background_grid(major = "xy", minor = "none") + + cowplot::panel_border() + ggplot2::ggtitle("Interactions") + + ggplot2::ggsave("interraction.png", mult_graph) + } +} + +####Collinearity among covariates#### +# Create the plots + +coli <- function(data, var) { + if (mult2) { + cat("\nThere is not enough data on these species they appear too few times in the tabular-file\n", file = "Data.txt", fill = 1, append = TRUE) + for (spe in unique(data$species)) { + nb_spe <- sum(data$species == spe) + if (nb_spe <= 2) { + cat(spe, file = "Data.txt", fill = 1, append = TRUE) + }else{ + data_cut <- data[data$species == spe, ] + nb <- ncol(data_cut) + data_num <- data_cut[, -nb] + graph <- GGally::ggpairs(data_num, ggplot2::aes(color = data_cut$species), + lower = list(continuous = "points"), axisLabels = "internal") + + ggplot2::ggsave(paste0("collinarity_of_", spe, ".png"), graph, width = 20, height = 15) + } + } + + }else{ + nb <- ncol(data) + data_cut <- data[, -nb] + graph <- GGally::ggpairs(data_cut, ggplot2::aes(color = data[, var]), + lower = list(continuous = "points"), axisLabels = "internal") + + ggplot2::scale_colour_manual(values = c("#00AFBB", "#E7B800", "#FC4E07")) + + ggplot2::scale_fill_manual(values = c("#00AFBB", "#E7B800", "#FC4E07")) + + ggplot2::ggsave("collinarity.png", graph) + } +} + +####PCA method#### + +plot_pca <- function(data) { + #Correlation circle + graph_corr <- factoextra::fviz_pca_var(active_data(data), col.var = "cos2", + gradient.cols = c("#00AFBB", "#E7B800", "#FC4E07"), + repel = TRUE #Avoid text overlap + ) + ggplot2::ggsave("Pca_circle.png", graph_corr) +} + +plot_qual <- function(data) { + #PCA results for variables + var <- factoextra::get_pca_var(active_data(data)) + + #representation quality + graph_quality <- ggcorrplot::ggcorrplot(var$cos2[!apply(var$cos2, 1, anyNA), ], method = "circle", + ggtheme = ggplot2::theme_gray, + colors = c("#00AFBB", "#E7B800", "#FC4E07")) + + ggplot2::ggsave("Pca_quality.png", graph_quality) +} + +#### Variance inflation factor #### + +myvif <- function(mod) { + v <- vcov(mod) + assign <- attributes(model.matrix(mod))$assign + if (names(coefficients(mod)[1]) == "(Intercept)") { + v <- v[-1, -1] + assign <- assign[-1] + } else warning("No intercept: vifs may not be sensible.") + terms <- labels(terms(mod)) + n_terms <- length(terms) + if (n_terms < 2) stop("The model contains fewer than 2 terms") + if (length(assign) > dim(v)[1]) { + diag(tmp_cor) <- 0 + if (any(tmp_cor == 1.0)) { + return("Sample size is too small, 100% collinearity is present") + } else { + return("Sample size is too small") + } + } + r <- cov2cor(v) + detr <- det(r) + result <- matrix(0, n_terms, 3) + rownames(result) <- terms + colnames(result) <- c("GVIF", "Df", "GVIF^(1/2Df)") + for (term in 1:n_terms) { + subs <- which(assign == term) + result[term, 1] <- det(as.matrix(r[subs, subs])) * det(as.matrix(r[-subs, -subs])) / detr + result[term, 2] <- length(subs) + } + if (all(result[, 2] == 1)) { + result <- data.frame(GVIF = result[, 1]) + } else { + result[, 3] <- result[, 1] ^ (1 / (2 * result[, 2])) + } + invisible(result) +} +corvif1 <- function(dataz) { + dataz <- as.data.frame(dataz) + #correlation part + tmp_cor <- cor(dataz, use = "complete.obs") + return(tmp_cor) +} +corvif2 <- function(dataz) { + dataz <- as.data.frame(dataz) + #vif part + form <- formula(paste("fooy ~ ", paste(strsplit(names(dataz), " "), collapse = " + "))) + dataz <- data.frame(fooy = 1, dataz) + lm_mod <- lm(form, dataz) + + return(myvif(lm_mod)) +} + +#Autocorrelation +if (auto) { +obj1 <- acf_tb(data, var = colvar) +obj2 <- acf_df(data, var = colvar) +autocorr(var1 = obj1, var2 = obj2) +} + +if (interr) { +#Interractions +mult1 <- ifelse(length(unique(data[, colspe])) <= 6, FALSE, TRUE) +interraction(data, var1 = colvar, var2 = colvar2, var3 = colspe, var4 = colvar4) +} + +#Collinearity +if (colli) { +mult2 <- ifelse(length(unique(data[, spe])) < 3, FALSE, TRUE) +coli(data = data_num, var = spe) +} + +#PCA +if (pca) { +active_data <- function(data) { + #Calcul of PCA for the active data + res_pca <- FactoMineR::PCA(data, graph = FALSE) + +return(res_pca) +} + +#eigenvalue +eig_val <- capture.output(factoextra::get_eigenvalue(active_data(data_active))) + +cat("\nwrite table with eigenvalue. \n--> \"", paste(eig_val, "\"\n", sep = ""), file = "valeurs.txt", sep = "", append = TRUE) + +plot_pca(data_active) +plot_qual(data_active) +} + +#VIF +if (vif) { +#Compute 2 tables# +tb_corr <- as.data.frame(corvif1(dataz = data_active)) +tb_corr <- cbind(x = rownames(tb_corr), tb_corr) +tb_vif <- corvif2(dataz = data_active) + +write.table(tb_corr, "corr.tabular", row.names = FALSE, quote = FALSE, sep = "\t", dec = ".", fileEncoding = "UTF-8") + +if (all(is.na(tb_vif))) { + tb_vif <- NULL + cat("Vif couldn't be calculated, selected data isn't correlated") +}else{ +write.table(tb_vif, "vif.tabular", row.names = FALSE, quote = FALSE, sep = "\t", dec = ".", fileEncoding = "UTF-8") +} +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/graph_pres_abs_abund.r Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,195 @@ +#Rscript + +######################################################### +## Presence abscence and abundance in environment ## +######################################################### + +#####Packages : ggplot2 +# vegan + +#####Load arguments + +args <- commandArgs(trailingOnly = TRUE) + +if (length(args) < 5) { + stop("This tool needs at least 5 arguments") +}else{ + table <- args[1] + hr <- args[2] + abundance <- as.logical(args[3]) + presabs <- as.logical(args[4]) + rarefaction <- as.logical(args[5]) + lat <- as.numeric(args[6]) + long <- as.numeric(args[7]) + ind <- as.character(args[8]) + loc <- as.numeric(args[9]) + num <- as.character(args[10]) + spe <- as.numeric(args[11]) + abond <- as.numeric(args[12]) +} + +if (hr == "false") { + hr <- FALSE +}else{ + hr <- TRUE +} + +#####Import data +data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8") + +if (abundance) { +collat <- colnames(data)[lat] +collong <- colnames(data)[long] +} + +if (presabs) { +colloc <- colnames(data)[loc] +} + +if (presabs | rarefaction | abundance) { +colabond <- colnames(data)[abond] +colspe <- colnames(data)[spe] +data <- data[grep("^$", data[, colspe], invert = TRUE), ] +} + +#####Your analysis + +####The abundance in the environment#### + +##Representation of the environment## + +## Mapping +graph_map <- function(data, collong, collat, colabond, ind, colspe) { + cat("\nCoordinates range\n\nLatitude from ", min(data[, collat], na.rm = TRUE), " to ", max(data[, collat], na.rm = TRUE), "\nLongitude from ", min(data[, collong], na.rm = TRUE), " to ", max(data[, collong], na.rm = TRUE), file = "Data_abund.txt", fill = 1, append = TRUE) + if (mult0) { + mappy <- ggplot2::ggplot(data, ggplot2::aes_string(x = collong, y = collat, cex = colabond, color = colspe)) + + ggplot2::geom_point() + ggplot2::ggtitle(paste("Abundance of", ind, "in the environment")) + ggplot2::xlab("Longitude") + ggplot2::ylab("Latitude") + ggplot2::theme(axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1), legend.text = ggplot2::element_text(size = 8)) + ggplot2::guides(cex = ggplot2::guide_legend(reverse = TRUE)) + + }else{ + mappy <- ggplot2::ggplot(data, ggplot2::aes_string(x = collong, y = collat, cex = colabond, color = colabond)) + + ggplot2::geom_point() + ggplot2::ggtitle(paste("Abundance of", ind, "in the environment")) + ggplot2::xlab("Longitude") + ggplot2::ylab("Latitude") + ggplot2::theme(axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1), legend.text = ggplot2::element_text(size = 8)) + ggplot2::guides(cex = ggplot2::guide_legend(reverse = TRUE)) + } + ggplot2::ggsave("mappy.png", mappy, width = 20, height = 9, units = "cm") +} + +####Presence absence abundance#### + +## Histogram +graph_hist <- function(data, col1, col2, col3) { + cat("\nLocations\n", unique(data[, col1]), file = "Locations.txt", fill = 1, append = TRUE) + if (mult1) { + for (loc in unique(data[, col1])) { + data_cut <- data[data[, col1] == loc, ] + data_cut <- data_cut[data_cut[, col3] > 0, ] + if (length(unique(data_cut[, col2])) <= 40) { + top <- nrow(data_cut) + var <- nchar(as.character(round(top * 0.1, digits = 0))) + step <- round(top * 0.1, digits = ifelse(var == 1, 1, -var + 1)) + graph <- ggplot2::ggplot(data_cut) + + ggplot2::geom_bar(ggplot2::aes_string(x = col1, fill = col2)) + + ggplot2::scale_y_continuous(breaks = seq(from = 0, to = top, by = step)) + + ggplot2::theme(plot.title = ggplot2::element_text(color = "black", size = 12, face = "bold")) + + ggplot2::ggtitle("Number of presence") + + ggplot2::ggsave(paste("number_in_", loc, ".png"), graph) + }else{ + cat(paste0("\n", loc, " had more than 40 species and plot isn't readable please select a higher taxon level or cut your data")) + } + } + }else{ + top <- nrow(data) + var <- nchar(as.character(round(top * 0.1, digits = 0))) + step <- round(top * 0.1, digits = ifelse(var == 1, 1, -var + 1)) + graph <- ggplot2::ggplot(data) + + ggplot2::geom_bar(ggplot2::aes_string(x = col1, fill = col2)) + + ggplot2::scale_y_continuous(breaks = seq(from = 0, to = top, by = step)) + + ggplot2::theme(plot.title = ggplot2::element_text(color = "black", size = 12, face = "bold")) + + ggplot2::ggtitle("Number of individuals") + + ggplot2::ggsave("number.png", graph) + } +} + +rare <- function(data, spe, abond, rare, num) { +# Put the data in form + new_data <- as.data.frame(data[, spe]) + colnames(new_data) <- c("Species") + new_data$total <- data[, abond] + + new_data$rarefaction <- as.integer(rare) + + end <- length(unique(new_data$Species)) + out <- vegan::rarecurve(new_data[, 2:3], step = 10, sample = rarefy_sample, label = FALSE) + names(out) <- paste(unique(new_data$Species), sep = "") + +# Coerce data into "long" form. + protox <- mapply(FUN = function(x, y) { + mydf <- as.data.frame(x) + colnames(mydf) <- "value" + mydf$species <- y + mydf$subsample <- attr(x, "Subsample") + mydf <- na.omit(mydf) + mydf + }, x = out, y = as.list(names(out)), SIMPLIFY = FALSE) + + xy <- do.call(rbind, protox) + rownames(xy) <- NULL # pretty + +# Plot. + + if (mult2) { + for (spe in unique(data[, spe])) { + xy_cut <- xy[xy$species == spe, ] + top <- max(xy_cut$subsample) + var <- nchar(as.character(round(top * 0.1, digits = 0))) + step <- round(top * 0.1, digits = ifelse(var == 1, 1, -var + 1)) + courbe <- ggplot2::ggplot(xy_cut, ggplot2::aes(x = subsample, y = value)) + + ggplot2::theme_gray() + + ggplot2::geom_line(size = 1) + + ggplot2::scale_x_continuous(breaks = seq(from = 0, to = top, by = step)) + + ggplot2::xlab("Abundance") + ggplot2::ylab("Value") + + ggplot2::ggtitle("rarefaction curve") + + ggplot2::ggsave(paste("rarefaction_of_", spe, ".png"), courbe) + } + }else{ + top <- max(xy$subsample) + var <- nchar(as.character(round(top * 0.1, digits = 0))) + step <- round(top * 0.1, digits = ifelse(var == 1, 1, -var + 1)) + courbe <- ggplot2::ggplot(xy, ggplot2::aes(x = subsample, y = value, color = species)) + + ggplot2::theme_gray() + + ggplot2::geom_line(size = 1) + + ggplot2::scale_x_continuous(breaks = seq(from = 0, to = top, by = step)) + + ggplot2::xlab("Subsample") + ggplot2::ylab("Value") + + ggplot2::ggtitle("rarefaction curves") + + ggplot2::ggsave("rarefaction.png", courbe) + } +} + +if (abundance) { +#Maps +mult0 <- ifelse(length(unique(data[, colspe])) > 10, FALSE, TRUE) +graph_map(data, collong = collong, collat = collat, colabond = colabond, ind = ind, colspe = colspe) +} + +if (presabs) { +#Presence absence count +mult1 <- ifelse(length(unique(data[, colloc])) <= 10, FALSE, TRUE) +graph_hist(data, col1 = colloc, col2 = colspe, col3 = colabond) +} + +if (rarefaction) { +#rarefaction + +#### rarefaction indice #### +rarefy_sample <- as.numeric(num) + +## Calcul de la rarefaction +rarefaction <- vegan::rarefy(data[, abond], rarefy_sample) + +write.table(rarefaction, "rare.tabular") + +mult2 <- ifelse(length(unique(data[, colspe])) <= 30, FALSE, TRUE) +rare(data, spe = colspe, abond = colabond, rare = rarefaction, num = rarefy_sample) +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/graph_stat_presence_abs.r Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,115 @@ +#Rscript + +################################ +## Median and dispersion ## +################################ + +#####Packages : Cowplot +# ggplot2 + +#####Load arguments + +args <- commandArgs(trailingOnly = TRUE) + +if (length(args) == 0) { + stop("This tool needs at least one argument") +}else{ + table <- args[1] + hr <- args[2] + var <- as.numeric(args[3]) + spe <- as.numeric(args[4]) + loc <- as.numeric(args[5]) + time <- as.numeric(args[6]) +} + +if (hr == "false") { + hr <- FALSE +}else{ + hr <- TRUE +} + +#####Import data +data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8") +data <- na.omit(data) +colvar <- colnames(data)[var] +colspe <- colnames(data)[spe] +colloc <- colnames(data)[loc] +coltime <- colnames(data)[time] + +data <- data[grep("^$", data[, spe], invert = TRUE), ] +time <- as.integer(substring(data[, time], first = 1, last = 4)) + +#####Your analysis + +####Median and data dispersion#### + +#Median +graph_median <- function(data, var) { + graph_median <- ggplot2::ggplot(data, ggplot2::aes_string(y = var)) + + ggplot2::geom_boxplot(color = "darkblue") + + ggplot2::theme(legend.position = "none") + ggplot2::ggtitle("Median") + +return(graph_median) + +} + +#Dispersion +dispersion <- function(data, var, var2) { + graph_dispersion <- ggplot2::ggplot(data) + + ggplot2::geom_point(ggplot2::aes_string(x = var2, y = var, color = var2)) + + ggplot2::scale_fill_brewer(palette = "Set3") + + ggplot2::theme(legend.position = "none", axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1), plot.title = ggplot2::element_text(color = "black", size = 12, face = "bold")) + ggplot2::ggtitle("Dispersion") + +return(graph_dispersion) + +} + +#The 2 graph +med_disp <- function(med, disp) { + graph <- cowplot::plot_grid(med, disp, ncol = 1, nrow = 2, vjust = -5, scales = "free") + + ggplot2::ggsave("Med_Disp.png", graph, width = 12, height = 20, units = "cm") +} + + +#### Zero problem in data #### + +#Put data in form +make_table_analyse <- function(data, var, spe, var2, var3) { + tab <- reshape(data + , v.names = var + , idvar = c(var2, var3) + , timevar = spe + , direction = "wide") + tab[is.na(tab)] <- 0 ###### remplace les na par des 0 / replace NAs by 0 + + colnames(tab) <- sub(var, "", colnames(tab))### remplace le premier pattern "abond." par le second "" / replace the column names "abond." by "" + return(tab) +} +data_num <- make_table_analyse(data, colvar, colspe, colloc, coltime) +nb_spe <- length(unique(data[, spe])) +nb_col <- ncol(data_num) - nb_spe + 1 +data_num <- data_num[, nb_col:ncol(data_num)] + +#Presence of zeros in the data +mat_corr <- function(data) { + cor(data) +} +p_mat <- function(data) { + ggcorrplot::cor_pmat(data) +} # compute a matrix of correlation p-values + +graph_corr <- function(data_num) { + graph <- ggcorrplot::ggcorrplot(mat_corr(data_num), method = "circle", p.mat = p_mat(data_num), #barring the no significant coefficient + ggtheme = ggplot2::theme_gray, colors = c("#00AFBB", "#E7B800", "#FC4E07")) + + ggplot2::ggsave("0_pb.png", graph) +} + +##Med and disp +med <- graph_median(data, var = colvar) +disp <- dispersion(data, var = colvar, var2 = colspe) +med_disp(med = med, disp = disp) + +##O problem +graph_corr(data_num)
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macro.xml Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,65 @@ +<macros> + <token name="@VERSION@">0.0.0</token> + <xml name="Explo_requirements"> + <requirements> + <requirement type="package" version="3.3.3">r-ggplot2</requirement> + <yield /> + </requirements> + </xml> + <xml name="explo_input"> + <param name="input" type="data" format="tabular" label="Input table"/> + <param name="colnames" type="boolean" label="First line is a header line" checked="true"/> + </xml> + <xml name="explo_filter_colli"> + <filter> method['type'] == 'collinearity'</filter> + </xml> + <xml name="explo_filter_pca"> + <filter> method['type'] == 'pca'</filter> + </xml> + <xml name="explo_filter_vif"> + <filter> method['type'] == 'vif'</filter> + </xml> + <xml name="explo_filter_interr"> + <filter> method['type'] == 'interr'</filter> + </xml> + <xml name="explo_filter_autocorr"> + <filter> method['type'] == 'autocorr'</filter> + </xml> + <xml name="explo_filter_abund"> + <filter> method['type'] == 'abund'</filter> + </xml> + <xml name="explo_filter_pres_abs"> + <filter> method['type'] == 'pres_abs'</filter> + </xml> + <xml name="explo_filter_rare"> + <filter> method['type'] == 'rare'</filter> + </xml> + <xml name="explo_bibref"> + <citations> + <citation type="bibtex"> + @unpublished{ + title={ A protocol for data exploration to avoid common statistical problems }, + authors={Alain F. Zuur, Elena N. Ieno, Chris S. Elphick}, + url={https://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/j.2041-210X.2009.00001.x} + } + </citation> + </citations> + </xml> + <xml name="book_bibref"> + <citations> + <citation type="bibtex"> + @unpublished{ + title={ Numerical Ecology with R }, + author={Daniel Borcard, François Gillet, Pierre Legendre}, + } + </citation> + </citations> + </xml> + <xml name="topic"> + <edam_topics> + <edam_topic>topic_0610</edam_topic> + <edam_topic>topic_3050</edam_topic> + </edam_topics> + </xml> +</macros> +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/presence_abs_abund.xml Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,206 @@ +<tool id="ecology_presence_abs_abund" name="Presence-absence and abundance" version="@VERSION@" profile="20.01"> + <description>Community abundance map, presence barplot and rarefaction curves</description> + <macros> + <import>macro.xml</import> + </macros> + <expand macro="Explo_requirements"> + <requirement type="package" version="2.5_7">r-vegan</requirement> + </expand> + <command detect_errors="exit_code"><![CDATA[ + Rscript + '$__tool_directory__/graph_pres_abs_abund.r' + '$input' + '$colnames' + #if $method.type=='abund': + 'TRUE' + 'FALSE' + 'FALSE' + '$method.latitude' + '$method.longitude' + '$method.individual' + '' + '' + '$method.species' + #elif $method.type=='pres_abs': + 'FALSE' + 'TRUE' + 'FALSE' + '' + '' + '' + '$method.site' + '' + '$method.species' + #else: + 'FALSE' + 'FALSE' + 'TRUE' + '' + '' + '' + '' + '$method.number' + '$method.species' + #end if + '$abundance' + ]]> + </command> + <inputs> + <expand macro="explo_input"/> + <conditional name="method"> + <param name="type" type="select" label="Variables presence, absence and abundance" display="radio"> + <option value="abund">Abundance map in the environment </option> + <option value="pres_abs">Presence count of taxons (barplot)</option> + <option value="rare">Rarefaction curve of species</option> + </param> + <when value="abund"> + <param name="latitude" label="Select column containing latitudes " type="data_column" data_ref="input" numerical="true" use_header_names="true"/> + <param name="longitude" label="Select column containing longitudes" type="data_column" data_ref="input" numerical="true" use_header_names="true"/> + <param