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comparison PAMPA_GLM.xml @ 6:b40fecef616b draft default tip

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"planemo upload for repository https://github.com/ColineRoyaux/PAMPA-Galaxy commit 65ab5b6fe84871db0fe18244d805cea19a44e830"
author ecology
date Sat, 26 Jun 2021 07:20:12 +0000
parents 8db02073b671
children
comparison
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5:8db02073b671 6:b40fecef616b
102 102
103 This tool from PAMPA toolsuite computes Generalized Linear Models on community data. 103 This tool from PAMPA toolsuite computes Generalized Linear Models on community data.
104 104
105 It allows user to choose composition of the model : 105 It allows user to choose composition of the model :
106 106
107 - Interest variable among numeric or integer variables of the input file 107 - Response variable among numeric or integer variables of the input file
108 108
109 - Response variables among year, site and/or habitat 109 - Explanatory variables among year, site and/or habitat
110 110
111 - Allocation of random effect on year and/or site 111 - Allocation of random effect on year and/or site
112 112
113 - (optional) Separation factor to compute several GLMs 113 - (optional) Separation factor to compute several GLMs
114 114
140 | ... | ... | ... | ... | ... | 140 | ... | ... | ... | ... | ... |
141 +------+----------+---------+---------+-----+ 141 +------+----------+---------+---------+-----+
142 142
143 The first input may be extracted from the 'Calculate community metrics' tool. 143 The first input may be extracted from the 'Calculate community metrics' tool.
144 144
145 A tabular file with observation unit data which contains at least as much columns as used response variables and separation factor in addition with the 'observation.unit' column. 145 A tabular file with observation unit data which contains at least as much columns as used explanatory variables and separation factor in addition with the 'observation.unit' column.
146 146
147 +----------------------+---------+--------+------------+-----+ 147 +----------------------+---------+--------+------------+-----+
148 | observation.unit | site | year | habitat | ... | 148 | observation.unit | site | year | habitat | ... |
149 +======================+=========+========+============+=====+ 149 +======================+=========+========+============+=====+
150 | year_locationID | site ID | 2000 | habitatID | ... | 150 | year_locationID | site ID | 2000 | habitatID | ... |