Mercurial > repos > ecology > ecoregion_brt_analysis

comparison brt.R @ 7:694738eda0dc draft default tip

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planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/Ecoregionalization_workflow commit ced658540f05bb07e1e687af30a3fa4ea8e4803c
author ecology
date Wed, 28 May 2025 10:12:30 +0000
parents a56c413f3a98
children
comparison
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6:aba980404954 7:694738eda0dc
19 stop("This tool needs at least one argument") 19 stop("This tool needs at least one argument")
20 }else{ 20 }else{
21 enviro <- args[1] 21 enviro <- args[1]
22 species_files <- args[2] 22 species_files <- args[2]
23 abio_para <- args[3] 23 abio_para <- args[3]
24 dec_env <- args[8] 24 dec_env <- ifelse(args[8]=="Dot", ".", ",")
25 dec_species <- args[9] 25 dec_species <- ifelse(args[9]=="Dot", ".", ",")
26 } 26 }
27 27
28 ### load data 28 ### load data
29 29
30 env = read.table(enviro, dec = dec_env, header = TRUE, sep="\t", na.strings = "-9999") 30 env = read.table(enviro, dec = dec_env, header = TRUE, sep="\t", na.strings = "-9999")