Mercurial > repos > ecology > xarray_netcdf2netcdf
view macros_netcdf2netcdf.xml @ 3:c91c27b63fb2 draft default tip
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/data_manipulation/xarray/ commit fd8ad4d97db7b1fd3876ff63e14280474e06fdf7
author | ecology |
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date | Sun, 31 Jul 2022 21:20:00 +0000 |
parents | e87073edecd6 |
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<macros> <xml name="coord_range"> <repeat name="user_choice" title="Filter by coordinate values" min="0" max="20" help="Use this option to filter on the values of the selected coordinate"> <param name="dim" type="select" label="Dimensions"> <options from_dataset="var_tab"> <column name="value" index="0"/> </options> </param> <conditional name="condi_between"> <param name="comparator" type="select" label="Comparator"> <option value="is">is</option> <option value="from">from</option> <option value="to">to</option> <option value="sl">slice(threshold1,threshold2)</option> </param> <when value="sl"> <param name="t1" type="text" value="" label="Choose the start value for slice"/> <param name="t2" type="text" value="" label="Choose the end value for slice"/> </when> <when value="to"> <param name="value" type="text" value="" label="Choose the end value"/> </when> <when value="from"> <param name="value" type="text" value="" label="Choose the start value"/> </when> <when value="is"> <param name="value" type="text" value="" label="Choose the value to select"/> <yield /> </when> </conditional> </repeat> </xml> <xml name="section_variables"> <section name="variable" title="Select variables"> <param name="var" type="select" multiple="true" label="Choose variables to extract"> <options from_dataset="var_tab"> <column name="name" index="0"/> <column name="value" index="0"/> </options> </param> <param type="float" name="scale" optional="true" help="scale factor (float) to apply to the selected variable (optional and only if a variable is selected)"/> <param name="write_all" type="boolean" checked="false" label="Write all variables to new netCDF file (only if a variable is selected)"/> <param name="keep_attributes" type="boolean" checked="true" label="Keep all attributes (only if a variable is selected)"/> </section> </xml> <xml name="section_coords"> <section name="subset_coords" title="Subset by coordinates"> <conditional name="tsel"> <param name="by_click" type="select" optional="true" label="Coordinate values"> <option value="sel">Coordinate values (sel)</option> <option value="isel">Coordinate indices (isel)</option> <option value="isel_list" selected="true">Coordinate values from list</option> </param> <when value="sel"> <expand macro="coord_range"> <param name="method" type="select" multiple="false" label="Choose selection method"> <option value="None">only exact matches</option> <option value="nearest">use nearest valid index value</option> <option value="pad">propagate last valid index value forward</option> <option value="backfill">propagate next valid index value backward</option> </param> </expand> </when> <when value="isel"> <expand macro="coord_range"/> </when> <when value="isel_list"> <repeat name="user_choice" title="Filter by coordinate values" min="0" max="20" help="Use this option to filter on the values of the selected coordinate"> <param name="dim" type="select" label="Dimensions"> <options from_dataset="var_tab"> <column name="value" index="0"/> </options> </param> <param type="data" label="Tabular containing values of this dimension" name="dim_tab" format="tabular" help="File containing values for this dimension."/> <conditional name="condi_between"> <param name="comparator" type="select" label="Comparator"> <option value="is">is</option> <option value="from">from</option> <option value="to">to</option> <option value="sl">slice(threshold1,threshold2)</option> </param> <when value="sl"> <param name="t1" type="select" multiple="false" label="Choose the start value for slice"> <options from_dataset="dim_tab"> <column name="name" index="1"/> <column name="value" index="0"/> </options> </param> <param name="t2" type="select" multiple="false" label="Choose the end value for slice"> <options from_dataset="dim_tab"> <column name="name" index="1"/> <column name="value" index="0"/> </options> </param> </when> <when value="is"> <param name="value" type="select" multiple="false" label="Choose the value to select"> <options from_dataset="dim_tab"> <column name="name" index="1"/> <column name="value" index="0"/> </options> </param> </when> <when value="to"> <param name="value" type="select" multiple="false" label="Choose the end value"> <options from_dataset="dim_tab"> <column name="name" index="1"/> <column name="value" index="0"/> </options> </param> </when> <when value="from"> <param name="value" type="select" multiple="false" label="Choose the start value"> <options from_dataset="dim_tab"> <column name="name" index="1"/> <column name="value" index="0"/> </options> </param> </when> </conditional> </repeat> </when> </conditional> </section> </xml> <xml name="section_where"> <section name="mask_values" title="Advanced options to mask by values"> <conditional name="mask_condi"> <param name="mask_option" type="select" multiple="false" label="Option for masked values"> <option value="keep" selected="true">Fill with NA</option> <option value="drop">Drop values</option> <option value="other">Set constant</option> </param> <when value="keep"/> <when value="drop"/> <when value="other"> <param name="set_other" type="float" value="0" label="Value to use for locations in this object where cond is False." /> </when> </conditional> <param name="where_condition" type="data" optional="true" format="txt" label="file containing a where expression" /> </section> </xml> </macros>