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comparison pampa_macros.xml @ 5:8db02073b671 draft

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"planemo upload for repository https://github.com/ColineRoyaux/PAMPA-Galaxy commit cd938a05cb066b16f2518159fa0ff5e3ed8a2b2b"
author ecology
date Mon, 26 Apr 2021 16:05:19 +0000
parents 44b9069775ca
children b40fecef616b
comparison
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4:44b9069775ca 5:8db02073b671
13 <requirement type="package" version="0.3.3.0">r-dharma</requirement> 13 <requirement type="package" version="0.3.3.0">r-dharma</requirement>
14 </requirements> 14 </requirements>
15 </xml> 15 </xml>
16 <xml name="Plot_requirements"> 16 <xml name="Plot_requirements">
17 <requirements> 17 <requirements>
18 <requirement type="package" version="3.1.1">r-ggplot2</requirement> 18 <requirement type="package" version="3.3.3">r-ggplot2</requirement>
19 <requirement type="package" version="1.3_25">r-boot</requirement> 19 <requirement type="package" version="1.3_25">r-boot</requirement>
20 </requirements> 20 </requirements>
21 </xml> 21 </xml>
22 <xml name="pampa_input_calculate"> 22 <xml name="pampa_input_calculate">
23 <param name="input" type="data" format="tabular" label="Input file" help="Observation data file, with location, year, species and abundance."/> 23 <param name="input" type="data" format="tabular" label="Input file" help="Observation data file, with location, year, species and abundance."/>
52 </when> 52 </when>
53 </xml> 53 </xml>
54 <xml name="pampa_input_GLM"> 54 <xml name="pampa_input_GLM">
55 <param name="input_metric" type="data" format="tabular" label="Input metrics file" help="Metrics data file, with location, year, and metrics informations that can be used as interest variable."/> 55 <param name="input_metric" type="data" format="tabular" label="Input metrics file" help="Metrics data file, with location, year, and metrics informations that can be used as interest variable."/>
56 <param name="input_unitobs" type="data" format="tabular" label="Unitobs informations file" help="Unitobs file, with all informations available about unitobs."/> 56 <param name="input_unitobs" type="data" format="tabular" label="Unitobs informations file" help="Unitobs file, with all informations available about unitobs."/>
57 <param name="varint" type="data_column" data_ref="input_metric" label="Interest variable from metrics file" help= "Choose the field of the interest variable."/> 57 <param name="varint" type="data_column" data_ref="input_metric" use_header_names="true" label="Interest variable from metrics file" help= "Choose the field of the interest variable."/>
58 </xml> 58 </xml>
59 <xml name="pampa_var_GLM"> 59 <xml name="pampa_var_GLM">
60 <param name="varrep" type="select" label="Response variables" help= "Choose the response variables you want to include in your analysis." multiple="true"> 60 <param name="varrep" type="select" label="Response variables" help= "Choose the response variables you want to include in your analysis." multiple="true">
61 <option selected="true" value="year">Year</option> 61 <option selected="true" value="year">Year</option>
62 <option selected="true" value="site">Site</option> 62 <option selected="true" value="site">Site</option>