Mercurial > repos > enios > nc_rna
comparison discardfasta.xml @ 15:97abe4dc3ee3 draft
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| author | enios |
|---|---|
| date | Sat, 22 May 2021 07:30:24 +0000 |
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| children |
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| 14:fad6c1077c8c | 15:97abe4dc3ee3 |
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| 1 <tool id="discardfasta" name="discardFasta" > | |
| 2 <description>"discard_fasta_sequences_less_than_specific_length"</description> | |
| 3 <requirements> | |
| 4 <container type="docker">bianca7/lncrna:discard_fasta</container> | |
| 5 </requirements> | |
| 6 <command><![CDATA[perl /discard_fasta.pl $length $fasta_file > $out | |
| 7 ]]></command> | |
| 8 <inputs> | |
| 9 <param type="data" name="fasta_file" format="fasta" /> | |
| 10 <param type="integer" value="200" name="length" label="length cut off" /> | |
| 11 </inputs> | |
| 12 <outputs> | |
| 13 <data name="out" format="fasta" /> | |
| 14 </outputs> | |
| 15 </tool> | |
| 16 | |
| 17 |