name="individual" type="text" label="What do you study in this analysis ?" help="Simply allows you to use any name you want in your plot's title (ex : ''Bats'', ''Chiroptera'')"/> + <param name="species" label="Select column containing taxon " type="data_column" data_ref="input" numerical="false" use_header_names="true"/> + </when> + <when value="pres_abs"> + <param name="site" label="Select column containing your separation variable" type="data_column" help="ex : location, protection status, ..." data_ref="input" use_header_names="true"/> + <param name="species" label="Select column containing taxon " type="data_column" data_ref="input" numerical="false" use_header_names="true"/> + </when> + <when value="rare"> + <param name="number" label="Size of subsamples" type="text" help="Rarefaction curves are calculated over random subsamples, you can choose the size you want depending on your data and the analysis you need. Should be smaller than the size of your community"/> + <param name="species" label="Select column containing species " type="data_column" data_ref="input" numerical="false" use_header_names="true"/> + </when> + </conditional> + <param name="abundance" label="Select column containing abundances " type="data_column" data_ref="input" numerical="true" use_header_names="true"/> + </inputs> + <outputs> + <data name="output_abund" from_work_dir="Data_abund.txt" format="txt" label="Data used"> + <expand macro="explo_filter_abund"/> + </data> + <data name="output_pres_abs" from_work_dir="Locations.txt" format="txt" label="Locations used"> + <expand macro="explo_filter_pres_abs"/> + </data> + <data name="output_rare" from_work_dir="Rare.tabular" format="tabular" label="Rare indice"> + <expand macro="explo_filter_rare"/> + </data> + <collection type="list" name="plots"> + <discover_datasets pattern="(?P<designation>.+)\.png" visible="false" format="png"/> + </collection> + </outputs> + <tests> + <test> + <param name="input" value="Reel_life_survey_fish_modif2.tabular"/> + <param name="colnames" value="true"/> + <conditional name="method"> + <param name="abund" value="true"/> + <param name="latitute" value="9"/> + <param name="longitude" value="10"/> + <param name="individual" value="fishes"/> + <param name="species" value="15"/> + </conditional> + <param name="abundance" value="18"/> + <output name="output_abund"> + <assert_contents> + <has_n_lines n="12"/> + </assert_contents> + </output> + <output_collection name="plots" type="list" count="1"> + <element name="mappy" ftype="png"> + <assert_contents> + <has_text text="PNG"/> + </assert_contents> + </element> + </output_collection> + </test> + </tests> + <expand macro="topic"/> + <help><![CDATA[ +============================================================================= +Map of community abundance, presence barplot of taxons and rarefaction curves +============================================================================= + +**Map of community abundance** + + +This tool computes abundances of each taxon for each location and plots it according to longitude and latitude. Size of dots permits to get information on the abundance found at the location. Under 10 taxons, colors represents the different taxons and over 10 taxons it represents the abundance as well. +Handy to get spatialized view of your abundances and see if some locations can pull results in a certain direction. + + +Input description : + + +A tabular file with observation data. Must at least contain four columns abundance, latitude, longitude and taxon (any taxon level : species, family, ...). + + ++----------+-----------+---------+------------+ +| latitude | longitude | taxon | number | ++==========+===========+=========+============+ +| lat |long | taxonID | 4 | ++----------+-----------+---------+------------+ +| ... | ... | ... | ... | ++----------+-----------+---------+------------+ + + +Output description : + + +A png file with every abundance dots for each location, a map without base. +A text file containing the geographical range of the data. + + +**Presence count of taxons (barplot)** + + +This tool computes the number of presence of each taxon according to a separation factor (ex: location, protection status, ...) and produces a barplot representing the relative presence count of each taxon. Handy to see the most ubiquitous taxons in the studied community. +If more than 40 different taxons in the separations, plots are hard to read properly so they won't be produced. In that case you can cut your data into smaller parts to get several readable representations for one separation. + + +Input description : + + +A tabular file with observation data. Must at least contain three columns species, abundance and the separation variable. + + ++--------------+------------+------------+ +| species.code | variable | number | ++==============+============+============+ +| speciesID | site | 4 | ++--------------+------------+------------+ +| ... | ... | ... | ++--------------+------------+------------+ + + +Output description : + + +A png file with barplots separated according to the variable and with multiple parts in different colors according to the different taxons. + + +**Rarefaction curve of species** + + +This tool computes the rarefaction curves of each species. Permits you to assess species richness according to the number of samples. If there are more than 30 species in your data you will have one plot for each species and not all the curves on one plot. +Using the R function rarefy (https://www.rdocumentation.org/packages/vegan/versions/2.4-2/topics/rarefy). + + +Input description : + + +A tabular file with observation data. Must at least contain two columns abundance and species. +A numeric value for the rarefaction indice (number of subsamples) must be entered. + + ++-----------+------------+ +| species | number | ++===========+============+ +| speciesID | 4 | ++-----------+------------+ +| ... | ... | ++-----------+------------+ + + +Output description : + + +A png file with one or multiple plots showing the rarefaction curves for each species according to the chosen rarefaction indice. + ]]> </help> + <expand macro="book_bibref"/> + +</tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/Data.tabular Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,2 @@ +"x" +"1" 29
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/Missing_species.txt Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,6 @@ + +There is not enough data on these species they appear too few times in the tabular-file + +Scorpaenidae +Plesiopidae +Serranidae
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/Reel_life_survey_fish_modif.tabular Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,290 @@ +FID Key SurveyID Country Ecoregion Realm SiteCode Site SiteLat SiteLong SurveyDate Depth Phylum Class Family Taxon Block Total Diver geom +M2_FISH_DATA.1 1 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 2 LVS POINT (151.92 -23.18) +M2_FISH_DATA.2 2 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 5 LVS POINT (151.92 -23.18) +M2_FISH_DATA.3 3 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Blenniidae Ecsenius stictus 2 8 LVS POINT (151.92 -23.18) +M2_FISH_DATA.4 4 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota guttata 1 6 LVS POINT (151.92 -23.18) +M2_FISH_DATA.5 5 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota guttata 2 9 LVS POINT (151.92 -23.18) +M2_FISH_DATA.6 6 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota hoesei 1 3 LVS POINT (151.92 -23.18) +M2_FISH_DATA.7 7 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota hoesei 2 19 LVS POINT (151.92 -23.18) +M2_FISH_DATA.8 8 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon histrio 1 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.9 9 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon histrio 2 3 LVS POINT (151.92 -23.18) +M2_FISH_DATA.10 10 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon sp. [3 GA] 1 12 LVS POINT (151.92 -23.18) +M2_FISH_DATA.11 11 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon spp. 2 5 LVS POINT (151.92 -23.18) +M2_FISH_DATA.12 12 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Scorpaenidae Parascorpaena aurita 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.13 13 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Tripterygiidae Ucla xenogrammus 1 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.14 14 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Tripterygiidae Ucla xenogrammus 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.15 15 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Plesiopidae Assessor macneilli 2 20 LVS POINT (151.92 -23.18) +M2_FISH_DATA.16 16 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 4 LVS POINT (151.92 -23.18) +M2_FISH_DATA.17 17 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.18 18 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 5 LVS POINT (151.92 -23.18) +M2_FISH_DATA.19 19 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 6 LVS POINT (151.92 -23.18) +M2_FISH_DATA.20 20 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.21 21 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius stictus 2 3 LVS POINT (151.92 -23.18) +M2_FISH_DATA.22 22 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 3 LVS POINT (151.92 -23.18) +M2_FISH_DATA.23 23 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Serranidae Epinephelus fasciatus 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.24 24 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota guttata 1 6 LVS POINT (151.92 -23.18) +M2_FISH_DATA.25 25 