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comparison xarray_select.xml @ 4:b393815e4cb7 draft default tip

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planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/data_manipulation/xarray/ commit fd8ad4d97db7b1fd3876ff63e14280474e06fdf7
author ecology
date Sun, 31 Jul 2022 21:20:41 +0000
parents bf595d613af4
children
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3:bf595d613af4 4:b393815e4cb7
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="edam_ontology"/> 6 <expand macro="edam_ontology"/>
7 <requirements> 7 <requirements>
8 <requirement type="package" version="@TOOL_VERSION@">xarray</requirement> 8 <requirement type="package" version="@TOOL_VERSION@">xarray</requirement>
9 <requirement type="package" version="3">python</requirement> 9 <requirement type="package" version="3.10">python</requirement>
10 <requirement type="package" version="1.5.6">netcdf4</requirement> 10 <requirement type="package" version="1.8.2">shapely</requirement>
11 <requirement type="package" version="0.9.0">geopandas</requirement> 11 <requirement type="package" version="1.6.0">netcdf4</requirement>
12 <requirement type="package" version="1.7.1">shapely</requirement> 12 <requirement type="package" version="1.4.3">pandas</requirement>
13 <requirement type="package" version="0.7.0">geopandas</requirement>
13 </requirements> 14 </requirements>
14 <command detect_errors="exit_code"><![CDATA[ 15 <command detect_errors="exit_code"><![CDATA[
15 mkdir output_dir && 16 mkdir output_dir &&
16 #if $condi_source_coord.coord_source=="coord_from_file" 17 #if $condi_source_coord.coord_source=="coord_from_file"
17 echo "Galaxy xarray version @TOOL_VERSION@"> output_dir/version.tabular && 18 echo "Galaxy xarray version @TOOL_VERSION@"> output_dir/version.tabular &&
18 #end if 19 #end if
19 python '$__tool_directory__/xarray_tool.py' '$input' --select '$var' 20 python '$__tool_directory__/xarray_select.py' '$input' --select '$var'
20 --verbose 21 --verbose
21 --filter 22 --filter
22 #for $i,$uc in enumerate($user_choice) 23 #for $i,$uc in enumerate($user_choice)
23 #if $uc.condi_between.comparator=="bi" 24 #if $uc.condi_between.comparator=="bi"
24 '${uc.dim}#${uc.condi_between.comparator}#${uc.condi_between.t1}#${uc.condi_between.t2}' 25 '${uc.dim}#${uc.condi_between.comparator}#${uc.condi_between.t1}#${uc.condi_between.t2}'