Mercurial > repos > ecology > pampa_presabs
diff pampa_macros.xml @ 3:8d8aec182fb1 draft
"planemo upload for repository https://github.com/ColineRoyaux/PAMPA-Galaxy commit 04381ca7162ec3ec68419e308194b91d11cacb04"
author | ecology |
---|---|
date | Mon, 16 Nov 2020 11:02:09 +0000 |
parents | c9dfe4e20a45 |
children | 07b081730994 |
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--- a/pampa_macros.xml Mon Jul 27 09:46:51 2020 -0400 +++ b/pampa_macros.xml Mon Nov 16 11:02:09 2020 +0000 @@ -1,5 +1,5 @@ <macros> - <token name="@VERSION@">0.0.1</token> + <token name="@VERSION@">0.0.2</token> <xml name="Pampa_requirements"> <requirements> <requirement type="package" version="1.0.2">r-tidyr</requirement> @@ -10,11 +10,13 @@ <requirement type="package" version="1.2.2">r-gap</requirement> <requirement type="package" version="1.0.1">r-glmmtmb</requirement> <requirement type="package" version="1.4_13">r-multcomp</requirement> + <requirement type="package" version="0.3.3.0">r-dharma</requirement> </requirements> </xml> <xml name="Plot_requirements"> <requirements> <requirement type="package" version="3.1.1">r-ggplot2</requirement> + <requirement type="package" version="1.3_25">r-boot</requirement> </requirements> </xml> <xml name="pampa_input_calculate"> @@ -46,6 +48,7 @@ <option value="quasibinomial">Quasi-Binomial</option> <option value="Gamma">Gamma</option> </param> + <param name="rdata" type="boolean" checked="yes" label="GLM object(s) as .Rdata output ?"/> </when> </xml> <xml name="pampa_input_GLM"> @@ -67,6 +70,10 @@ <xml name="pampa_output_GLM"> <data name="output_recap" from_work_dir="GLMSummaryFull.txt" format="txt" label="Simple statistics on chosen variables on ${on_string}"/> <data name="output_rate" from_work_dir="RatingGLM.txt" format="txt" label="Your analysis rating file on ${on_string}"/> + <collection type="list" name="output_GLM"> + <discover_datasets pattern="(?P<designation>.+)\.Rdata" visible="false" format="Rdata"/> + <filter> settings['advanced'] == 'advanced' and settings['rdata']</filter> + </collection> </xml> <xml name="pampa_bibref"> <citations>