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota guttata 2 8 LVS POINT (151.92 -23.18) +M2_FISH_DATA.26 26 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota hoesei 1 7 LVS POINT (151.92 -23.18) +M2_FISH_DATA.27 27 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota hoesei 2 12 LVS POINT (151.92 -23.18) +M2_FISH_DATA.28 28 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Gobiodon sp. [3 GA] 2 16 LVS POINT (151.92 -23.18) +M2_FISH_DATA.29 29 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Gobiodon spp. 2 7 LVS POINT (151.92 -23.18) +M2_FISH_DATA.30 30 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Paragobiodon echinocephalus 2 2 LVS POINT (151.92 -23.18) +M2_FISH_DATA.31 31 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Pinguipedidae Parapercis clathrata 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.32 32 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Apogonidae Apogon spp. 1 1 ATC POINT (151.75 -23.53) +M2_FISH_DATA.33 33 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Serranidae Diploprion bifasciatum 1 1 ATC POINT (151.75 -23.53) +M2_FISH_DATA.34 34 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 5 ATC POINT (151.75 -23.53) +M2_FISH_DATA.35 35 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Gobiidae Gobiodon histrio 1 1 ATC POINT (151.75 -23.53) +M2_FISH_DATA.36 36 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 2 ATC POINT (151.75 -23.53) +M2_FISH_DATA.37 37 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Pinguipedidae Parapercis australis 1 2 ATC POINT (151.75 -23.53) +M2_FISH_DATA.38 38 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Blenniidae Salarias spp. 1 1 ATC POINT (151.75 -23.53) +M2_FISH_DATA.39 39 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 3 PBD POINT (151.75 -23.53) +M2_FISH_DATA.40 40 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Gobiidae Istigobius decoratus 2 3 PBD POINT (151.75 -23.53) +M2_FISH_DATA.41 41 912345712 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8 Chordata Actinopterygii Gobiidae Valenciennea decora 2 2 PBD POINT (151.75 -23.53) +M2_FISH_DATA.42 42 912345713 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8.1 Chordata Actinopterygii Apogonidae Apogon spp. 1 1 ATC POINT (151.75 -23.53) +M2_FISH_DATA.43 43 912345713 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 3 ATC POINT (151.75 -23.53) +M2_FISH_DATA.44 44 912345713 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8.1 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 6 ATC POINT (151.75 -23.53) +M2_FISH_DATA.45 45 912345713 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8.1 Chordata Actinopterygii Muraenidae Gymnothorax spp. 1 1 ATC POINT (151.75 -23.53) +M2_FISH_DATA.46 46 912345713 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 7 ATC POINT (151.75 -23.53) +M2_FISH_DATA.47 47 912345713 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2015-10-01T14:00:00Z 8.1 Chordata Actinopterygii Plesiopidae Assessor macneilli 2 2 PBD POINT (151.75 -23.53) +M2_FISH_DATA.48 48 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Gobiidae Amblygobius phalaena 2 2 CK POINT (151.75 -23.53) +M2_FISH_DATA.49 49 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Blenniidae Atrosalarias holomelas 1 2 CK POINT (151.75 -23.53) +M2_FISH_DATA.50 50 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Apogonidae Cheilodipterus quinquelineatus 1 2 CK POINT (151.75 -23.53) +M2_FISH_DATA.51 51 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 3 CK POINT (151.75 -23.53) +M2_FISH_DATA.52 52 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.53 53 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Serranidae Epinephelus merra 1 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.54 54 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 3 CK POINT (151.75 -23.53) +M2_FISH_DATA.55 55 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Gobiidae Istigobius decoratus 2 8 CK POINT (151.75 -23.53) +M2_FISH_DATA.56 56 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Opistognathidae Opistognathus spp. 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.57 57 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Pinguipedidae Parapercis australis 1 4 CK POINT (151.75 -23.53) +M2_FISH_DATA.58 58 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Pinguipedidae Parapercis australis 2 3 CK POINT (151.75 -23.53) +M2_FISH_DATA.59 59 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Holocentridae Sargocentron rubrum 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.60 60 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Gobiidae Valenciennea longipinnis 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.61 61 912347130 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8 Chordata Actinopterygii Gobiidae Valenciennea muralis 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.62 62 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Amblyeleotris wheeleri 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.63 63 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Amblygobius phalaena 1 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.64 64 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Amblygobius phalaena 2 2 CK POINT (151.75 -23.53) +M2_FISH_DATA.65 65 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Apogonidae Cheilodipterus quinquelineatus 1 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.66 66 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 3 CK POINT (151.75 -23.53) +M2_FISH_DATA.67 67 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 9 CK POINT (151.75 -23.53) +M2_FISH_DATA.68 68 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 2 CK POINT (151.75 -23.53) +M2_FISH_DATA.69 69 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Eviota guttata 1 2 CK POINT (151.75 -23.53) +M2_FISH_DATA.70 70 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Eviota guttata 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.71 71 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Eviota prasites 2 2 CK POINT (151.75 -23.53) +M2_FISH_DATA.72 72 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 6 CK POINT (151.75 -23.53) +M2_FISH_DATA.73 73 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 2 7 CK POINT (151.75 -23.53) +M2_FISH_DATA.74 74 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Opistognathidae Opistognathus spp. 1 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.75 75 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Opistognathidae Opistognathus spp. 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.76 76 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Pinguipedidae Parapercis australis 1 2 CK POINT (151.75 -23.53) +M2_FISH_DATA.77 77 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Pinguipedidae Parapercis australis 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.78 78 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Pinguipedidae Parapercis queenslandica 1 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.79 79 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Pinguipedidae Parapercis queenslandica 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.80 80 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Holocentridae Sargocentron rubrum 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.81 81 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Valenciennea longipinnis 2 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.82 82 912347131 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS2 Masthead Site 1 -23.53 151.75 2017-03-10T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Valenciennea muralis 1 1 CK POINT (151.75 -23.53) +M2_FISH_DATA.83 83 912345714 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS3 Masthead Site 2 -23.53 151.75 2015-10-02T14:00:00Z 7 Chordata Actinopterygii Tripterygiidae Enneapterygius mirabilis 1 3 ATC POINT (151.75 -23.53) +M2_FISH_DATA.84 84 912345714 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS3 Masthead Site 2 -23.53 151.75 2015-10-02T14:00:00Z 7 Chordata Actinopterygii Gobiidae Eviota spp. 1 4 ATC POINT (151.75 -23.53) +M2_FISH_DATA.85 85 912345714 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS3 Masthead Site 2 -23.53 151.75 2015-10-02T14:00:00Z 7 Chordata Actinopterygii Pinguipedidae Parapercis australis 1 2 ATC POINT (151.75 -23.53) +M2_FISH_DATA.86 86 912345714 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS3 Masthead Site 2 -23.53 151.75 2015-10-02T14:00:00Z 7 Chordata Actinopterygii Gobiidae Eviota spp. 2 5 PBD POINT (151.75 -23.53) +M2_FISH_DATA.87 87 912345715 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS3 Masthead Site 2 -23.53 151.75 2015-10-02T14:00:00Z 7.1 Chordata Actinopterygii Tripterygiidae Enneapterygius mirabilis 1 13 ATC POINT (151.75 -23.53) +M2_FISH_DATA.88 88 912345715 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS3 Masthead Site 2 -23.53 151.75 2015-10-02T14:00:00Z 7.1 Chordata Actinopterygii Gobiidae Eviota spp. 1 2 ATC POINT (151.75 -23.53) +M2_FISH_DATA.89 89 912345715 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS3 Masthead Site 2 -23.53 151.75 2015-10-02T14:00:00Z 7.1 Chordata Actinopterygii Pinguipedidae Parapercis australis 1 1 ATC POINT (151.75 -23.53) +M2_FISH_DATA.90 90 912345716 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 2 ATC POINT (151.77 -23.5) +M2_FISH_DATA.91 91 912345716 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5 Chordata Actinopterygii Pseudochromidae Labracinus cyclophthalmus 1 2 ATC POINT (151.77 -23.5) +M2_FISH_DATA.92 92 912345716 