Mercurial > repos > ecology > gdal_gdal_merge
annotate gdal_merge.xml @ 3:4285576f0690 draft default tip
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/gdal commit b8d429fc9c59d401a4a55fcd806050939ed41b8b
author | ecology |
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date | Thu, 20 Jun 2019 06:52:40 -0400 |
parents | 8bb34fcc119a |
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rev | line source |
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ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
parents:
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1 <tool id="gdal_gdal_merge" name="GDAL Merge" version="@VERSION@"> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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2 <description>mosaics a set of images</description> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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3 <macros> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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4 <import>gdal_macros.xml</import> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
parents:
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5 </macros> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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6 <expand macro="gdal_requirements" /> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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7 <command detect_errors="exit_code"><![CDATA[ |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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8 gdal_merge.py |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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9 -q |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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10 #for $i in $input |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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11 '$i' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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12 #end for |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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13 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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14 -of '$of' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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15 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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16 #if $settings.advanced=='advanced' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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17 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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18 #if str($settings.co).strip()!='' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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19 -co '$settings.co' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
parents:
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20 #end if |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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21 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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22 #if str($settings.ot).strip()!='' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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23 -ot '$settings.ot' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
parents:
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24 #end if |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
parents:
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25 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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26 #if $settings.condi_ps.pixelsize=='use_ps' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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27 -ps $settings.condi_ps.pixelsize_x $settings.condi_ps.pixelsize_y |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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28 #end if |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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29 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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30 $settings.tap |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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31 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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32 #if $settings.condi_ul_lr.ul_lr=='ul_lr' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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33 -ul_lr $settings.condi_ul_lr.ulx $settings.condi_ul_lr.uly $settings.condi_ul_lr.lrx $settings.condi_ul_lr.lry |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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34 #end if |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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35 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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36 $settings.v |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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37 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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38 $settings.separate |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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39 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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40 $settings.pct |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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41 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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42 #if $settings.n!='nodata_value' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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43 -n '$settings.n' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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44 #end if |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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45 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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46 #if $settings.a_nodata!='output_nodata_value' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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47 -a_nodata '$settings.a_nodata' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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48 #end if |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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49 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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50 #if str($settings.init).strip()!='' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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51 -init '$settings.init' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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52 #end if |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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53 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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54 #end if |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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55 |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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56 -o '$output' |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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57 ]]></command> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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58 <inputs> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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59 <expand macro="gdal_input_raster_multiple"/> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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60 <expand macro="gdal_param_of"/> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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61 <conditional name="settings"> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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62 <expand macro="gdal_advanced_params_select"/> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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63 <when value="advanced"> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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64 <expand macro="gdal_param_co"/> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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65 <expand macro="gdal_param_ot"/> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
parents:
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66 <conditional name="condi_ps"> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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67 <param label="Fix pixel size to be used" help="-ps pixelsize_x pixelsize_y. If not specified the resolution of the first input file will be used" name="pixelsize" type="select"> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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68 <option value="use_ps">Fix pixel size with the -ps option</option> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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69 <option value="no_ps" selected="true">Don't specify a resolution</option> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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70 </param> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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71 <when value="use_ps"> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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72 <param name="pixelsize_x" type="integer" value="0" min="0"/> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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73 <param name="pixelsize_y" type="integer" value="0" min="0"/> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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74 </when> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
parents:
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75 <when value="no_ps"> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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76 </when> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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77 </conditional> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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78 <expand macro="gdal_param_tap"/> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
parents:
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79 <conditional name="condi_ul_lr"> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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80 <param name="ul_lr" type="select" argument="-ul_lr ulx uly lrx lry" label="The extents of the output file" help="If not specified the aggregate extents of all input files will be used" > |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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81 <option value="no_ul_lr" selected="true">Don't use the -ul_lr option</option> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
ecology
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82 <option value="ul_lr">Use the -ul_lr option</option> |
ce7826d49a5c
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83 </param> |
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84 <when value="no_ul_lr"> |
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85 </when> |
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86 <when value="ul_lr"> |
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87 <param name="ulx" type="integer" label="The ulx extents of the output file" value="0" min="0"/> |
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88 <param name="uly" type="integer" label="The uly extents of the output file" value="0" min="0"/> |
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89 <param name="lrx" type="integer" label="The lrx extents of the output file" value="0" min="0"/> |
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planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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90 <param name="lry" type="integer" label="The lry extents of the output file" value="0" min="0"/> |
ce7826d49a5c
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91 </when> |
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92 </conditional> |
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93 <param name="v" type="boolean" truevalue="-v" falsevalue="" checked="false" help="-v" label="Generate verbose output of mosaicing operations as they are done" /> |
ce7826d49a5c
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94 <expand macro="gdal_param_separate"/> |
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95 <param name="pct" type="boolean" truevalue="-pct" falsevalue="" checked="false" help="-pct. Merging pseudo-colored images this way assumes that all input files use the same color table" label="Grab a pseudo-color table from the first input image" /> |
ce7826d49a5c
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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96 <param name="n" type="text" argument="-n nodata_value" label="Ignore pixels from files being merged in with this pixel value" value="nodata_value" /> |
ce7826d49a5c
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97 <param name="a_nodata" type="text" argument="-a_nodata" label="Assign a specified nodata value to output bands" value="output_nodata_value" /> |
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98 <param name="init" type="text" help="-init values(s). It is not marked as the nodata value in the output file. If only one value is given, the same value is used in all the bands" label="Pre-initialize the output image bands with values" value="" /> |
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99 </when> |
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100 </conditional> |
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101 </inputs> |
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102 <outputs> |
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103 <expand macro="gdal_output_change_format"/> |
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104 </outputs> |
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105 <tests> |
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106 <test> |
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107 <param name="input" value="small_west.dem,small_east.dem"/> |
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108 <param name="advanced" value="simple"/> |
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109 <output name="output" file="small_merged.tif"/> |
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110 </test> |
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111 </tests> |
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112 <help><![CDATA[ |
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113 ========================== |
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114 Gdal_merge |
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115 ========================== |
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116 **What it does** |
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117 |
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118 This utility will automatically mosaic a set of images. All the images must be in the same coordinate system and have a matching number of bands, but they may be overlapping, and at different resolutions. In areas of overlap, the last image will be copied over earlier ones. |
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119 |
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120 | |
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121 |
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122 **How to use it** |
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123 |
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124 Select as much raster files as you want from history to make the mosaic. |
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125 |
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126 Specifiy output format using short name (http://www.gdal.org/formats_list.html). |
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127 |
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128 | |
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129 |
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130 **Advanced options and sources** |
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131 |
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132 To see complete details and help section please check the official gdal sources. |
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133 |
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134 http://www.gdal.org |
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135 |
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136 http://www.gdal.org/gdal_merge.html |
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137 |
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138 Raster Processing Tutorial : https://trac.osgeo.org/gdal/wiki/UserDocs/RasterProcTutorial |
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139 ]]></help> |
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140 <expand macro="gdal_citation"/> |
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141 </tool> |