Mercurial > repos > enios > nc_rna

comparison lncadeep.xml @ 2:0980d96fe692 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author enios
date Wed, 21 Apr 2021 10:53:31 +0000
parents
children
comparison
equal deleted inserted replaced
1:17a9bf6ca902 2:0980d96fe692
1 <tool id="lncadeep" name="LncADeep" >
2 <description>"LncADeep"</description>
3 <requirements>
4 <container type="docker">bianca7/lncadeep</container>
5 </requirements>
6 <command><![CDATA[python /usr/local/lib/python2.7/site-packages/LncADeep/LncADeep.py -MODE anno
7 -o test
8 -l $RNA_FILE
9 -p $PROTEIN_FILE
10 -a 1
11 && tar -cvf results.tar test_LncADeep_anno_results && mv results.tar $results
12 ]]></command>
13 <inputs>
14 <param type="data" name="RNA_FILE" format="fasta" label="RNA sequences in FASTA format" />
15 <param type="data" name="PROTEIN_FILE" format="fasta" label="protein sequences in FASTA format" />
16 </inputs>
17 <outputs>
18 <data name="results" format="tar" />
19 </outputs>
20 </tool>