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5 Chordata Actinopterygii Pinguipedidae Parapercis australis 1 2 ATC POINT (151.77 -23.5) +M2_FISH_DATA.93 93 912345716 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5 Chordata Actinopterygii Blenniidae Blenniid spp. 2 1 PBD POINT (151.77 -23.5) +M2_FISH_DATA.94 94 912345716 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5 Chordata Actinopterygii Pinguipedidae Parapercis australis 2 1 PBD POINT (151.77 -23.5) +M2_FISH_DATA.95 95 912345717 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5.1 Chordata Actinopterygii Serranidae Diploprion bifasciatum 1 1 ATC POINT (151.77 -23.5) +M2_FISH_DATA.96 96 912345717 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 1 ATC POINT (151.77 -23.5) +M2_FISH_DATA.97 97 912345717 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 3 ATC POINT (151.77 -23.5) +M2_FISH_DATA.98 98 912345717 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5.1 Chordata Actinopterygii Pseudochromidae Labracinus cyclophthalmus 1 1 ATC POINT (151.77 -23.5) +M2_FISH_DATA.99 99 912345717 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5.1 Chordata Actinopterygii Pinguipedidae Parapercis australis 1 1 ATC POINT (151.77 -23.5) +M2_FISH_DATA.100 100 912345717 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5.1 Chordata Actinopterygii Pinguipedidae Parapercis hexophtalma 1 1 ATC POINT (151.77 -23.5) +M2_FISH_DATA.101 101 912345717 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 2 5 PBD POINT (151.77 -23.5) +M2_FISH_DATA.102 102 912345717 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2015-10-03T14:00:00Z 5.1 Chordata Actinopterygii Pinguipedidae Parapercis stricticeps 2 1 PBD POINT (151.77 -23.5) +M2_FISH_DATA.103 103 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Amblygobius phalaena 1 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.104 104 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Blenniidae Atrosalarias holomelas 2 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.105 105 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Apogonidae Cheilodipterus quinquelineatus 1 4 CK POINT (151.77 -23.5) +M2_FISH_DATA.106 106 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 5 CK POINT (151.77 -23.5) +M2_FISH_DATA.107 107 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 9 CK POINT (151.77 -23.5) +M2_FISH_DATA.108 108 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 2 22 CK POINT (151.77 -23.5) +M2_FISH_DATA.109 109 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Eviota guttata 1 2 CK POINT (151.77 -23.5) +M2_FISH_DATA.110 110 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Eviota guttata 2 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.111 111 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Eviota prasites 2 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.112 112 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 23 CK POINT (151.77 -23.5) +M2_FISH_DATA.113 113 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Istigobius decoratus 2 29 CK POINT (151.77 -23.5) +M2_FISH_DATA.114 114 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Pinguipedidae Parapercis australis 1 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.115 115 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Pinguipedidae Parapercis xanthozona 1 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.116 116 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Valenciennea longipinnis 1 8 CK POINT (151.77 -23.5) +M2_FISH_DATA.117 117 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Valenciennea longipinnis 2 13 CK POINT (151.77 -23.5) +M2_FISH_DATA.118 118 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Valenciennea muralis 1 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.119 119 912347120 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5 Chordata Actinopterygii Gobiidae Valenciennea muralis 2 2 CK POINT (151.77 -23.5) +M2_FISH_DATA.120 120 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 2 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.121 121 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 17 CK POINT (151.77 -23.5) +M2_FISH_DATA.122 122 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 21 CK POINT (151.77 -23.5) +M2_FISH_DATA.123 123 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 1 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.124 124 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 2 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.125 125 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Blenniidae Ecsenius stictus 2 2 CK POINT (151.77 -23.5) +M2_FISH_DATA.126 126 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 15 CK POINT (151.77 -23.5) +M2_FISH_DATA.127 127 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Eviota guttata 1 3 CK POINT (151.77 -23.5) +M2_FISH_DATA.128 128 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Eviota guttata 2 6 CK POINT (151.77 -23.5) +M2_FISH_DATA.129 129 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Eviota prasites 2 2 CK POINT (151.77 -23.5) +M2_FISH_DATA.130 130 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Eviota sebreei 2 1 CK POINT (151.77 -23.5) +M2_FISH_DATA.131 131 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 30 CK POINT (151.77 -23.5) +M2_FISH_DATA.132 132 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 2 13 CK POINT (151.77 -23.5) +M2_FISH_DATA.133 133 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Blenniidae Plagiotremus laudandus 1 2 CK POINT (151.77 -23.5) +M2_FISH_DATA.134 134 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Blenniidae Plagiotremus laudandus 2 2 CK POINT (151.77 -23.5) +M2_FISH_DATA.135 135 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Valenciennea longipinnis 1 12 CK POINT (151.77 -23.5) +M2_FISH_DATA.136 136 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Valenciennea longipinnis 2 3 CK POINT (151.77 -23.5) +M2_FISH_DATA.137 137 912347121 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS4 Erskyne Island Site 1 -23.5 151.77 2017-03-09T13:00:00Z 5.1 Chordata Actinopterygii Gobiidae Valenciennea muralis 2 6 CK POINT (151.77 -23.5) +M2_FISH_DATA.138 138 912345718 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2015-10-03T14:00:00Z 6 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 6 ATC POINT (151.78 -23.5) +M2_FISH_DATA.139 139 912345718 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2015-10-03T14:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon histrio 1 2 ATC POINT (151.78 -23.5) +M2_FISH_DATA.140 140 912345719 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2015-10-03T14:00:00Z 6.1 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 3 ATC POINT (151.78 -23.5) +M2_FISH_DATA.141 141 912345719 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2015-10-03T14:00:00Z 6.1 Chordata Actinopterygii Gobiidae Gobiodon histrio 1 3 ATC POINT (151.78 -23.5) +M2_FISH_DATA.142 142 912345719 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2015-10-03T14:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota spp. 2 8 PBD POINT (151.78 -23.5) +M2_FISH_DATA.143 143 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Apogonidae Apogon capricornis 1 95 GJE POINT (151.78 -23.5) +M2_FISH_DATA.144 144 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Apogonidae Apogon capricornis 2 155 GJE POINT (151.78 -23.5) +M2_FISH_DATA.145 145 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 7 GJE POINT (151.78 -23.5) +M2_FISH_DATA.146 146 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 9 GJE POINT (151.78 -23.5) +M2_FISH_DATA.147 147 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 2 GJE POINT (151.78 -23.5) +M2_FISH_DATA.148 148 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota guttata 1 12 GJE POINT (151.78 -23.5) +M2_FISH_DATA.149 149 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota guttata 2 5 GJE POINT (151.78 -23.5) +M2_FISH_DATA.150 150 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Fusigobius neophytus 1 4 GJE POINT (151.78 -23.5) +M2_FISH_DATA.151 151 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 2 4 GJE POINT (151.78 -23.5) +M2_FISH_DATA.152 152 912347122 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6.1 Chordata Actinopterygii Pempherididae Parapriacanthus ransonneti 1 225 GJE POINT (151.78 -23.5) +M2_FISH_DATA.153 153 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Gobiidae Amblygobius phalaena 1 3 CK POINT (151.78 -23.5) +M2_FISH_DATA.154 154 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Apogonidae Apogon capricornis 1 25 CK POINT (151.78 -23.5) +M2_FISH_DATA.155 155 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Apogonidae Apogon capricornis 2 60 CK POINT (151.78 -23.5) +M2_FISH_DATA.156 156 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Blenniidae Atrosalarias holomelas 1 5 CK POINT (151.78 -23.5) +M2_FISH_DATA.157 157 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Blenniidae Atrosalarias holomelas 2 3 CK POINT (151.78 -23.5) +M2_FISH_DATA.158 158 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Blenniidae Crossosalarias macrospilus 1 1 CK POINT (151.78 -23.5) +M2_FISH_DATA.159 159 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 1 CK POINT (151.78 -23.5) +M2_FISH_DATA.160 160 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 3 CK POINT (151.78 -23.5) +M2_FISH_DATA.161 161 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 2 1 CK POINT (151.78 -23.5) +M2_FISH_DATA.162 162 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota guttata 1 1 CK POINT (151.78 -23.5) +M2_FISH_DATA.163 163 