Mercurial > repos > edward-kirton > roche454_toolsuite

diff roche454/runMapping_cDNA_wrapper.pl @ 1:368a6ebebdde

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Migrated tool version 1.0.1 from old tool shed archive to new tool shed repository
author edward-kirton
date Tue, 07 Jun 2011 17:51:04 -0400
parents f036c7107601
children
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--- a/roche454/runMapping_cDNA_wrapper.pl	Tue Jun 07 17:50:32 2011 -0400
+++ b/roche454/runMapping_cDNA_wrapper.pl	Tue Jun 07 17:51:04 2011 -0400
@@ -9,11 +9,11 @@
 my $alignment_info=shift @ARGV;
 my $all_contigs_fasta=shift @ARGV;
 my $all_contigs_qual=shift @ARGV;
-my $all_diffs=shift @ARGV
-my $all_struct_vars=shift @ARGV
-my $hc_diff=shift @ARGV
-my $hc_struct_vars=shift @ARGV
-my $mapping_qc=shift @ARGV
+my $all_diffs=shift @ARGV;
+my $all_struct_vars=shift @ARGV;
+my $hc_diff=shift @ARGV;
+my $hc_struct_vars=shift @ARGV;
+my $mapping_qc=shift @ARGV;
 my $newbler_metrics=shift @ARGV;
 my $pair_align=shift @ARGV;
 my $read_status=shift @ARGV;