Mercurial > repos > erasmus-medical-center > dr_disco

annotate test-data/classify_test_16.test-02.out.dbed @ 11:3743fd602fa9 draft default tip

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit 183cebdfe3a34204fd8aa1c6dce6bf6514b94c2d
author erasmus-medical-center
date Fri, 03 Nov 2017 07:23:57 -0400
parents f2c70d589596
children
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10
f2c70d589596 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit 3b03a60c8a46cc23f6fbbb9e32111b39c6044fad
erasmus-medical-center
parents: 9
diff changeset
1 chr-A pos-A direction-A pos-A-acceptor pos-A-donor chr-B pos-B direction-B pos-B-acceptor pos-B-donor genomic-distance filter-status circRNA intronic/exonic score soft+hardclips n-split-reads n-discordant-reads alignment-score mismatches n-edges n-nodes-A n-nodes-B n-splice-junc-A n-splice-junc-B entropy-bp-edge entropy-all-edges bp-pos-stddev entropy-disco-bps lr-A-slope lr-A-intercept lr-A-rvalue lr-A-pvalue lr-A-stderr lr-B-slope lr-B-intercept lr-B-rvalue lr-B-pvalue lr-B-stderr disco/split clips/score nodes/edge median-AS-A median-AS-B max-AS-A max-AS-B data-structure
f2c70d589596 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit 3b03a60c8a46cc23f6fbbb9e32111b39c6044fad
erasmus-medical-center
parents: 9
diff changeset
2 chr21 39817544 - 140 0 chr21 42880007 + 0 140 3062463 valid linear exonic 253 170 85 6 10000 0 5 2 4 1 0 0.8111 0.8497 0 0.9535 0.7247 63.7843 0.844 0 0.0559 0.3651 17.303 0.8378 0 0.0289 0.0706 0.336 1.2 50 50 50 50 chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
f2c70d589596 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit 3b03a60c8a46cc23f6fbbb9e32111b39c6044fad
erasmus-medical-center
parents: 9
diff changeset
3 chr21 39877811 - 98 0 chr21 42873374 + 0 98 2995563 valid linear intronic 91 42 21 28 10000 0 1 1 1 0 0 0.9528 0.9528 0 0.82 2.9207 17.3314 0.9125 0 0.191 1.588 68.1747 0.8769 0 0.1269 1.3333 0.2308 2 50 50 50 50 chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)