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota guttata 2 1 CK POINT (151.78 -23.5) +M2_FISH_DATA.164 164 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota prasites 1 1 CK POINT (151.78 -23.5) +M2_FISH_DATA.165 165 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Muraenidae Gymnothorax javanicus 1 1 CK POINT (151.78 -23.5) +M2_FISH_DATA.166 166 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 4 CK POINT (151.78 -23.5) +M2_FISH_DATA.167 167 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Pempherididae Parapriacanthus ransonneti 1 85 CK POINT (151.78 -23.5) +M2_FISH_DATA.168 168 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Pempherididae Parapriacanthus ransonneti 2 200 CK POINT (151.78 -23.5) +M2_FISH_DATA.169 169 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Pseudochromidae Pseudochromis fuscus 1 1 CK POINT (151.78 -23.5) +M2_FISH_DATA.170 170 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Synodontidae Synodus variegatus 1 2 CK POINT (151.78 -23.5) +M2_FISH_DATA.171 171 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Synodontidae Synodus variegatus 2 2 CK POINT (151.78 -23.5) +M2_FISH_DATA.172 172 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Apogonidae Taeniamia leai 1 5 CK POINT (151.78 -23.5) +M2_FISH_DATA.173 173 912347135 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS5 Erskyne Island Site 2 -23.5 151.78 2017-03-09T13:00:00Z 6 Chordata Actinopterygii Apogonidae Taeniamia leai 2 10 CK POINT (151.78 -23.5) +M2_FISH_DATA.174 174 912345720 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 1 ATC POINT (151.78 -23.5) +M2_FISH_DATA.175 175 912345720 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 5 ATC POINT (151.78 -23.5) +M2_FISH_DATA.176 176 912345720 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 4 ATC POINT (151.78 -23.5) +M2_FISH_DATA.177 177 912345720 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7 Chordata Actinopterygii Pinguipedidae Parapercis queenslandica 1 1 ATC POINT (151.78 -23.5) +M2_FISH_DATA.178 178 912345720 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7 Chordata Actinopterygii Holocentridae Sargocentron rubrum 1 2 ATC POINT (151.78 -23.5) +M2_FISH_DATA.179 179 912345720 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7 Chordata Actinopterygii Pinguipedidae Parapercis spp. 2 1 PBD POINT (151.78 -23.5) +M2_FISH_DATA.180 180 912345721 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7.1 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 3 ATC POINT (151.78 -23.5) +M2_FISH_DATA.181 181 912345721 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7.1 Chordata Actinopterygii Gobiidae Istigobius decoratus 1 5 ATC POINT (151.78 -23.5) +M2_FISH_DATA.182 182 912345721 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7.1 Chordata Actinopterygii Holocentridae Sargocentron rubrum 1 1 ATC POINT (151.78 -23.5) +M2_FISH_DATA.183 183 912345721 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7.1 Chordata Actinopterygii Synodontidae Synodus variegatus 1 1 ATC POINT (151.78 -23.5) +M2_FISH_DATA.184 184 912345721 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7.1 Chordata Actinopterygii Gobiidae Amblygobius phalaena 2 1 PBD POINT (151.78 -23.5) +M2_FISH_DATA.185 185 912345721 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7.1 Chordata Actinopterygii Pinguipedidae Parapercis spp. 2 1 PBD POINT (151.78 -23.5) +M2_FISH_DATA.186 186 912345721 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS6 Erskyne Island Site 3 -23.5 151.78 2015-10-04T13:00:00Z 7.1 Chordata Actinopterygii Synodontidae Synodus variegatus 2 1 PBD POINT (151.78 -23.5) +M2_FISH_DATA.187 187 912345722 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2015-10-04T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 4 ATC POINT (151.95 -23.25) +M2_FISH_DATA.188 188 912345722 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2015-10-04T13:00:00Z 8 Chordata Actinopterygii Blenniidae Blenniid spp. 2 2 PBD POINT (151.95 -23.25) +M2_FISH_DATA.189 189 912345722 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2015-10-04T13:00:00Z 8 Chordata Actinopterygii Gobiidae Gobiid spp. 2 1 PBD POINT (151.95 -23.25) +M2_FISH_DATA.190 190 912345723 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2015-10-04T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Cirripectes spp. 1 1 ATC POINT (151.95 -23.25) +M2_FISH_DATA.191 191 912345723 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2015-10-04T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 2 ATC POINT (151.95 -23.25) +M2_FISH_DATA.192 192 912345723 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2015-10-04T13:00:00Z 8.5 Chordata Actinopterygii Apogonidae Apogonid spp. 2 2 PBD POINT (151.95 -23.25) +M2_FISH_DATA.193 193 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Cirripectes filamentosus 1 1 CK POINT (151.95 -23.25) +M2_FISH_DATA.194 194 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 2 CK POINT (151.95 -23.25) +M2_FISH_DATA.195 195 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius bicolor 2 4 CK POINT (151.95 -23.25) +M2_FISH_DATA.196 196 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 4 CK POINT (151.95 -23.25) +M2_FISH_DATA.197 197 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 3 CK POINT (151.95 -23.25) +M2_FISH_DATA.198 198 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 1 2 CK POINT (151.95 -23.25) +M2_FISH_DATA.199 199 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 2 3 CK POINT (151.95 -23.25) +M2_FISH_DATA.200 200 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 1 CK POINT (151.95 -23.25) +M2_FISH_DATA.201 201 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius stictus 2 1 CK POINT (151.95 -23.25) +M2_FISH_DATA.202 202 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Gobiidae Eviota guttata 1 2 CK POINT (151.95 -23.25) +M2_FISH_DATA.203 203 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Plagiotremus tapeinosoma 2 1 CK POINT (151.95 -23.25) +M2_FISH_DATA.204 204 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Gobiidae Pleurosicya spp. 1 5 CK POINT (151.95 -23.25) +M2_FISH_DATA.205 205 912347125 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Synodontidae Synodus variegatus 2 1 CK POINT (151.95 -23.25) +M2_FISH_DATA.206 206 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 2 CK POINT (151.95 -23.25) +M2_FISH_DATA.207 207 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius bicolor 2 6 CK POINT (151.95 -23.25) +M2_FISH_DATA.208 208 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 3 CK POINT (151.95 -23.25) +M2_FISH_DATA.209 209 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 2 CK POINT (151.95 -23.25) +M2_FISH_DATA.210 210 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 1 2 CK POINT (151.95 -23.25) +M2_FISH_DATA.211 211 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 2 3 CK POINT (151.95 -23.25) +M2_FISH_DATA.212 212 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 2 CK POINT (151.95 -23.25) +M2_FISH_DATA.213 213 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Blenniidae Ecsenius stictus 2 1 CK POINT (151.95 -23.25) +M2_FISH_DATA.214 214 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Gobiidae Eviota guttata 1 3 CK POINT (151.95 -23.25) +M2_FISH_DATA.215 215 912347126 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS7 Broomfield Reef Site 2 -23.25 151.95 2017-03-08T13:00:00Z 8.5 Chordata Actinopterygii Gobiidae Eviota guttata 2 4 CK POINT (151.95 -23.25) +M2_FISH_DATA.216 216 912345724 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 10 ATC POINT (151.94 -23.25) +M2_FISH_DATA.217 217 912345724 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 6 ATC POINT (151.94 -23.25) +M2_FISH_DATA.218 218 912345724 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 2 ATC POINT (151.94 -23.25) +M2_FISH_DATA.219 219 912345724 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8 Chordata Actinopterygii Serranidae Epinephelus fasciatus 1 2 ATC POINT (151.94 -23.25) +M2_FISH_DATA.220 220 912345724 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8 Chordata Actinopterygii Holocentridae Sargocentron rubrum 1 1 ATC POINT (151.94 -23.25) +M2_FISH_DATA.221 221 912345724 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8 Chordata Actinopterygii Gobiidae Ctenogobiops pomastictus 2 3 PBD POINT (151.94 -23.25) +M2_FISH_DATA.222 222 912345725 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 12 ATC POINT (151.94 -23.25) +M2_FISH_DATA.223 223 912345725 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 3 ATC POINT (151.94 -23.25) +M2_FISH_DATA.224 224 912345725 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2015-10-05T13:00:00Z 8.1 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 1 ATC POINT (151.94 -23.25) +M2_FISH_DATA.225 225 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Plesiopidae Assessor macneilli 1 10 CK POINT (151.94 -23.25) +M2_FISH_DATA.226 226 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Apogonidae Cheilodipterus quinquelineatus 1 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.227 227 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius bicolor 2 2 CK POINT (151.94 -23.25) +M2_FISH_DATA.228 228 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 3 CK POINT (151.94 -23.25) +M2_FISH_DATA.229 229 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.230 230 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 1 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.231 231 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 2 4 CK POINT (151.94 -23.25) +M2_FISH_DATA.232 232 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 3 CK POINT (151.94 -23.25) +M2_FISH_DATA.233 233 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Blenniidae Ecsenius stictus 2 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.234 234 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Gobiidae Eviota guttata 1 6 CK POINT (151.94 -23.25) +M2_FISH_DATA.235 235 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Gobiidae Eviota guttata 2 6 CK POINT (151.94 -23.25) +M2_FISH_DATA.236 236 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Gobiidae Gobiodon quinquestrigatus 2 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.237 237 912347123 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8 Chordata Actinopterygii Scorpaenidae Scorpaenid spp. 1 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.238 238 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Blenniella chrysospilos 1 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.239 239 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 10 CK POINT (151.94 -23.25) +M2_FISH_DATA.240 240 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 2 6 CK POINT (151.94 -23.25) +M2_FISH_DATA.241 241 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 5 CK POINT (151.94 -23.25) +M2_FISH_DATA.242 242 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 3 CK POINT (151.94 -23.25) +M2_FISH_DATA.243 243 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 1 17 CK POINT (151.94 -23.25) +M2_FISH_DATA.244 244 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius sp. [black and green] 2 16 CK POINT (151.94 -23.25) +M2_FISH_DATA.245 245 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Ecsenius spp. 1 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.246 246 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Eviota guttata 1 2 CK POINT (151.94 -23.25) +M2_FISH_DATA.247 247 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Gobiidae Eviota guttata 2 4 CK POINT (151.94 -23.25) +M2_FISH_DATA.248 248 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Blenniidae Plagiotremus tapeinosoma 1 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.249 249 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Holocentridae Sargocentron rubrum 1 1 CK POINT (151.94 -23.25) +M2_FISH_DATA.250 250 912347124 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS8 Broomfield Reef Site 1 -23.25 151.94 2017-03-08T13:00:00Z 8.1 Chordata Actinopterygii Tripterygiidae Ucla xenogrammus 1 2 CK POINT (151.94 -23.25) +M2_FISH_DATA.251 251 912345726 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS9 Broomfield Reef Site 3 -23.26 151.95 2015-10-05T13:00:00Z 9 Chordata Actinopterygii Blenniidae Cirripectes spp. 1 1 ATC POINT (151.95 -23.26) +M2_FISH_DATA.252 252 912345726 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS9 Broomfield Reef Site 3 -23.26 151.95 2015-10-05T13:00:00Z 9 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 3 ATC POINT (151.95 -23.26) +M2_FISH_DATA.253 253 912349189 Spain Alboran Sea Temperate Northern Atlantic AND64 Isla San Andrés (Parque Natural) 36.99 -1.89 2015-09-13T14:00:00Z 11.5 Chordata Actinopterygii Apogonidae Apogon imberbis 1 1 NDL POINT (-1.8900000000000001 36.99) +M2_FISH_DATA.254 254 912349189 Spain Alboran Sea Temperate Northern Atlantic AND64 Isla San Andrés (Parque Natural) 36.99 -1.89 2015-09-13T14:00:00Z 11.5 Chordata Actinopterygii Blenniidae Parablennius gattorugine 1 1 NDL POINT (-1.8900000000000001 36.99) +M2_FISH_DATA.255 255 912349189 Spain Alboran Sea Temperate Northern Atlantic AND64 Isla San Andrés (Parque Natural) 36.99 -1.89 2015-09-13T14:00:00Z 11.5 Chordata Actinopterygii Tripterygiidae Tripterygion delaisi 1 3 NDL POINT (-1.8900000000000001 36.99) +M2_FISH_DATA.256 256 912349190 Spain Alboran Sea Temperate Northern Atlantic AND65 Isla San Juan 37.35 -1.65 2015-09-13T14:00:00Z 9.6 Chordata Actinopterygii Apogonidae Apogon imberbis 1 1 JASF POINT (-1.65 37.35) +M2_FISH_DATA.257 257 912349190 Spain Alboran Sea Temperate Northern Atlantic AND65 Isla San Juan 37.35 -1.65 2015-09-13T14:00:00Z 9.6 Chordata Actinopterygii Scorpaenidae Scorpaena notata 1 2 JASF POINT (-1.65 37.35) +M2_FISH_DATA.258 258 912349190 Spain Alboran Sea Temperate Northern Atlantic AND65 Isla San Juan 37.35 -1.65 2015-09-13T14:00:00Z 9.6 Chordata Actinopterygii Tripterygiidae Tripterygion tripteronotum 1 2 JASF POINT (-1.65 37.35) +M2_FISH_DATA.259 259 912349192 Spain Alboran Sea Temperate Northern Atlantic AND66 Villaricos Norte 37.31 -1.7 2015-09-13T14:00:00Z 8.5 Chordata Actinopterygii Muraenidae Muraena helena 2 1 NSM POINT (-1.7 37.31) +M2_FISH_DATA.260 260 912349192 Spain Alboran Sea Temperate Northern Atlantic AND66 Villaricos Norte 37.31 -1.7 2015-09-13T14:00:00Z 8.5 Chordata Actinopterygii Scorpaenidae Scorpaena porcus 2 1 NSM POINT (-1.7 37.31) +M2_FISH_DATA.261 261 912349133 Spain Alboran Sea Temperate Northern Atlantic AND7 Adra 36.74 -3.01 2013-11-26T13:00:00Z 1.8 Chordata Actinopterygii Gobiidae Gobius bucchichi 1 20 JASF POINT (-3.01 36.74) +M2_FISH_DATA.262 262 912349133 Spain Alboran Sea Temperate Northern Atlantic AND7 Adra 36.74 -3.01 2013-11-26T13:00:00Z 1.8 Chordata Actinopterygii Gobiidae Gobius bucchichi 2 6 JASF POINT (-3.01 36.74) +M2_FISH_DATA.263 263 912349133 Spain Alboran Sea Temperate Northern Atlantic AND7 Adra 36.74 -3.01 2013-11-26T13:00:00Z 1.8 Chordata Actinopterygii Blenniidae Parablennius pilicornis 1 6 JASF POINT (-3.01 36.74) +M2_FISH_DATA.264 264 912349133 Spain Alboran Sea Temperate Northern Atlantic AND7 Adra 36.74 -3.01 2013-11-26T13:00:00Z 1.8 Chordata Actinopterygii Blenniidae Parablennius pilicornis 2 1 JASF POINT (-3.01 36.74) +M2_FISH_DATA.265 265 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Gobiidae Gobius bucchichi 1 2 JASF POINT (-2.46 36.83) +M2_FISH_DATA.266 266 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Gobiidae Gobius bucchichi 2 3 JASF POINT (-2.46 36.83) +M2_FISH_DATA.267 267 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Gobiidae Gobius geniporus 1 3 JASF POINT (-2.46 36.83) +M2_FISH_DATA.268 268 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Gobiidae Gobius geniporus 2 3 JASF POINT (-2.46 36.83) +M2_FISH_DATA.269 269 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Gobiesocidae Lepadogaster lepadogaster 2 2 JASF POINT (-2.46 36.83) +M2_FISH_DATA.270 270 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Blenniidae Parablennius pilicornis 1 5 JASF POINT (-2.46 36.83) +M2_FISH_DATA.271 271 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Blenniidae Parablennius pilicornis 2 5 JASF POINT (-2.46 36.83) +M2_FISH_DATA.272 272 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Scorpaenidae Scorpaena porcus 1 1 JASF POINT (-2.46 36.83) +M2_FISH_DATA.273 273 912349134 Spain Alboran Sea Temperate Northern Atlantic AND8 Almeria puerto 36.83 -2.46 2013-11-27T13:00:00Z 1.8 Chordata Actinopterygii Scorpaenidae Scorpaena porcus 2 1 JASF POINT (-2.46 36.83) +M2_FISH_DATA.274 274 912344582 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2014-07-14T14:00:00Z 3 Chordata Actinopterygii Gobiidae Gobius bucchichi 1 27 JASF POINT (-2.51 36.82) +M2_FISH_DATA.275 275 912344582 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2014-07-14T14:00:00Z 3 Chordata Actinopterygii Gobiidae Gobius bucchichi 2 27 JASF POINT (-2.51 36.82) +M2_FISH_DATA.276 276 912344582 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2014-07-14T14:00:00Z 3 Chordata Actinopterygii Gobiesocidae Lepadogaster candolii 1 1 JASF POINT (-2.51 36.82) +M2_FISH_DATA.277 277 912344582 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2014-07-14T14:00:00Z 3 Chordata Actinopterygii Blenniidae Parablennius pilicornis 1 6 JASF POINT (-2.51 36.82) +M2_FISH_DATA.278 278 912344582 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2014-07-14T14:00:00Z 3 Chordata Actinopterygii Blenniidae Parablennius pilicornis 2 14 JASF POINT (-2.51 36.82) +M2_FISH_DATA.279 279 912344582 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2014-07-14T14:00:00Z 3 Chordata Actinopterygii Scorpaenidae Scorpaena porcus 1 1 JASF POINT (-2.51 36.82) +M2_FISH_DATA.280 280 912344582 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2014-07-14T14:00:00Z 3 Chordata Actinopterygii Tripterygiidae Tripterygion delaisi 1 1 JASF POINT (-2.51 36.82) +M2_FISH_DATA.281 281 912349135 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2013-11-27T13:00:00Z 2.4 Chordata Actinopterygii Gobiidae Gobius bucchichi 1 3 JASF POINT (-2.51 36.82) +M2_FISH_DATA.282 282 912349135 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2013-11-27T13:00:00Z 2.4 Chordata Actinopterygii Gobiidae Gobius bucchichi 2 2 JASF POINT (-2.51 36.82) +M2_FISH_DATA.283 283 912349135 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2013-11-27T13:00:00Z 2.4 Chordata Actinopterygii Blenniidae Parablennius pilicornis 1 4 JASF POINT (-2.51 36.82) +M2_FISH_DATA.284 284 912349135 Spain Alboran Sea Temperate Northern Atlantic AND9 Camping 36.82 -2.51 2013-11-27T13:00:00Z 2.4 Chordata Actinopterygii Blenniidae Parablennius pilicornis 2 6 JASF POINT (-2.51 36.82) +M2_FISH_DATA.285 285 912345928 Antarctica Antarctic Peninsula Southern Ocean ANT4 End Runway -67.57 -68.13 2016-01-05T13:00:00Z 9 Chordata Actinopterygii Nototheniidae Trematomus hansoni 1 1 SM POINT (-68.13 -67.57) +M2_FISH_DATA.286 286 912346517 Antarctica Antarctic Peninsula Southern Ocean ANT5 Wharf -67.57 -68.13 2016-01-06T13:00:00Z 9 Chordata Actinopterygii Nototheniidae Notothenia coriiceps 2 1 SM POINT (-68.13 -67.57) +M2_FISH_DATA.287 287 912346517 Antarctica Antarctic Peninsula Southern Ocean ANT5 Wharf -67.57 -68.13 2016-01-06T13:00:00Z 9 Chordata Actinopterygii Nototheniidae Trematomus newnesi 1 1 SM POINT (-68.13 -67.57) +M2_FISH_DATA.288 288 912346518 Antarctica Antarctic Peninsula Southern Ocean ANT7 Trovall -67.6 -68.21 2016-02-11T13:00:00Z 12 Chordata Actinopterygii Harpagiferidae Harpagifer antarcticus 1 1 SM POINT (-68.21 -67.6) +M2_FISH_DATA.289 289 912346518 Antarctica Antarctic Peninsula Southern Ocean ANT7 Trovall -67.6 -68.21 2016-02-11T13:00:00Z 12 Chordata Actinopterygii Nototheniidae Nototheniid spp. 2 1 SM POINT (-68.21 -67.6)
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/Reel_life_survey_fish_modif2.tabular Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,30 @@ +FID Key SurveyID Country Ecoregion Realm SiteCode Site SiteLat SiteLong SurveyDate Depth Phylum Class Family Taxon Block Total Diver geom +M2_FISH_DATA.1 1 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 2 LVS POINT (151.92 -23.18) +M2_FISH_DATA.2 2 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 5 LVS POINT (151.92 -23.18) +M2_FISH_DATA.3 3 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Blenniidae Ecsenius stictus 2 8 LVS POINT (151.92 -23.18) +M2_FISH_DATA.4 4 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota guttata 1 6 LVS POINT (151.92 -23.18) +M2_FISH_DATA.5 5 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota guttata 2 9 LVS POINT (151.92 -23.18) +M2_FISH_DATA.6 6 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota hoesei 1 3 LVS POINT (151.92 -23.18) +M2_FISH_DATA.7 7 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Eviota hoesei 2 19 LVS POINT (151.92 -23.18) +M2_FISH_DATA.8 8 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon histrio 1 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.9 9 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon histrio 2 3 LVS POINT (151.92 -23.18) +M2_FISH_DATA.10 10 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon sp. [3 GA] 1 12 LVS POINT (151.92 -23.18) +M2_FISH_DATA.11 11 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Gobiidae Gobiodon spp. 2 5 LVS POINT (151.92 -23.18) +M2_FISH_DATA.12 12 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Scorpaenidae Parascorpaena aurita 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.13 13 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Tripterygiidae Ucla xenogrammus 1 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.14 14 912347736 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6 Chordata Actinopterygii Tripterygiidae Ucla xenogrammus 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.15 15 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Plesiopidae Assessor macneilli 2 20 LVS POINT (151.92 -23.18) +M2_FISH_DATA.16 16 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 1 4 LVS POINT (151.92 -23.18) +M2_FISH_DATA.17 17 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius bicolor 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.18 18 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 1 5 LVS POINT (151.92 -23.18) +M2_FISH_DATA.19 19 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius mandibularis 2 6 LVS POINT (151.92 -23.18) +M2_FISH_DATA.20 20 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius stictus 1 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.21 21 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Blenniidae Ecsenius stictus 2 3 LVS POINT (151.92 -23.18) +M2_FISH_DATA.22 22 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Tripterygiidae Enneapterygius similis 1 3 LVS POINT (151.92 -23.18) +M2_FISH_DATA.23 23 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Serranidae Epinephelus fasciatus 2 1 LVS POINT (151.92 -23.18) +M2_FISH_DATA.24 24 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota guttata 1 6 LVS POINT (151.92 -23.18) +M2_FISH_DATA.25 25 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota guttata 2 8 LVS POINT (151.92 -23.18) +M2_FISH_DATA.26 26 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota hoesei 1 7 LVS POINT (151.92 -23.18) +M2_FISH_DATA.27 27 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Eviota hoesei 2 12 LVS POINT (151.92 -23.18) +M2_FISH_DATA.28 28 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Gobiodon sp. [3 GA] 2 16 LVS POINT (151.92 -23.18) +M2_FISH_DATA.29 29 912347737 Australia Central and Southern Great Barrier Reef Central Indo-Pacific AIMS12 North Island Site 3 -23.18 151.92 2017-02-13T13:00:00Z 6.1 Chordata Actinopterygii Gobiidae Gobiodon spp. 2 7 LVS POINT (151.92 -23.18)
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/data_frenchbbs.tabular Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,851 @@ +"carre" "annee" "espece" "abond" +"440072" 2014 "ALAARV" 4 +"440072" 2014 "PARCAE" 5 +"440168" 2014 "ALAARV" 1 +"440168" 2014 "PARCAE" 10 +"440168" 2017 "ALAARV" 2 +"440168" 2017 "PARCAE" 12 +"440168" 2018 "ALAARV" 2 +"440168" 2018 "PARCAE" 20 +"440211" 2014 "ALAARV" 10 +"440211" 2014 "PARCAE" 5 +"440211" 2015 "ALAARV" 11 +"440211" 2015 "PARCAE" 6 +"440211" 2016 "ALAARV" 11 +"440211" 2016 "PARCAE" 2 +"440211" 2017 "ALAARV" 9 +"440211" 2017 "PARCAE" 2 +"440211" 2018 "ALAARV" 10 +"440211" 2018 "PARCAE" 8 +"440235" 2005 "ALAARV" 3 +"440235" 2005 "PARCAE" 15 +"440235" 2006 "ALAARV" 6 +"440235" 2006 "PARCAE" 12 +"440235" 2007 "ALAARV" 1 +"440235" 2007 "PARCAE" 10 +"440235" 2008 "ALAARV" 1 +"440235" 2008 "PARCAE" 12 +"440235" 2009 "ALAARV" 0 +"440235" 2009 "PARCAE" 13 +"440278" 2008 "ALAARV" 7 +"440278" 2008 "PARCAE" 7 +"440278" 2009 "ALAARV" 8 +"440278" 2009 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+"441311" 2015 "ALAARV" 0 +"441311" 2015 "PARCAE" 12 +"441311" 2016 "ALAARV" 0 +"441311" 2016 "PARCAE" 6 +"441311" 2017 "ALAARV" 0 +"441311" 2017 "PARCAE" 6 +"441311" 2018 "ALAARV" 0 +"441311" 2018 "PARCAE" 15 +"441340" 2004 "ALAARV" 0 +"441340" 2004 "PARCAE" 10 +"441340" 2005 "ALAARV" 0 +"441340" 2005 "PARCAE" 10 +"441340" 2006 "ALAARV" 0 +"441340" 2006 "PARCAE" 8 +"441340" 2007 "ALAARV" 0 +"441340" 2007 "PARCAE" 7 +"441340" 2008 "ALAARV" 0 +"441340" 2008 "PARCAE" 6 +"441340" 2009 "ALAARV" 0 +"441340" 2009 "PARCAE" 7 +"441340" 2010 "ALAARV" 0 +"441340" 2010 "PARCAE" 2 +"441340" 2011 "ALAARV" 0 +"441340" 2011 "PARCAE" 6 +"441340" 2012 "ALAARV" 0 +"441340" 2012 "PARCAE" 6 +"441340" 2013 "ALAARV" 0 +"441340" 2013 "PARCAE" 7 +"441340" 2014 "ALAARV" 0 +"441340" 2014 "PARCAE" 6 +"441340" 2015 "ALAARV" 0 +"441340" 2015 "PARCAE" 5 +"441376" 2014 "ALAARV" 0 +"441376" 2014 "PARCAE" 15 +"441376" 2015 "ALAARV" 0 +"441376" 2015 "PARCAE" 10 +"441376" 2016 "ALAARV" 0 +"441376" 2016 "PARCAE" 7 +"441376" 2017 "ALAARV" 0 +"441376" 2017 "PARCAE" 13 +"441376" 2018 "ALAARV" 0 +"441376" 2018 "PARCAE" 18 +"441558" 2001 "ALAARV" 2 +"441558" 2001 "PARCAE" 6 +"441558" 2002 "ALAARV" 1 +"441558" 2002 "PARCAE" 0 +"441558" 2003 "ALAARV" 1 +"441558" 2003 "PARCAE" 0 +"441558" 2004 "ALAARV" 2 +"441558" 2004 "PARCAE" 3 +"441558" 2005 "ALAARV" 1 +"441558" 2005 "PARCAE" 1 +"441558" 2006 "ALAARV" 1 +"441558" 2006 "PARCAE" 3 +"441558" 2007 "ALAARV" 2 +"441558" 2007 "PARCAE" 4 +"441558" 2008 "ALAARV" 1 +"441558" 2008 "PARCAE" 4 +"441558" 2009 "ALAARV" 1 +"441558" 2009 "PARCAE" 5 +"441558" 2011 "ALAARV" 1 +"441558" 2011 "PARCAE" 0 +"441558" 2012 "ALAARV" 0 +"441558" 2012 "PARCAE" 1 +"441594" 2004 "ALAARV" 12 +"441594" 2004 "PARCAE" 3 +"441594" 2005 "ALAARV" 9 +"441594" 2005 "PARCAE" 3 +"441594" 2006 "ALAARV" 10 +"441594" 2006 "PARCAE" 1 +"441594" 2007 "ALAARV" 5 +"441594" 2007 "PARCAE" 3 +"441594" 2008 "ALAARV" 6 +"441594" 2008 "PARCAE" 6 +"441594" 2009 "ALAARV" 1 +"441594" 2009 "PARCAE" 5 +"441640" 2012 "ALAARV" 12 +"441640" 2012 "PARCAE" 4 +"441680" 2012 "ALAARV" 2 +"441680" 2012 "PARCAE" 4 +"441680" 2013 "ALAARV" 1 +"441680" 2013 "PARCAE" 7 +"441680" 2014 "ALAARV" 0 +"441680" 2014 "PARCAE" 7 +"441680" 2015 "ALAARV" 1 +"441680" 2015 "PARCAE" 5 +"441680" 2016 "ALAARV" 0 +"441680" 2016 "PARCAE" 2 +"441680" 2017 "ALAARV" 0 +"441680" 2017 "PARCAE" 5 +"441680" 2018 "ALAARV" 0 +"441680" 2018 "PARCAE" 7 +"Ile de" 2018 "ALAARV" 3 +"Ile de" 2018 "PARCAE" 7 +"Le Mas" 2018 "ALAARV" 0 +"Le Mas" 2018 "PARCAE" 7 \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/levene.txt Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,8 @@ + +write table with levene test. +--> "Levene's Test for Homogeneity of Variance (center = median)" + Df F value Pr(>F) " +group 1 22.02 3.145e-06 ***" + 848 " +---" +Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1"
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/species.txt Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,6 @@ +Blenniidae +Gobiidae +Scorpaenidae +Tripterygiidae +Plesiopidae +Serranidae
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_bbs2.txt Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,8 @@ + +write table with levene test. +--> "Levene's Test for Homogeneity of Variance (center = median)" + Df F value Pr(>F) " +group 1 22.02 3.145e-06 ***" + 848 " +---" +Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1"
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_fish2.tabular Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,2 @@ +"x" +"1" 6
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_value_fish2.txt Tue Jul 27 16:56:39 2021 +0000 @@ -0,0 +1,10 @@ + +write table with eigenvalue. +--> " eigenvalue variance.percent cumulative.variance.percent" +Dim.1 2.849961e+00 5.699922e+01 56.99922" +Dim.2 1.229238e+00 2.458475e+01 81.58397" +Dim.3 7.482796e-01 1.496559e+01 96.54956" +Dim.4 1.725220e-01 3.450440e+00 100.00000" +Dim.5 1.948918e-14 3.897836e-13 100.00000" +Dim.6 9.545002e-34 1.909000e-32 100.00000" +Dim.7 2.137718e-35 4.275436e-34 100.00000"